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The map label for this gene is pepD [C]

Identifier: 116621592

GI number: 116621592

Start: 3143363

End: 3144592

Strand: Direct

Name: pepD [C]

Synonym: Acid_2474

Alternate gene names: 116621592

Gene position: 3143363-3144592 (Clockwise)

Preceding gene: 116621590

Following gene: 116621593

Centisome position: 31.54

GC content: 66.18

Gene sequence:

>1230_bases
ATGGCTGCCAATACGGCCTTTACGGGGAATACCGTGACCGAGCTCGCCGACCTTCCCGGAGTGCGCGAGCGCCTCCAGTT
TTTCACGCGCGAAAAGCAATGGATCAACGAGGCGCACCTGCAGCTCTGCCGCGTCCCGGCGCCGACATTCCTGGAACAGG
AACGCGCCGCCTGGTTTTTAGAGCAATTCCGCGTCGCCGGCTGGGATGCCTCCATCGACCGCGCCGGCAACGTGCTGGCC
GCGGCCGGCGAGCCGCCGTACATTGCGCTCACCGCTCACCTCGATACCGTGCTCGCGCCGCGTACCAAAGACGATATCGC
AGTCGATACCGATGGACGCTTTCACGGTGCCGGCGTCAGCGATAACGGCGCCGGGCTGGCCGCCCTGCTGGCAATCGCGC
GCGCCTGGAAGCTTCCCTCCAAGCTGCCCGAATTTCCGCGCGGGCTGCTGCTGGTCGCCAATACCGGCGAAGAAGGCGAG
GGCAACCTGGTCGGCATGCGGCACCTCTGCAGCAAGCAATCGCGGCTGTTCAAGAACATTCACAGCTTCCTGATCGTAGA
TGGCGCCAACACGGACCACATCACCACCCGCGGATTGGGCAGCCGGCGCTTCGAGGTGACCTTCACCGGACCCGGCGGCC
ATAGCTGGAGCGATTTCGGCATCGGCAACCCGGTGCACGCCCTATGCCGCGCCGTCGCCCTGTTCGCCGAGACGCGCCTG
GATTCGGGCCCGAAATCGTCGATCAATGTCGGTCTCATCGAAGGCGGCACCGGCGTCAACGCGATTGCTCAAACGGCGCG
CTGCAAGGTGGATATCCGCTCCGAAAGCAACGAGCGCATGGACCAACTGGTGGACGTGCTGGCGAGCGCCGTGGACCGCG
CACGCGACTTGGAAAACCAGCGCGCCAGCGGCGGACGGGTCGCGGCCAAAACCAAGGAGATCGGCTCGCGGCCGGCCGCG
ACGCTGCCCGAACAGGCGCCCATCCTGCAATATGTGCGCGCGGTGGATTCGCACCTCGGTATTCGGTCGCACCTGGACTG
TTCTTCCACCGATGCCAACATCCCGCTCGCCATGGGCATCCCCGCGCTCGCCATGGGCGCCGGCGGACTCGGCGGCGGCG
CCCATACCCCGCAGGAATGGTTCAGCCCCGATGGACGCGATCTTGGCCTCAAACGCATCCTGCTCACTCTCCTGCTCCTG
ATCCGCGACCCCGGGGGCAGCGGGAAGTGA

Upstream 100 bases:

>100_bases
CATGTTCCCAGTGTGGGTTCCATCTCCTTTTGGGTCAATGAGGTAGTTATTTTCGTGGCGCGATTCATTACACTTCTTGA
CTGCTACACTGGCAGGGAGA

Downstream 100 bases:

>100_bases
ACCGCCGCAAGGCGGACCTGGCGCTGCTCTTTAACGCCTTCATCTGGGGTAGCACCTTCATCCTTGTGAAATCGTCGCTG
AGCTACATTTCTCCCTTATT

Product: peptidase dimerisation domain-containing protein

Products: Hydrolysed Xaa-|-His Dipeptides [C]

Alternate protein names: Peptidase; Acetylornithine Deacetylase; Peptidase Dimerization Domain Protein; Peptidase T; Aminoacyl-Histidine Dipeptidase; M20/M25/M40 Family Peptidase; Peptidase Dimerisation Domain Protein; Peptidase Dimerisation Domain-Containing Protein

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MAANTAFTGNTVTELADLPGVRERLQFFTREKQWINEAHLQLCRVPAPTFLEQERAAWFLEQFRVAGWDASIDRAGNVLA
AAGEPPYIALTAHLDTVLAPRTKDDIAVDTDGRFHGAGVSDNGAGLAALLAIARAWKLPSKLPEFPRGLLLVANTGEEGE
GNLVGMRHLCSKQSRLFKNIHSFLIVDGANTDHITTRGLGSRRFEVTFTGPGGHSWSDFGIGNPVHALCRAVALFAETRL
DSGPKSSINVGLIEGGTGVNAIAQTARCKVDIRSESNERMDQLVDVLASAVDRARDLENQRASGGRVAAKTKEIGSRPAA
TLPEQAPILQYVRAVDSHLGIRSHLDCSSTDANIPLAMGIPALAMGAGGLGGGAHTPQEWFSPDGRDLGLKRILLTLLLL
IRDPGGSGK

Sequences:

>Translated_409_residues
MAANTAFTGNTVTELADLPGVRERLQFFTREKQWINEAHLQLCRVPAPTFLEQERAAWFLEQFRVAGWDASIDRAGNVLA
AAGEPPYIALTAHLDTVLAPRTKDDIAVDTDGRFHGAGVSDNGAGLAALLAIARAWKLPSKLPEFPRGLLLVANTGEEGE
GNLVGMRHLCSKQSRLFKNIHSFLIVDGANTDHITTRGLGSRRFEVTFTGPGGHSWSDFGIGNPVHALCRAVALFAETRL
DSGPKSSINVGLIEGGTGVNAIAQTARCKVDIRSESNERMDQLVDVLASAVDRARDLENQRASGGRVAAKTKEIGSRPAA
TLPEQAPILQYVRAVDSHLGIRSHLDCSSTDANIPLAMGIPALAMGAGGLGGGAHTPQEWFSPDGRDLGLKRILLTLLLL
IRDPGGSGK
>Mature_408_residues
AANTAFTGNTVTELADLPGVRERLQFFTREKQWINEAHLQLCRVPAPTFLEQERAAWFLEQFRVAGWDASIDRAGNVLAA
AGEPPYIALTAHLDTVLAPRTKDDIAVDTDGRFHGAGVSDNGAGLAALLAIARAWKLPSKLPEFPRGLLLVANTGEEGEG
NLVGMRHLCSKQSRLFKNIHSFLIVDGANTDHITTRGLGSRRFEVTFTGPGGHSWSDFGIGNPVHALCRAVALFAETRLD
SGPKSSINVGLIEGGTGVNAIAQTARCKVDIRSESNERMDQLVDVLASAVDRARDLENQRASGGRVAAKTKEIGSRPAAT
LPEQAPILQYVRAVDSHLGIRSHLDCSSTDANIPLAMGIPALAMGAGGLGGGAHTPQEWFSPDGRDLGLKRILLTLLLLI
RDPGGSGK

Specific function: This Dipeptidase Has Specificity For The Unusual Dipeptide Beta-Alanyl-L-Histidine. [C]

COG id: COG2195

COG function: function code E; Di- and tripeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.13.3 [C]

Molecular weight: Translated: 43637; Mature: 43506

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAANTAFTGNTVTELADLPGVRERLQFFTREKQWINEAHLQLCRVPAPTFLEQERAAWFL
CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
EQFRVAGWDASIDRAGNVLAAAGEPPYIALTAHLDTVLAPRTKDDIAVDTDGRFHGAGVS
HHHHHCCCCCCHHHCCCEEEECCCCCEEEEEECHHHHHCCCCCCCEEECCCCCEECCCCC
DNGAGLAALLAIARAWKLPSKLPEFPRGLLLVANTGEEGEGNLVGMRHLCSKQSRLFKNI
CCCCHHHHHHHHHHHHCCCHHCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHH
HSFLIVDGANTDHITTRGLGSRRFEVTFTGPGGHSWSDFGIGNPVHALCRAVALFAETRL
HHEEEEECCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
DSGPKSSINVGLIEGGTGVNAIAQTARCKVDIRSESNERMDQLVDVLASAVDRARDLENQ
CCCCCCCCEEEEEECCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
RASGGRVAAKTKEIGSRPAATLPEQAPILQYVRAVDSHLGIRSHLDCSSTDANIPLAMGI
CCCCCEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHCC
PALAMGAGGLGGGAHTPQEWFSPDGRDLGLKRILLTLLLLIRDPGGSGK
CHHHHCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AANTAFTGNTVTELADLPGVRERLQFFTREKQWINEAHLQLCRVPAPTFLEQERAAWFL
CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
EQFRVAGWDASIDRAGNVLAAAGEPPYIALTAHLDTVLAPRTKDDIAVDTDGRFHGAGVS
HHHHHCCCCCCHHHCCCEEEECCCCCEEEEEECHHHHHCCCCCCCEEECCCCCEECCCCC
DNGAGLAALLAIARAWKLPSKLPEFPRGLLLVANTGEEGEGNLVGMRHLCSKQSRLFKNI
CCCCHHHHHHHHHHHHCCCHHCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHH
HSFLIVDGANTDHITTRGLGSRRFEVTFTGPGGHSWSDFGIGNPVHALCRAVALFAETRL
HHEEEEECCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
DSGPKSSINVGLIEGGTGVNAIAQTARCKVDIRSESNERMDQLVDVLASAVDRARDLENQ
CCCCCCCCEEEEEECCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
RASGGRVAAKTKEIGSRPAATLPEQAPILQYVRAVDSHLGIRSHLDCSSTDANIPLAMGI
CCCCCEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHCC
PALAMGAGGLGGGAHTPQEWFSPDGRDLGLKRILLTLLLLIRDPGGSGK
CHHHHCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Xaa-|-His Dipeptides [C]

Specific reaction: Hydrolysis Of Xaa-|-His Dipeptides. [C]

General reaction: Carboxylic acid amide hydrolysis (dipeptide hydrolase [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA