| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is macB [H]
Identifier: 116621663
GI number: 116621663
Start: 3222371
End: 3224815
Strand: Reverse
Name: macB [H]
Synonym: Acid_2545
Alternate gene names: 116621663
Gene position: 3224815-3222371 (Counterclockwise)
Preceding gene: 116621667
Following gene: 116621660
Centisome position: 32.36
GC content: 66.46
Gene sequence:
>2445_bases ATGCTTTTCGTTGGCATGCCGTGTGCCAGATCATCCGCCATGGAATTCAAGTCCGCGCTGCGCTCACTCCGTTCCAATCC CGGGTTTTCAATTCTCGCCATCGCCATCCTCGCCCTCGGCATCGGAGCCAACACGGCGCTCTTCAGTGTCGTGAACACGG TGCTTCTGCGCCCGCTCGACTACCGCGAACCCGATCGCCTCGTCCTCGTCGGCAACAATGTCCGCGATCGCAAGATCGGA CTCTCGCAGCTCTCCGAACCGGATTTCGACGACCTCCACGATCAATCCACCGCCTTCGATGGCCTGGCCTGCTTCCTCGG CGGCGCGGGCAATTCCGTCCTCGTAGGCAAGTCCGCGGACTTCGCCTCCGTGGAGCGCGTCTCCCCGGAGTTCTTCCATG TCATGCGCATTGACGCAGTTCTCGGCCGCCTCTTCTCGCCCGACGAGCAGCGCGCCGGGGGACCCCTGGCGACCGTCATC ACCGACGCCTTCTGGAAGCGCCGCTTCGGCGGCAGCCCGAGCGCGATCGGCGCCACGCTGCGCGCGTACGACAAAGTCTT CACCGTGGTCGGCGTGCTGCCGCCCGGCTTCGCCTTCCCCGCCGAAACCGATCTCTACGTGGCGCGCGCCATCTACAGTC GCAACGAACACCGCTCCGCCCATAACTTCGAGGCCATCGGCCGCCTCAAGAACGGCGTCTCGGTGGAGCAGGCGCAGGCC CAGCTCACGGCCATCGGCGAACGCCTGGCGCAGGCGTACCCGTTAAGCAACAAGAACCAGAATTTCCGCGTCGCGTCGGT TCAGGAACAGATGGTCGGCTCGGTTAAGAACACGTTGTACCTGCTGCTCGGCTCGGTCGCGCTCGTGCTGCTGATCGCGT GCGCCAACGTCGCCAACCTGCTGCTCGCGCGCGCCACTTCGCGGACCCGCGAGATCGCTCTCCGCGCCGCGCTCGGCGCC GGCCGCTGGCAGATCGTGCGGCAGTTGCTGATCGAAAGCGCGATCATCGCCGTGCTCGCCGGAGCCGCCGGACTGGCGCT CGCATCCTGGGGCATCGAGGGCTTGATCACGCTCTCGCCCCAGAATCTGCCGCGCCTCGCCGAAATCCGCGTCGATGGCG TCGTCCTCCTGTTCACCCTCGGACTTTCCATCGCCGCCAGTTTCCTGTTCGGGCTCGTCCCCGCGCTGCAGGCCTCGCGC GTCGATCTCAGTCATGTGCTGCAGCAGGGCGGTGGACGCGGCGGCGTGGGCGCCGGCAGCGGACGTCTGCGCAACGTGCT GGTGGTCGCCGAGATCGCAATCTCCATCGTGCTGCTGGTCGGCGCCGGCCTGTTGATTCGCACGTTCTCCGCACTCACCA GCGTGCCGCTCGGCTTCAACCCGGAACACCTGCTCGTGGTGCAGGCCAATCTCGCCGCGTCCACCCTGGAACAATCGCAG CATGTCCTCACCGTGTATGACGAAGCCTTCCGCCAGATCGCCGCCATTCCCGGCGTGATCGATATCGCCGGGAACACCGG CATCCCCGGCGGTCCGCCGCGCTCCAACGGGGGCTACGTGCTGGAAGGCGGCCCGGGCTTCGACAAACTCGGCATGTCTG CTCCACAGGCCGATTTCCTGGTGACTACTCCCGGCTACTTCCGCGCCCTCCAGATTCCCCTTCGCGCCGGCCGCGATTTC TCCGCTCGCGATACCTACGATGGCGAGTTCGTCGCCATTATCAATGAAACCCTGGCCCGCCGCTCCTTCCCTGGCCAGGA CCCGCTCGGCCGGCGCCTGCGCTGCGGCCTGGATACCCCGAACTTCATGACGATCGTCGGCGTGGTCGCCGATACGCGCG CAGCCGACCCTTCGCAGCCGCCGCATGCCGCCCTCTACATGCCACACTGGCAGCATCCCAACTATGGACGCGCCATGAGC TTCGTGGTGCGCACGCAGGGGGAGCCGATGGCCGCGGCCGAAGCCGTGCGCCGCAAGATTCGCGAGGTCAATAGCGAAAT CCCCGTCAAATTCAGCACCATGGACCGGCGCCTGGCGCAGACCGTCGCTTCGCCCCGCTTCCGCGGAATCCTGCTCGGCA TCTTCGCCGGACTTGCCGTACTGCTCGCCATGGCCGGCGTCTACGGCATCATGGCCTACATGGTTGGACAGCGCACGGCG GAAATCGGCGTACGCATGGCGCTCGGCGCGGGGCGAATCACGATCCTGCGCATGGTGCTCAAAACCGGCGCCGCGCTCGC CGCGTGGGGTCTGCTCTTCGGCTTCGCCGGAGCGCTCGCCGCCAATCGCCTGGTGGAATCCATGCTGTTCGGCGTCAAGG CCACCGATCCCTCCACATTCGTGATCATGGCTGCATCGGTCGGCTTAATCGCGATCCTGGCCTGCGCCATCCCCGCCTGG CGCGCCACCCGCATCGACCCGCTCCAAGCCCTACGGCAGAACTAA
Upstream 100 bases:
>100_bases GTAGACGACGCTTTCGCCGCCGCGGTTAACAAGGCTGCCATCTTTTATTCGGCACGTCCCAGAACCGCACACCGTCCGCC TGCGTCTCCCTATCGAATCA
Downstream 100 bases:
>100_bases CATTCTCACTTTTTCAAAAACTCAATCAGTATTGGATTCACAATCTCCGGCCGCTCCAAAGCCGGACGATGGCCCGCGTC TTTGATCACGTGGAATTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 814; Mature: 814
Protein sequence:
>814_residues MLFVGMPCARSSAMEFKSALRSLRSNPGFSILAIAILALGIGANTALFSVVNTVLLRPLDYREPDRLVLVGNNVRDRKIG LSQLSEPDFDDLHDQSTAFDGLACFLGGAGNSVLVGKSADFASVERVSPEFFHVMRIDAVLGRLFSPDEQRAGGPLATVI TDAFWKRRFGGSPSAIGATLRAYDKVFTVVGVLPPGFAFPAETDLYVARAIYSRNEHRSAHNFEAIGRLKNGVSVEQAQA QLTAIGERLAQAYPLSNKNQNFRVASVQEQMVGSVKNTLYLLLGSVALVLLIACANVANLLLARATSRTREIALRAALGA GRWQIVRQLLIESAIIAVLAGAAGLALASWGIEGLITLSPQNLPRLAEIRVDGVVLLFTLGLSIAASFLFGLVPALQASR VDLSHVLQQGGGRGGVGAGSGRLRNVLVVAEIAISIVLLVGAGLLIRTFSALTSVPLGFNPEHLLVVQANLAASTLEQSQ HVLTVYDEAFRQIAAIPGVIDIAGNTGIPGGPPRSNGGYVLEGGPGFDKLGMSAPQADFLVTTPGYFRALQIPLRAGRDF SARDTYDGEFVAIINETLARRSFPGQDPLGRRLRCGLDTPNFMTIVGVVADTRAADPSQPPHAALYMPHWQHPNYGRAMS FVVRTQGEPMAAAEAVRRKIREVNSEIPVKFSTMDRRLAQTVASPRFRGILLGIFAGLAVLLAMAGVYGIMAYMVGQRTA EIGVRMALGAGRITILRMVLKTGAALAAWGLLFGFAGALAANRLVESMLFGVKATDPSTFVIMAASVGLIAILACAIPAW RATRIDPLQALRQN
Sequences:
>Translated_814_residues MLFVGMPCARSSAMEFKSALRSLRSNPGFSILAIAILALGIGANTALFSVVNTVLLRPLDYREPDRLVLVGNNVRDRKIG LSQLSEPDFDDLHDQSTAFDGLACFLGGAGNSVLVGKSADFASVERVSPEFFHVMRIDAVLGRLFSPDEQRAGGPLATVI TDAFWKRRFGGSPSAIGATLRAYDKVFTVVGVLPPGFAFPAETDLYVARAIYSRNEHRSAHNFEAIGRLKNGVSVEQAQA QLTAIGERLAQAYPLSNKNQNFRVASVQEQMVGSVKNTLYLLLGSVALVLLIACANVANLLLARATSRTREIALRAALGA GRWQIVRQLLIESAIIAVLAGAAGLALASWGIEGLITLSPQNLPRLAEIRVDGVVLLFTLGLSIAASFLFGLVPALQASR VDLSHVLQQGGGRGGVGAGSGRLRNVLVVAEIAISIVLLVGAGLLIRTFSALTSVPLGFNPEHLLVVQANLAASTLEQSQ HVLTVYDEAFRQIAAIPGVIDIAGNTGIPGGPPRSNGGYVLEGGPGFDKLGMSAPQADFLVTTPGYFRALQIPLRAGRDF SARDTYDGEFVAIINETLARRSFPGQDPLGRRLRCGLDTPNFMTIVGVVADTRAADPSQPPHAALYMPHWQHPNYGRAMS FVVRTQGEPMAAAEAVRRKIREVNSEIPVKFSTMDRRLAQTVASPRFRGILLGIFAGLAVLLAMAGVYGIMAYMVGQRTA EIGVRMALGAGRITILRMVLKTGAALAAWGLLFGFAGALAANRLVESMLFGVKATDPSTFVIMAASVGLIAILACAIPAW RATRIDPLQALRQN >Mature_814_residues MLFVGMPCARSSAMEFKSALRSLRSNPGFSILAIAILALGIGANTALFSVVNTVLLRPLDYREPDRLVLVGNNVRDRKIG LSQLSEPDFDDLHDQSTAFDGLACFLGGAGNSVLVGKSADFASVERVSPEFFHVMRIDAVLGRLFSPDEQRAGGPLATVI TDAFWKRRFGGSPSAIGATLRAYDKVFTVVGVLPPGFAFPAETDLYVARAIYSRNEHRSAHNFEAIGRLKNGVSVEQAQA QLTAIGERLAQAYPLSNKNQNFRVASVQEQMVGSVKNTLYLLLGSVALVLLIACANVANLLLARATSRTREIALRAALGA GRWQIVRQLLIESAIIAVLAGAAGLALASWGIEGLITLSPQNLPRLAEIRVDGVVLLFTLGLSIAASFLFGLVPALQASR VDLSHVLQQGGGRGGVGAGSGRLRNVLVVAEIAISIVLLVGAGLLIRTFSALTSVPLGFNPEHLLVVQANLAASTLEQSQ HVLTVYDEAFRQIAAIPGVIDIAGNTGIPGGPPRSNGGYVLEGGPGFDKLGMSAPQADFLVTTPGYFRALQIPLRAGRDF SARDTYDGEFVAIINETLARRSFPGQDPLGRRLRCGLDTPNFMTIVGVVADTRAADPSQPPHAALYMPHWQHPNYGRAMS FVVRTQGEPMAAAEAVRRKIREVNSEIPVKFSTMDRRLAQTVASPRFRGILLGIFAGLAVLLAMAGVYGIMAYMVGQRTA EIGVRMALGAGRITILRMVLKTGAALAAWGLLFGFAGALAANRLVESMLFGVKATDPSTFVIMAASVGLIAILACAIPAW RATRIDPLQALRQN
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=289, Percent_Identity=26.2975778546713, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 86615; Mature: 86615
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFVGMPCARSSAMEFKSALRSLRSNPGFSILAIAILALGIGANTALFSVVNTVLLRPLD CEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC YREPDRLVLVGNNVRDRKIGLSQLSEPDFDDLHDQSTAFDGLACFLGGAGNSVLVGKSAD CCCCCCEEEECCCCCCHHCCHHHCCCCCCHHHCCCHHHHHHHHHHCCCCCCEEEEECCCC FASVERVSPEFFHVMRIDAVLGRLFSPDEQRAGGPLATVITDAFWKRRFGGSPSAIGATL CHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHH RAYDKVFTVVGVLPPGFAFPAETDLYVARAIYSRNEHRSAHNFEAIGRLKNGVSVEQAQA HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHH QLTAIGERLAQAYPLSNKNQNFRVASVQEQMVGSVKNTLYLLLGSVALVLLIACANVANL HHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLARATSRTREIALRAALGAGRWQIVRQLLIESAIIAVLAGAAGLALASWGIEGLITLSP HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC QNLPRLAEIRVDGVVLLFTLGLSIAASFLFGLVPALQASRVDLSHVLQQGGGRGGVGAGS CCCCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCC GRLRNVLVVAEIAISIVLLVGAGLLIRTFSALTSVPLGFNPEHLLVVQANLAASTLEQSQ CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHCC HVLTVYDEAFRQIAAIPGVIDIAGNTGIPGGPPRSNGGYVLEGGPGFDKLGMSAPQADFL CEEHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCCCEE VTTPGYFRALQIPLRAGRDFSARDTYDGEFVAIINETLARRSFPGQDPLGRRLRCGLDTP EECCCHHEEEEEHHHCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCHHCCCCCCC NFMTIVGVVADTRAADPSQPPHAALYMPHWQHPNYGRAMSFVVRTQGEPMAAAEAVRRKI CHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHEEEEECCCCCHHHHHHHHHHH REVNSEIPVKFSTMDRRLAQTVASPRFRGILLGIFAGLAVLLAMAGVYGIMAYMVGQRTA HHHCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH EIGVRMALGAGRITILRMVLKTGAALAAWGLLFGFAGALAANRLVESMLFGVKATDPSTF HHCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE VIMAASVGLIAILACAIPAWRATRIDPLQALRQN EEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCC >Mature Secondary Structure MLFVGMPCARSSAMEFKSALRSLRSNPGFSILAIAILALGIGANTALFSVVNTVLLRPLD CEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC YREPDRLVLVGNNVRDRKIGLSQLSEPDFDDLHDQSTAFDGLACFLGGAGNSVLVGKSAD CCCCCCEEEECCCCCCHHCCHHHCCCCCCHHHCCCHHHHHHHHHHCCCCCCEEEEECCCC FASVERVSPEFFHVMRIDAVLGRLFSPDEQRAGGPLATVITDAFWKRRFGGSPSAIGATL CHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHH RAYDKVFTVVGVLPPGFAFPAETDLYVARAIYSRNEHRSAHNFEAIGRLKNGVSVEQAQA HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHH QLTAIGERLAQAYPLSNKNQNFRVASVQEQMVGSVKNTLYLLLGSVALVLLIACANVANL HHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLARATSRTREIALRAALGAGRWQIVRQLLIESAIIAVLAGAAGLALASWGIEGLITLSP HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC QNLPRLAEIRVDGVVLLFTLGLSIAASFLFGLVPALQASRVDLSHVLQQGGGRGGVGAGS CCCCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCC GRLRNVLVVAEIAISIVLLVGAGLLIRTFSALTSVPLGFNPEHLLVVQANLAASTLEQSQ CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHCC HVLTVYDEAFRQIAAIPGVIDIAGNTGIPGGPPRSNGGYVLEGGPGFDKLGMSAPQADFL CEEHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCCCEE VTTPGYFRALQIPLRAGRDFSARDTYDGEFVAIINETLARRSFPGQDPLGRRLRCGLDTP EECCCHHEEEEEHHHCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCHHCCCCCCC NFMTIVGVVADTRAADPSQPPHAALYMPHWQHPNYGRAMSFVVRTQGEPMAAAEAVRRKI CHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHEEEEECCCCCHHHHHHHHHHH REVNSEIPVKFSTMDRRLAQTVASPRFRGILLGIFAGLAVLLAMAGVYGIMAYMVGQRTA HHHCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH EIGVRMALGAGRITILRMVLKTGAALAAWGLLFGFAGALAANRLVESMLFGVKATDPSTF HHCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE VIMAASVGLIAILACAIPAWRATRIDPLQALRQN EEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA