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The map label for this gene is 116621694

Identifier: 116621694

GI number: 116621694

Start: 3257111

End: 3258676

Strand: Reverse

Name: 116621694

Synonym: Acid_2576

Alternate gene names: NA

Gene position: 3258676-3257111 (Counterclockwise)

Preceding gene: 116621695

Following gene: 116621693

Centisome position: 32.7

GC content: 60.54

Gene sequence:

>1566_bases
ATGAGTTCCTTGTCCACCGCGGAATTGACCCGGCTGGAACGCTTTCTTGGCGCCCACGATAGCCGTTTTGCGCTGGCGCT
GGTTCGCATGCCGCAGACTCCGCAGCGCGAAGAATTCGCGCGCCGGCTCCAGGAATTCAGCGGCGAGCAGCAGCGTCCGT
TCCACCGCTTCGATCTTGCGGGCCTTGGAACCGGTGAGGTCTGGGGCAAAGTCGAGCAAGGGCTGCCGGTGGGAACGATC
GCGATCCTAGAGGGTTTGGACGAGAGCTTCAATCATCCCGATGGCCAGATGGCGTCCTTCCTAAACCGCCAGCGCGAGCG
GATTGCTGAACTGTTGCCCGGCCCCGTGCTGCTGGTGCTCGGTGATCGGGCGATGGATCGATTCTTCACTGACGCACCCG
ACCTGGCGGATTGGTATGCGGCGAGTTTCGAATTCTCGGCCACTGCAAGCGCCGCGCCGGCACAGGACGACGGCTCGATC
CCGGAGAACTCCAGCGAATGGATCGAATCGCGCATGTCGTTGCTGCGGGCTCAATTGCAAGCGGACGTGCCCGACCGGAT
TAAAGCGCGTATCCTGCGTGAACTGGCTCTTTTGTATCGCGATTCGGTTTATGGGGTGCCAATGGATCCCGATCGGGTTC
GCACGCGAAGCGCATCGGAGAGTCTTGGGGCTGCCGAAGTAATGGCCCAAGAAGCCGTCGAAATACAGCGGAGCCTCGCA
TTGAAAGATACCTCCGCGGATCAGGCACGGGAACTGGCGCTCGCGCTAAACGTTCAGGGGAGTTTGCTGCAGGAGTCCGG
GCGTTATGCGGAAGCGGAACCACTGGCGAAAGAGGCCTTGGAAATCAGGAAGCGTGTTTTGGGAGAAGAGCATCCGGACA
CCATCCGCTCCCAAAATAATTTGGCGGGGCTGTATCAGAGGATGGGACGGTATGCGGAAGCTGAACCGCTATACCGGAAT
GCCCTCGCCACCCGGGAGCGCCTCCGCGGCGCGGAGCATCCCGACACGCTTAAAGTGGTCAATAATCTGGCAAGCCTGTA
CGCCGAGCAAGGACAATTCGCGCAGGCAGAGCCCTTGTACCTGCGGGCGCTTCACGGGCGGAAAAAGCTGTTGGGCGAGG
AGCACCCGGAGACGCTCAATTCGCTGAACAATCTAGCCCAGCTTTACGAACGCTATCAACGCTATGCGGAAGCAGAGCCC
TTGTACCTGCGGACCGTCGCCGCCAGGGAACGGCTCCTGGGGAGGGACCACCCCTACACGCTCAATTCGCTGAATAATCT
GGCCAACCTATATGCAAGGCAGCAGCGGTATAAGGAAGCGCTGCCACTCTACCGGCAGGTTCTGACCGTCCGAGAACGGG
TTCTCGGACCGGAACATCCCAGTACGCTGAGTTCGCTGAACAACCTCGCGTTTCTCTACGCCCGGCAACGGCGTTACAAC
AAAGCCGAACCGTTGTACCGGCGGGCGATCAGTGGCGCCGAGAAAGTGCTGGGGCACGATCATCCCGAGACCCGGCTCTT
TCGTGAGAACCTTGAAGCGCTGCGGGAACCAAGGCCTGGCCTCTGA

Upstream 100 bases:

>100_bases
ATAACGGCGAAGGCTGATACGATTTCCATCCCCTGCTGGATAACTACGCTCCCGTGAAAGAAGCAGTGGAGGCGGCGCGC
AGGGTAAACGCTGCGTAATA

Downstream 100 bases:

>100_bases
AGCCTCTGACATCACACTCGACATTTGGCCCCTCGTTTGCTATGCTGATAGCTACATCAATTGTGATACTCCTGCCCGAT
ACCCTAACTCACCCGACGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family; Tetratricopeptide Repeat Family Protein; Kinesin Light Chain; Serine/Threonine Protein Kinase; NB-ARC Domain Protein; NB-ARC Domain-Containing Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; Serine/Threonine Kinase Family Protein; Nb-Arc; TPR Domain-Containing Protein; Sigma-70 Region 2 Domain Protein; TPR Domain Family Protein; Serine/Threonine-Protein Kinase; SEC-C Motif Domain Protein; TIR Protein; Serine/Threonine Protein Kinase With TPR Repeats; Ankyrin Repeat Domain Protein; Tetratricopeptide Tpr_3 Repeat-Containing Protein; Helix-Turn-Helix Psq Domain Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein; Protein Kinase; Tetratricopeptide TPR4 Domain-Containing Protein; Sel1 Domain-Containing Protein; Peptidase-Like

Number of amino acids: Translated: 521; Mature: 520

Protein sequence:

>521_residues
MSSLSTAELTRLERFLGAHDSRFALALVRMPQTPQREEFARRLQEFSGEQQRPFHRFDLAGLGTGEVWGKVEQGLPVGTI
AILEGLDESFNHPDGQMASFLNRQRERIAELLPGPVLLVLGDRAMDRFFTDAPDLADWYAASFEFSATASAAPAQDDGSI
PENSSEWIESRMSLLRAQLQADVPDRIKARILRELALLYRDSVYGVPMDPDRVRTRSASESLGAAEVMAQEAVEIQRSLA
LKDTSADQARELALALNVQGSLLQESGRYAEAEPLAKEALEIRKRVLGEEHPDTIRSQNNLAGLYQRMGRYAEAEPLYRN
ALATRERLRGAEHPDTLKVVNNLASLYAEQGQFAQAEPLYLRALHGRKKLLGEEHPETLNSLNNLAQLYERYQRYAEAEP
LYLRTVAARERLLGRDHPYTLNSLNNLANLYARQQRYKEALPLYRQVLTVRERVLGPEHPSTLSSLNNLAFLYARQRRYN
KAEPLYRRAISGAEKVLGHDHPETRLFRENLEALREPRPGL

Sequences:

>Translated_521_residues
MSSLSTAELTRLERFLGAHDSRFALALVRMPQTPQREEFARRLQEFSGEQQRPFHRFDLAGLGTGEVWGKVEQGLPVGTI
AILEGLDESFNHPDGQMASFLNRQRERIAELLPGPVLLVLGDRAMDRFFTDAPDLADWYAASFEFSATASAAPAQDDGSI
PENSSEWIESRMSLLRAQLQADVPDRIKARILRELALLYRDSVYGVPMDPDRVRTRSASESLGAAEVMAQEAVEIQRSLA
LKDTSADQARELALALNVQGSLLQESGRYAEAEPLAKEALEIRKRVLGEEHPDTIRSQNNLAGLYQRMGRYAEAEPLYRN
ALATRERLRGAEHPDTLKVVNNLASLYAEQGQFAQAEPLYLRALHGRKKLLGEEHPETLNSLNNLAQLYERYQRYAEAEP
LYLRTVAARERLLGRDHPYTLNSLNNLANLYARQQRYKEALPLYRQVLTVRERVLGPEHPSTLSSLNNLAFLYARQRRYN
KAEPLYRRAISGAEKVLGHDHPETRLFRENLEALREPRPGL
>Mature_520_residues
SSLSTAELTRLERFLGAHDSRFALALVRMPQTPQREEFARRLQEFSGEQQRPFHRFDLAGLGTGEVWGKVEQGLPVGTIA
ILEGLDESFNHPDGQMASFLNRQRERIAELLPGPVLLVLGDRAMDRFFTDAPDLADWYAASFEFSATASAAPAQDDGSIP
ENSSEWIESRMSLLRAQLQADVPDRIKARILRELALLYRDSVYGVPMDPDRVRTRSASESLGAAEVMAQEAVEIQRSLAL
KDTSADQARELALALNVQGSLLQESGRYAEAEPLAKEALEIRKRVLGEEHPDTIRSQNNLAGLYQRMGRYAEAEPLYRNA
LATRERLRGAEHPDTLKVVNNLASLYAEQGQFAQAEPLYLRALHGRKKLLGEEHPETLNSLNNLAQLYERYQRYAEAEPL
YLRTVAARERLLGRDHPYTLNSLNNLANLYARQQRYKEALPLYRQVLTVRERVLGPEHPSTLSSLNNLAFLYARQRRYNK
AEPLYRRAISGAEKVLGHDHPETRLFRENLEALREPRPGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI34304360, Length=313, Percent_Identity=33.8658146964856, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI194306559, Length=206, Percent_Identity=39.8058252427184, Blast_Score=149, Evalue=5e-36,
Organism=Homo sapiens, GI33620730, Length=206, Percent_Identity=39.8058252427184, Blast_Score=149, Evalue=5e-36,
Organism=Homo sapiens, GI110735431, Length=206, Percent_Identity=39.8058252427184, Blast_Score=149, Evalue=6e-36,
Organism=Homo sapiens, GI198041734, Length=212, Percent_Identity=39.622641509434, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI198041731, Length=212, Percent_Identity=39.622641509434, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI12383062, Length=212, Percent_Identity=39.622641509434, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI41871960, Length=183, Percent_Identity=43.1693989071038, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI41871955, Length=206, Percent_Identity=39.8058252427184, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI41871946, Length=206, Percent_Identity=39.8058252427184, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI198041728, Length=212, Percent_Identity=39.622641509434, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI91825557, Length=201, Percent_Identity=40.7960199004975, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI18104962, Length=153, Percent_Identity=32.6797385620915, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI19923891, Length=89, Percent_Identity=42.6966292134831, Blast_Score=67, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71984535, Length=278, Percent_Identity=35.2517985611511, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI71984524, Length=259, Percent_Identity=36.2934362934363, Blast_Score=152, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI71984527, Length=259, Percent_Identity=36.2934362934363, Blast_Score=152, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI71984517, Length=259, Percent_Identity=36.2934362934363, Blast_Score=152, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI17541458, Length=200, Percent_Identity=31.5, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI17647555, Length=206, Percent_Identity=41.747572815534, Blast_Score=154, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59004; Mature: 58873

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLSTAELTRLERFLGAHDSRFALALVRMPQTPQREEFARRLQEFSGEQQRPFHRFDLA
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCC
GLGTGEVWGKVEQGLPVGTIAILEGLDESFNHPDGQMASFLNRQRERIAELLPGPVLLVL
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
GDRAMDRFFTDAPDLADWYAASFEFSATASAAPAQDDGSIPENSSEWIESRMSLLRAQLQ
CCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ADVPDRIKARILRELALLYRDSVYGVPMDPDRVRTRSASESLGAAEVMAQEAVEIQRSLA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKDTSADQARELALALNVQGSLLQESGRYAEAEPLAKEALEIRKRVLGEEHPDTIRSQNN
HCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCH
LAGLYQRMGRYAEAEPLYRNALATRERLRGAEHPDTLKVVNNLASLYAEQGQFAQAEPLY
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHH
LRALHGRKKLLGEEHPETLNSLNNLAQLYERYQRYAEAEPLYLRTVAARERLLGRDHPYT
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCH
LNSLNNLANLYARQQRYKEALPLYRQVLTVRERVLGPEHPSTLSSLNNLAFLYARQRRYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
KAEPLYRRAISGAEKVLGHDHPETRLFRENLEALREPRPGL
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SSLSTAELTRLERFLGAHDSRFALALVRMPQTPQREEFARRLQEFSGEQQRPFHRFDLA
CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCC
GLGTGEVWGKVEQGLPVGTIAILEGLDESFNHPDGQMASFLNRQRERIAELLPGPVLLVL
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
GDRAMDRFFTDAPDLADWYAASFEFSATASAAPAQDDGSIPENSSEWIESRMSLLRAQLQ
CCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ADVPDRIKARILRELALLYRDSVYGVPMDPDRVRTRSASESLGAAEVMAQEAVEIQRSLA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKDTSADQARELALALNVQGSLLQESGRYAEAEPLAKEALEIRKRVLGEEHPDTIRSQNN
HCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCH
LAGLYQRMGRYAEAEPLYRNALATRERLRGAEHPDTLKVVNNLASLYAEQGQFAQAEPLY
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHH
LRALHGRKKLLGEEHPETLNSLNNLAQLYERYQRYAEAEPLYLRTVAARERLLGRDHPYT
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCH
LNSLNNLANLYARQQRYKEALPLYRQVLTVRERVLGPEHPSTLSSLNNLAFLYARQRRYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
KAEPLYRRAISGAEKVLGHDHPETRLFRENLEALREPRPGL
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA