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The map label for this gene is yrbH [C]

Identifier: 116621618

GI number: 116621618

Start: 3174259

End: 3175278

Strand: Direct

Name: yrbH [C]

Synonym: Acid_2500

Alternate gene names: 116621618

Gene position: 3174259-3175278 (Clockwise)

Preceding gene: 116621612

Following gene: 116621619

Centisome position: 31.85

GC content: 65.1

Gene sequence:

>1020_bases
ATGCCGACCGCAAACCAACAGCCATGCGAACATGATAGTTCCATGCCCACAGAGAATGAATGGCTGGCCGCTGCGCGAGC
CGCAATGAGGATTGAAGCGGAATCGATTGCCCGCGCGGCGGAGCGGCTGGATGGAGAACTGGTGCGGGCGGTAGAGCTGA
TTCTGGCGCATCCCGGTAAGGTGGTGGTGACGGGGATCGGGAAATCCGGGCATATCGCGCGCAAGATTGTGGCGACCTTA
TGCAGCACCGGGACGGCGGCGGTGTTCCTGCATCCGGCAGAGGCGGCGCACGGAGATCTGGGAATCTACACGCCGGGAGA
TCCGACGATTGTGATTTCGAAGAATGGGGCGTCGAGCGAACTGCAATCGCTGGTGCCGATGCTGCGGCAGTTCCGGTCGC
CGCTGGTGGGAATCCTGGGGAATGCACATTCGCCGCTCGGAGCCGAGGTGGACGTCCTGCTGGATGCGAGTGTGGAGCGC
GAGGCCGACCCGCACAATCTGGCGCCGACGGCGAGCGCGGTGACGGCGCTGGCTTTGGGGCACGCGCTCGCGATCGCGCT
GATGTGCGCGCGGAATTTCACGCCGGAGGAGTTCGGGAAATTCCATCCCGGGGGACAGCTGGGAAGGAATCTCCGGTTGA
GCGTGAGGGAGGCGATGCACGGGGCGGACGAGGTGGCGTTCGTGGCTCCGGGGGCGGCGCTGAAGGACGTAATCATCGCG
ATGACGCGGAAGCCGATGGGCGGAGCCTGCGTGGTGGCGGAGGCTGGTGTGCTCGCGGGATTCATTACGGACGGCGATTT
GCGGAGAGCTCTGACGAACCACGATGACATTCGCGGGCTGACGGCTGCGGAGGCAATGACGGCGCGGCCGGTGACGATCG
GGCCGGAGGCGACGCTGGGGCAGGCGCTGGAGTTAATGGAGAGACGGCGGTCGCAGATCTCGGTGCTCCCGGTGGTGGAT
GGGGACGGGCGGGCGCTAGGTGTCGTGCGGATTCACGACATCTATCTGGGGGTCAAGTAA

Upstream 100 bases:

>100_bases
CCCTCCGCTGTGTTCTAAAATCGCCAGCATCCATCGTGACGCAACCCGAGGGTGGAAGGGAAAGCGAAATTATTTATGCA
GGCGATATGCATTATCGATC

Downstream 100 bases:

>100_bases
AGTCAAAGGCATGTCTCGCAAAGGCGCAAAGGACGCAAAGAAAACCTAAGAAAAAGCAGGTGGTGAGGAGCGGAATGAAG
GAACGAGTGTTGGCGGCGTA

Product: KpsF/GutQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MPTANQQPCEHDSSMPTENEWLAAARAAMRIEAESIARAAERLDGELVRAVELILAHPGKVVVTGIGKSGHIARKIVATL
CSTGTAAVFLHPAEAAHGDLGIYTPGDPTIVISKNGASSELQSLVPMLRQFRSPLVGILGNAHSPLGAEVDVLLDASVER
EADPHNLAPTASAVTALALGHALAIALMCARNFTPEEFGKFHPGGQLGRNLRLSVREAMHGADEVAFVAPGAALKDVIIA
MTRKPMGGACVVAEAGVLAGFITDGDLRRALTNHDDIRGLTAAEAMTARPVTIGPEATLGQALELMERRRSQISVLPVVD
GDGRALGVVRIHDIYLGVK

Sequences:

>Translated_339_residues
MPTANQQPCEHDSSMPTENEWLAAARAAMRIEAESIARAAERLDGELVRAVELILAHPGKVVVTGIGKSGHIARKIVATL
CSTGTAAVFLHPAEAAHGDLGIYTPGDPTIVISKNGASSELQSLVPMLRQFRSPLVGILGNAHSPLGAEVDVLLDASVER
EADPHNLAPTASAVTALALGHALAIALMCARNFTPEEFGKFHPGGQLGRNLRLSVREAMHGADEVAFVAPGAALKDVIIA
MTRKPMGGACVVAEAGVLAGFITDGDLRRALTNHDDIRGLTAAEAMTARPVTIGPEATLGQALELMERRRSQISVLPVVD
GDGRALGVVRIHDIYLGVK
>Mature_338_residues
PTANQQPCEHDSSMPTENEWLAAARAAMRIEAESIARAAERLDGELVRAVELILAHPGKVVVTGIGKSGHIARKIVATLC
STGTAAVFLHPAEAAHGDLGIYTPGDPTIVISKNGASSELQSLVPMLRQFRSPLVGILGNAHSPLGAEVDVLLDASVERE
ADPHNLAPTASAVTALALGHALAIALMCARNFTPEEFGKFHPGGQLGRNLRLSVREAMHGADEVAFVAPGAALKDVIIAM
TRKPMGGACVVAEAGVLAGFITDGDLRRALTNHDDIRGLTAAEAMTARPVTIGPEATLGQALELMERRRSQISVLPVVDG
DGRALGVVRIHDIYLGVK

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=315, Percent_Identity=42.2222222222222, Blast_Score=240, Evalue=1e-64,
Organism=Escherichia coli, GI87082151, Length=314, Percent_Identity=41.4012738853503, Blast_Score=217, Evalue=1e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 35507; Mature: 35376

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTANQQPCEHDSSMPTENEWLAAARAAMRIEAESIARAAERLDGELVRAVELILAHPGK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VVVTGIGKSGHIARKIVATLCSTGTAAVFLHPAEAAHGDLGIYTPGDPTIVISKNGASSE
EEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEECCCCCEEEEECCCCHHH
LQSLVPMLRQFRSPLVGILGNAHSPLGAEVDVLLDASVEREADPHNLAPTASAVTALALG
HHHHHHHHHHHHCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
HALAIALMCARNFTPEEFGKFHPGGQLGRNLRLSVREAMHGADEVAFVAPGAALKDVIIA
HHHHHHHHHHCCCCHHHHHCCCCCHHHCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHH
MTRKPMGGACVVAEAGVLAGFITDGDLRRALTNHDDIRGLTAAEAMTARPVTIGPEATLG
HHCCCCCCEEEEECCCEEEEEECCHHHHHHHCCCCHHCCHHHHHHHCCCCEEECCCHHHH
QALELMERRRSQISVLPVVDGDGRALGVVRIHDIYLGVK
HHHHHHHHHHHCEEEEEEECCCCCEEEEEEEEEEEEECC
>Mature Secondary Structure 
PTANQQPCEHDSSMPTENEWLAAARAAMRIEAESIARAAERLDGELVRAVELILAHPGK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VVVTGIGKSGHIARKIVATLCSTGTAAVFLHPAEAAHGDLGIYTPGDPTIVISKNGASSE
EEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEECCCCCEEEEECCCCHHH
LQSLVPMLRQFRSPLVGILGNAHSPLGAEVDVLLDASVEREADPHNLAPTASAVTALALG
HHHHHHHHHHHHCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
HALAIALMCARNFTPEEFGKFHPGGQLGRNLRLSVREAMHGADEVAFVAPGAALKDVIIA
HHHHHHHHHHCCCCHHHHHCCCCCHHHCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHH
MTRKPMGGACVVAEAGVLAGFITDGDLRRALTNHDDIRGLTAAEAMTARPVTIGPEATLG
HHCCCCCCEEEEECCCEEEEEECCHHHHHHHCCCCHHCCHHHHHHHCCCCEEECCCHHHH
QALELMERRRSQISVLPVVDGDGRALGVVRIHDIYLGVK
HHHHHHHHHHHCEEEEEEECCCCCEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]