| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621634
Identifier: 116621634
GI number: 116621634
Start: 3189532
End: 3191013
Strand: Reverse
Name: 116621634
Synonym: Acid_2516
Alternate gene names: NA
Gene position: 3191013-3189532 (Counterclockwise)
Preceding gene: 116621642
Following gene: 116621630
Centisome position: 32.02
GC content: 63.43
Gene sequence:
>1482_bases ATGGCCGAGATCAAAGCCGATACCTTCATTCGCGACTACGGACAGTGCCTCGTCGAACGCCGCGCCGCCCTCTTCGCCGG CGCCGGACTCTCGCGCGCGGCGGGCTTCGTCGATTGGAAAGGGCTGATGAGCGGCATCGCCAGCGACCTCGACCTCCGGA TCGATCGCGAAAACGATCTCGTCGCCCTGGCCCAGTACTACACCAACGAACGCCACGGCAATCGCGCCGAGATCAACAAC CTGCTGATCCAGCAGTTCACCCAGGAAGCCGAGGAGACCCGCAATCACCAACTCATCGCCCGCCTCCCGATCCACACCGT CTGGACCACCAACTACGACGAGCTCCTCGAAAAATCCTTTCGCCGCCAGGACAAGCGCGTCGATGTCAAGGTGGATCCCC GCACGCTCGCCCTCCATCAGCCCGGCACCGATGTCACCATCTTCAAAATGCACGGCGACGTCTCCGCACCCTACAACGCC GTGCTCACCAAAGAGGACTACGAGACCTATTCCGAAACCCGCGAGCTCTTCACCATCCGCCTCAAAGGCGATCTGGTAAC CCAGACCTTCCTCTTCCTCGGCTTCAGCTTCACCGATCCCAATATCGAGTACATTCTCAGCCGCATACGCGGCCTGCTGG GCCAGGACACCCCCACCCACTACTGCATCATGCGGCGTCCCGAAAAGCCCGCGGATTCCGCCGGCGCCGCCAAGGCCGAT TACGAGTACGATTGCCGCAAGCTCAACCTGCGCGTCGGCGACCTCCAGCGCTACGGCATTCAGACCGTCCTGATCGATGA GTACAGCGAAGTCACCGACATCCTGCAGGAGCTCAACCGCCGCGCCTTCCTCAAGAACATCTTCGTCTCCGGCAGCTGGA CCGCCGGCCTGGATACCTTCGACGTCCCGCGCCTCGGCGCCTTCTCCCGGCTGCTCGGCAAGGAAATCATCCGCCGCGGC TACAACCTGGTCTCCGGTTACGGCTGGGGTATTGGCAGCGAGCTCATCGTCGGCGCACTCGACGCCGCCGACGAGAAGTT CTCGACGCTGCACGACCGCCTGGTCCTGCGCCCCTTCCCGCGCAGCCTCGAGGACGCGCGGCGGGACAAGATCTTTCGCG AGTGGCGCGAAGCCATGCTCTCTCTCGCCGGCATCAGCATCTTCGTGGCCGGCAACAAGCCCGACCCCGCGAGCGGGCAA ATCGTCAATGGCGATGGCGTCCTGCAGGAATTCGAGATCGGCACTACCGCGCCGCTCGCGAACTTCCCCATCCCCATCGG AGCGACTGGGTACACAGCCCGCGAAATATGGGAGACCGTCATGCGGAATCCCGACCGCTACTACGGACGCCTCGACGTGA AAACGCCCCTGCAGGCGCTCGGCGATCCGAACATCACCAATGAGAAGGCCATCGATGCCATCTTCGAGATCGTCAGCCGC TGCGTCAAGGCCGAGGGTTTCGCCGCCAGGCTGGGCGGTTAG
Upstream 100 bases:
>100_bases CGTGGTATCGACGAAGAACGCGCCGTCCACATTCTCCGGAACCCTCTGCGCCCGGTCCGCCATGTTCCCAGGATGCCATA AGGAGGTACTACAATCCGGT
Downstream 100 bases:
>100_bases TTGAGTTAGCAAGGACGCTCCCTGACGGTCGCGGCTCTGATGGGGTGAGCGAATCGCGCAGGCGATCGGAGATCTCTATG CCTTCGCCGCCTTCAGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MAEIKADTFIRDYGQCLVERRAALFAGAGLSRAAGFVDWKGLMSGIASDLDLRIDRENDLVALAQYYTNERHGNRAEINN LLIQQFTQEAEETRNHQLIARLPIHTVWTTNYDELLEKSFRRQDKRVDVKVDPRTLALHQPGTDVTIFKMHGDVSAPYNA VLTKEDYETYSETRELFTIRLKGDLVTQTFLFLGFSFTDPNIEYILSRIRGLLGQDTPTHYCIMRRPEKPADSAGAAKAD YEYDCRKLNLRVGDLQRYGIQTVLIDEYSEVTDILQELNRRAFLKNIFVSGSWTAGLDTFDVPRLGAFSRLLGKEIIRRG YNLVSGYGWGIGSELIVGALDAADEKFSTLHDRLVLRPFPRSLEDARRDKIFREWREAMLSLAGISIFVAGNKPDPASGQ IVNGDGVLQEFEIGTTAPLANFPIPIGATGYTAREIWETVMRNPDRYYGRLDVKTPLQALGDPNITNEKAIDAIFEIVSR CVKAEGFAARLGG
Sequences:
>Translated_493_residues MAEIKADTFIRDYGQCLVERRAALFAGAGLSRAAGFVDWKGLMSGIASDLDLRIDRENDLVALAQYYTNERHGNRAEINN LLIQQFTQEAEETRNHQLIARLPIHTVWTTNYDELLEKSFRRQDKRVDVKVDPRTLALHQPGTDVTIFKMHGDVSAPYNA VLTKEDYETYSETRELFTIRLKGDLVTQTFLFLGFSFTDPNIEYILSRIRGLLGQDTPTHYCIMRRPEKPADSAGAAKAD YEYDCRKLNLRVGDLQRYGIQTVLIDEYSEVTDILQELNRRAFLKNIFVSGSWTAGLDTFDVPRLGAFSRLLGKEIIRRG YNLVSGYGWGIGSELIVGALDAADEKFSTLHDRLVLRPFPRSLEDARRDKIFREWREAMLSLAGISIFVAGNKPDPASGQ IVNGDGVLQEFEIGTTAPLANFPIPIGATGYTAREIWETVMRNPDRYYGRLDVKTPLQALGDPNITNEKAIDAIFEIVSR CVKAEGFAARLGG >Mature_492_residues AEIKADTFIRDYGQCLVERRAALFAGAGLSRAAGFVDWKGLMSGIASDLDLRIDRENDLVALAQYYTNERHGNRAEINNL LIQQFTQEAEETRNHQLIARLPIHTVWTTNYDELLEKSFRRQDKRVDVKVDPRTLALHQPGTDVTIFKMHGDVSAPYNAV LTKEDYETYSETRELFTIRLKGDLVTQTFLFLGFSFTDPNIEYILSRIRGLLGQDTPTHYCIMRRPEKPADSAGAAKADY EYDCRKLNLRVGDLQRYGIQTVLIDEYSEVTDILQELNRRAFLKNIFVSGSWTAGLDTFDVPRLGAFSRLLGKEIIRRGY NLVSGYGWGIGSELIVGALDAADEKFSTLHDRLVLRPFPRSLEDARRDKIFREWREAMLSLAGISIFVAGNKPDPASGQI VNGDGVLQEFEIGTTAPLANFPIPIGATGYTAREIWETVMRNPDRYYGRLDVKTPLQALGDPNITNEKAIDAIFEIVSRC VKAEGFAARLGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55521; Mature: 55389
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIKADTFIRDYGQCLVERRAALFAGAGLSRAAGFVDWKGLMSGIASDLDLRIDRENDL CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCEEEEECCCCE VALAQYYTNERHGNRAEINNLLIQQFTQEAEETRNHQLIARLPIHTVWTTNYDELLEKSF EHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCHHHHHHHHH RRQDKRVDVKVDPRTLALHQPGTDVTIFKMHGDVSAPYNAVLTKEDYETYSETRELFTIR HHCCCCEEEEECCCEEEEECCCCCEEEEEECCCCCCCCCEEEECHHHHHHHHHHHEEEEE LKGDLVTQTFLFLGFSFTDPNIEYILSRIRGLLGQDTPTHYCIMRRPEKPADSAGAAKAD ECCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCC YEYDCRKLNLRVGDLQRYGIQTVLIDEYSEVTDILQELNRRAFLKNIFVSGSWTAGLDTF CCCCCEEEEEEEECHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DVPRLGAFSRLLGKEIIRRGYNLVSGYGWGIGSELIVGALDAADEKFSTLHDRLVLRPFP CCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCC RSLEDARRDKIFREWREAMLSLAGISIFVAGNKPDPASGQIVNGDGVLQEFEIGTTAPLA CHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEECCCCCEEEECCCCCCCCC NFPIPIGATGYTAREIWETVMRNPDRYYGRLDVKTPLQALGDPNITNEKAIDAIFEIVSR CCCCCCCCCCCCHHHHHHHHHCCCCHHEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHH CVKAEGFAARLGG HHCCCCCHHCCCC >Mature Secondary Structure AEIKADTFIRDYGQCLVERRAALFAGAGLSRAAGFVDWKGLMSGIASDLDLRIDRENDL CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCEEEEECCCCE VALAQYYTNERHGNRAEINNLLIQQFTQEAEETRNHQLIARLPIHTVWTTNYDELLEKSF EHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCHHHHHHHHH RRQDKRVDVKVDPRTLALHQPGTDVTIFKMHGDVSAPYNAVLTKEDYETYSETRELFTIR HHCCCCEEEEECCCEEEEECCCCCEEEEEECCCCCCCCCEEEECHHHHHHHHHHHEEEEE LKGDLVTQTFLFLGFSFTDPNIEYILSRIRGLLGQDTPTHYCIMRRPEKPADSAGAAKAD ECCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCC YEYDCRKLNLRVGDLQRYGIQTVLIDEYSEVTDILQELNRRAFLKNIFVSGSWTAGLDTF CCCCCEEEEEEEECHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DVPRLGAFSRLLGKEIIRRGYNLVSGYGWGIGSELIVGALDAADEKFSTLHDRLVLRPFP CCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCC RSLEDARRDKIFREWREAMLSLAGISIFVAGNKPDPASGQIVNGDGVLQEFEIGTTAPLA CHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEECCCCCEEEECCCCCCCCC NFPIPIGATGYTAREIWETVMRNPDRYYGRLDVKTPLQALGDPNITNEKAIDAIFEIVSR CCCCCCCCCCCCHHHHHHHHHCCCCHHEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHH CVKAEGFAARLGG HHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA