| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621658
Identifier: 116621658
GI number: 116621658
Start: 3216838
End: 3217941
Strand: Reverse
Name: 116621658
Synonym: Acid_2540
Alternate gene names: NA
Gene position: 3217941-3216838 (Counterclockwise)
Preceding gene: 116621659
Following gene: 116621654
Centisome position: 32.29
GC content: 64.04
Gene sequence:
>1104_bases ATGGCCGCATCCGCGCTGCCCGCGCAGATCATCGTCGATCCCGTCAAACTGCGTATCATCCTGCCCGAATTCGAAAAGGA CGAGGTCTCCCTTCACTGCGAAGTCCAGCCGCTCAGGCCCGCCCTGAACTACGGCTTTCGCTTCCACGCCGGATATATGG TCACCATGCCGATGAACCAGTTCTTCGGCCCCAATCACGGCTGGAGCATGCTGACCCGGATCACGCCCCTCGAAGGCGAC CGTAAGCCCGTCTACCTCGTCTCCAGCATGGCCCTCCCGCCGGTCCCCAAAACCAAGAACGAGCTCCGCATCGGCGGCGG ATACCTGCTCGGGGAAGGCGCTTACGACGTGCGCTTCATGCTGCTCGACGATAGCGGCCGCACCTGCCGCAAGAGCTGGC ACGTTGACGTGCATCGCAGCCGCGCCGAGCAGAAGGTGCAGGTCAACATGCCGCCGGAGACCGTGTGGGAGCTCGGCCTT CGCGGAGCCCGCCGCCTTCCCGCCGCCACGGACGACACCGCCCCCGTGCGCCTCACCATCTTCCTCCACACCGCTCCGCT CTTCCCGCGCCGCACCCGCATGCGCCCCAACGACATGATGACCCTCATGAGCACCGTCTCTTCCCTGCTGGAGCGCGTGC CCGTACGCAATGTGCGCCTGGTGCTGTTCAACCTGGACCAGCAAAAGGAGCTCTACCGGAAGGAGGATTTCCTGCTGCAA GACATGGCGCAGGTCTCGCAGGCGATGGCCAAGATCGAACTCGAATCGGTCGATTTCCAGACTCTCCAAAACCGCCGCGG CCACGTGGACCTGATCGCCGACCTCGTAAACGGGGAAATCGGCGCGCAGCCTCCCAGCGATGTCGTGCTCTTCCTCGGAC CCGGCGCGCGCCACTTCGACCGCGTGCCGCCAAGCATCCTCGAAAAACCCGCGGGCCACGGTCCCCAGTTCTACTATTTC CAGATCGCGCCAATCGTACGCCAGACCGCCCAACCCGCCGACACCATAAAGAGCGCCATCGCCCGCCTCGGCGGCAAAAC CATCATGATCCACAACCCCGGCGAATTCGCCAAAGCCATCGACCGCCTCGAAAAATCCCGGTAA
Upstream 100 bases:
>100_bases CTGCTCGCCGCAATGATGTGAATTTCCCGCGCACCTGTGGCGCGTAGCGGGCCAACGTGCTAAGACTGGAAATGTGCGCG CCGCCCTACTCCTCGCCCTG
Downstream 100 bases:
>100_bases GGCAGGCCTAAAAAAAGCCGCGCCCCCGAAGGGTCGCGGCTCGCTTTCATCAACTGATGAATCGCCTACTTCGCCTGCCC CGGAGCATGGGGACGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MAASALPAQIIVDPVKLRIILPEFEKDEVSLHCEVQPLRPALNYGFRFHAGYMVTMPMNQFFGPNHGWSMLTRITPLEGD RKPVYLVSSMALPPVPKTKNELRIGGGYLLGEGAYDVRFMLLDDSGRTCRKSWHVDVHRSRAEQKVQVNMPPETVWELGL RGARRLPAATDDTAPVRLTIFLHTAPLFPRRTRMRPNDMMTLMSTVSSLLERVPVRNVRLVLFNLDQQKELYRKEDFLLQ DMAQVSQAMAKIELESVDFQTLQNRRGHVDLIADLVNGEIGAQPPSDVVLFLGPGARHFDRVPPSILEKPAGHGPQFYYF QIAPIVRQTAQPADTIKSAIARLGGKTIMIHNPGEFAKAIDRLEKSR
Sequences:
>Translated_367_residues MAASALPAQIIVDPVKLRIILPEFEKDEVSLHCEVQPLRPALNYGFRFHAGYMVTMPMNQFFGPNHGWSMLTRITPLEGD RKPVYLVSSMALPPVPKTKNELRIGGGYLLGEGAYDVRFMLLDDSGRTCRKSWHVDVHRSRAEQKVQVNMPPETVWELGL RGARRLPAATDDTAPVRLTIFLHTAPLFPRRTRMRPNDMMTLMSTVSSLLERVPVRNVRLVLFNLDQQKELYRKEDFLLQ DMAQVSQAMAKIELESVDFQTLQNRRGHVDLIADLVNGEIGAQPPSDVVLFLGPGARHFDRVPPSILEKPAGHGPQFYYF QIAPIVRQTAQPADTIKSAIARLGGKTIMIHNPGEFAKAIDRLEKSR >Mature_366_residues AASALPAQIIVDPVKLRIILPEFEKDEVSLHCEVQPLRPALNYGFRFHAGYMVTMPMNQFFGPNHGWSMLTRITPLEGDR KPVYLVSSMALPPVPKTKNELRIGGGYLLGEGAYDVRFMLLDDSGRTCRKSWHVDVHRSRAEQKVQVNMPPETVWELGLR GARRLPAATDDTAPVRLTIFLHTAPLFPRRTRMRPNDMMTLMSTVSSLLERVPVRNVRLVLFNLDQQKELYRKEDFLLQD MAQVSQAMAKIELESVDFQTLQNRRGHVDLIADLVNGEIGAQPPSDVVLFLGPGARHFDRVPPSILEKPAGHGPQFYYFQ IAPIVRQTAQPADTIKSAIARLGGKTIMIHNPGEFAKAIDRLEKSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41377; Mature: 41245
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASALPAQIIVDPVKLRIILPEFEKDEVSLHCEVQPLRPALNYGFRFHAGYMVTMPMNQ CCCCCCCHHEEECEEEEEEECCCCCCCCEEEEEEEEECCHHHHCCEEEECCEEEEECHHH FFGPNHGWSMLTRITPLEGDRKPVYLVSSMALPPVPKTKNELRIGGGYLLGEGAYDVRFM HCCCCCCHHHHHEECCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCEEEECCCCEEEEE LLDDSGRTCRKSWHVDVHRSRAEQKVQVNMPPETVWELGLRGARRLPAATDDTAPVRLTI EECCCCCHHHHHCCEEHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEE FLHTAPLFPRRTRMRPNDMMTLMSTVSSLLERVPVRNVRLVLFNLDQQKELYRKEDFLLQ EEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHH DMAQVSQAMAKIELESVDFQTLQNRRGHVDLIADLVNGEIGAQPPSDVVLFLGPGARHFD HHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHH RVPPSILEKPAGHGPQFYYFQIAPIVRQTAQPADTIKSAIARLGGKTIMIHNPGEFAKAI CCCHHHHHCCCCCCCEEEEEEEEHHHHHCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHH DRLEKSR HHHHHCC >Mature Secondary Structure AASALPAQIIVDPVKLRIILPEFEKDEVSLHCEVQPLRPALNYGFRFHAGYMVTMPMNQ CCCCCCHHEEECEEEEEEECCCCCCCCEEEEEEEEECCHHHHCCEEEECCEEEEECHHH FFGPNHGWSMLTRITPLEGDRKPVYLVSSMALPPVPKTKNELRIGGGYLLGEGAYDVRFM HCCCCCCHHHHHEECCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCEEEECCCCEEEEE LLDDSGRTCRKSWHVDVHRSRAEQKVQVNMPPETVWELGLRGARRLPAATDDTAPVRLTI EECCCCCHHHHHCCEEHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEE FLHTAPLFPRRTRMRPNDMMTLMSTVSSLLERVPVRNVRLVLFNLDQQKELYRKEDFLLQ EEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHH DMAQVSQAMAKIELESVDFQTLQNRRGHVDLIADLVNGEIGAQPPSDVVLFLGPGARHFD HHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHH RVPPSILEKPAGHGPQFYYFQIAPIVRQTAQPADTIKSAIARLGGKTIMIHNPGEFAKAI CCCHHHHHCCCCCCCEEEEEEEEHHHHHCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHH DRLEKSR HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA