| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621695
Identifier: 116621695
GI number: 116621695
Start: 3258760
End: 3260055
Strand: Reverse
Name: 116621695
Synonym: Acid_2577
Alternate gene names: NA
Gene position: 3260055-3258760 (Counterclockwise)
Preceding gene: 116621696
Following gene: 116621694
Centisome position: 32.71
GC content: 56.87
Gene sequence:
>1296_bases TTGGATGCTTCCAGACCCGATGCGCGCGGCACTCGCCAACTGCAATCCCAGCCTCTGGAGCCCACGGACCCGCGATTTAT CGACTTAGATGATATCCGGGGACTTCCCCTTCGCAAGTATCTTTCCAAGCTCTTGTTAGCGGCGGACTCCGTCGAACGCT TCGAAAAGGTGGCCGTGGCAGGAAATCGCGGCGCCGGGAAAAGCACGGAGCTGAATCGCGCACAGGCGGAGCTCCAGGCA AACGGTTATGAAACGCTGTGGGCCTCGGTCAACGAGAACCTCGACCCCAAGGAAATCTCTTTTAGCGACGTCATCCGCCT GATCGTGCAACTGATCGACGACCGGTTCGGTGAAGAGACTCACCGGTATCCGCAAGTAAAACAGGCGTTCGATGTTGTGA ATCAGTGGTTTCAGGAGGTCACTAAGACTTTTACCGAACAGATCAACTCCGCGAAGGACCTGGGATTGCGGGCACGGCTG GGTGGAGTTGCGGGCGTCGAGGCCGGAGGCGAAGCAGGCGCCAAAGCGGGAGCAGTCGCCAAGGGCGGCTTGAAGATCAA GACGGAACTGGGCGAACTCAGCGCCGCCATTTCCGTGATTCGGAGAAGCGAAGGCAGTGAGCGCACCGAAATCCGGGAAA CCCTCGAACGTTTTAACAATCAGTTGGTCCTGAACCTGAACTCCCTGCTCCGCGCCGTGACCGCGGTGAGTTGCCCGGGA AAGACGTTGGTAATTATTCTCGACAACGTGGACAAATATGAGCCGAGCGTCGTAAATCAGGCCTTCCTGAGAAACGCGGA CCTGTTCCGCGAAGTGGAGAGCCACTTGGTATTCACCATTCAATCCTCCTTACTGCATAATCCGGTGGAGGATGCTGTGG ATCAGAGCTTTAGGACTTTTGTGCTTCCCATGCTGCCGATCTTCGTACGGAATACGAGGAAATTGGAGGCGAAGGTCGTG GAGCGAGTGGGGGAGGCCATTTACAAACGGGTACCCGCATGTCTCTTCGAGGATGTTGGGATCGTAGAGGGCGTGGTCAA AGCGTCCGGAGGCTGCTGGCGCGATCTATTGCGCCTATTGCAGGAAGCCCTGCTGAGGGCCGATGCTCAGATTGGTCCAG CGGAATTGAAAGCCGCGGTGCAACAGGTAGGCCAAATGTATCAGCGGCTCTTGCGAAGCAGCGGCGACCTCGAAGTCCTC GCACAAGCGCACCTGAAGCACACGGTTCTCTCCGACGAGAGAACGCAGTATCTCCTCCATCACCTCTGTTTGTTGTCTTA TAACGGCGAAGGCTGA
Upstream 100 bases:
>100_bases CCCGAAAAATTCGTCGAGTGGTTCCATGAGCACGCACACCACTTGAAGGCGAAGCCCTGATCCAGGGGAGGGCCAATTAA CTTATCGGGCTACAATAGCT
Downstream 100 bases:
>100_bases TACGATTTCCATCCCCTGCTGGATAACTACGCTCCCGTGAAAGAAGCAGTGGAGGCGGCGCGCAGGGTAAACGCTGCGTA ATAATGAGTTCCTTGTCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MDASRPDARGTRQLQSQPLEPTDPRFIDLDDIRGLPLRKYLSKLLLAADSVERFEKVAVAGNRGAGKSTELNRAQAELQA NGYETLWASVNENLDPKEISFSDVIRLIVQLIDDRFGEETHRYPQVKQAFDVVNQWFQEVTKTFTEQINSAKDLGLRARL GGVAGVEAGGEAGAKAGAVAKGGLKIKTELGELSAAISVIRRSEGSERTEIRETLERFNNQLVLNLNSLLRAVTAVSCPG KTLVIILDNVDKYEPSVVNQAFLRNADLFREVESHLVFTIQSSLLHNPVEDAVDQSFRTFVLPMLPIFVRNTRKLEAKVV ERVGEAIYKRVPACLFEDVGIVEGVVKASGGCWRDLLRLLQEALLRADAQIGPAELKAAVQQVGQMYQRLLRSSGDLEVL AQAHLKHTVLSDERTQYLLHHLCLLSYNGEG
Sequences:
>Translated_431_residues MDASRPDARGTRQLQSQPLEPTDPRFIDLDDIRGLPLRKYLSKLLLAADSVERFEKVAVAGNRGAGKSTELNRAQAELQA NGYETLWASVNENLDPKEISFSDVIRLIVQLIDDRFGEETHRYPQVKQAFDVVNQWFQEVTKTFTEQINSAKDLGLRARL GGVAGVEAGGEAGAKAGAVAKGGLKIKTELGELSAAISVIRRSEGSERTEIRETLERFNNQLVLNLNSLLRAVTAVSCPG KTLVIILDNVDKYEPSVVNQAFLRNADLFREVESHLVFTIQSSLLHNPVEDAVDQSFRTFVLPMLPIFVRNTRKLEAKVV ERVGEAIYKRVPACLFEDVGIVEGVVKASGGCWRDLLRLLQEALLRADAQIGPAELKAAVQQVGQMYQRLLRSSGDLEVL AQAHLKHTVLSDERTQYLLHHLCLLSYNGEG >Mature_431_residues MDASRPDARGTRQLQSQPLEPTDPRFIDLDDIRGLPLRKYLSKLLLAADSVERFEKVAVAGNRGAGKSTELNRAQAELQA NGYETLWASVNENLDPKEISFSDVIRLIVQLIDDRFGEETHRYPQVKQAFDVVNQWFQEVTKTFTEQINSAKDLGLRARL GGVAGVEAGGEAGAKAGAVAKGGLKIKTELGELSAAISVIRRSEGSERTEIRETLERFNNQLVLNLNSLLRAVTAVSCPG KTLVIILDNVDKYEPSVVNQAFLRNADLFREVESHLVFTIQSSLLHNPVEDAVDQSFRTFVLPMLPIFVRNTRKLEAKVV ERVGEAIYKRVPACLFEDVGIVEGVVKASGGCWRDLLRLLQEALLRADAQIGPAELKAAVQQVGQMYQRLLRSSGDLEVL AQAHLKHTVLSDERTQYLLHHLCLLSYNGEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47778; Mature: 47778
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDASRPDARGTRQLQSQPLEPTDPRFIDLDDIRGLPLRKYLSKLLLAADSVERFEKVAVA CCCCCCCCCCHHHHHCCCCCCCCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GNRGAGKSTELNRAQAELQANGYETLWASVNENLDPKEISFSDVIRLIVQLIDDRFGEET CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCHHH HRYPQVKQAFDVVNQWFQEVTKTFTEQINSAKDLGLRARLGGVAGVEAGGEAGAKAGAVA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCC KGGLKIKTELGELSAAISVIRRSEGSERTEIRETLERFNNQLVLNLNSLLRAVTAVSCPG CCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHCCCC KTLVIILDNVDKYEPSVVNQAFLRNADLFREVESHLVFTIQSSLLHNPVEDAVDQSFRTF CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VLPMLPIFVRNTRKLEAKVVERVGEAIYKRVPACLFEDVGIVEGVVKASGGCWRDLLRLL HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH QEALLRADAQIGPAELKAAVQQVGQMYQRLLRSSGDLEVLAQAHLKHTVLSDERTQYLLH HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHH HLCLLSYNGEG HHHHHHCCCCC >Mature Secondary Structure MDASRPDARGTRQLQSQPLEPTDPRFIDLDDIRGLPLRKYLSKLLLAADSVERFEKVAVA CCCCCCCCCCHHHHHCCCCCCCCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GNRGAGKSTELNRAQAELQANGYETLWASVNENLDPKEISFSDVIRLIVQLIDDRFGEET CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCHHH HRYPQVKQAFDVVNQWFQEVTKTFTEQINSAKDLGLRARLGGVAGVEAGGEAGAKAGAVA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCC KGGLKIKTELGELSAAISVIRRSEGSERTEIRETLERFNNQLVLNLNSLLRAVTAVSCPG CCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHCCCC KTLVIILDNVDKYEPSVVNQAFLRNADLFREVESHLVFTIQSSLLHNPVEDAVDQSFRTF CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VLPMLPIFVRNTRKLEAKVVERVGEAIYKRVPACLFEDVGIVEGVVKASGGCWRDLLRLL HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH QEALLRADAQIGPAELKAAVQQVGQMYQRLLRSSGDLEVLAQAHLKHTVLSDERTQYLLH HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHH HLCLLSYNGEG HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA