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The map label for this gene is 116621534

Identifier: 116621534

GI number: 116621534

Start: 3078580

End: 3079959

Strand: Direct

Name: 116621534

Synonym: Acid_2416

Alternate gene names: NA

Gene position: 3078580-3079959 (Clockwise)

Preceding gene: 116621525

Following gene: 116621537

Centisome position: 30.89

GC content: 62.32

Gene sequence:

>1380_bases
GTGAAACTTGCCCGTTCGATAGCGCTGACGCTGCTGATTGCGATCTCGGCCGTTGCCGCCGATACCGCCCTTGACCGCTA
CGTCAAGAAACCGGACGCCACCTACAAGTACGAGATCGTCAATACGGTGAAAGGTGAAGGCTTCACTACGTATATCGTGG
ATCTGACCTCGCAAACGTGGCGCACGCCGGCGGAAGTCAATCGCACGGTGTGGAAGCACTGGCTGACGATCGTGAAGCCG
GACCGGGTGGCGACGAGCACCGGTTTTCTATTCATCACAGGCGGGTCGGTGGGGCGCAAGGCGCCGCAATCCGCGAATGC
GACGTATACCGAGAACGCGCTGGTGACGCACTCCGTGGTGGCCGAGTTGCAGGACGTGCCTAACGAGCCGCTGCGCTTCG
CCGGCGAGACGCGTGACCGCAACGAGGACGGCATCATCGCCTATACCTGGGTCAAGTTCATGAAGGGGGGAGATGAGGAG
TGGCCGCTGCGCCTGCCGATGACGAAGGCCGCGGTGCGCGCCATGGACACGATTTCGGCGATCATGGCCACGCCCGACGC
CGGCGGAGTGAAGGTGGAGAAGTACGTGGTCTCGGGCGGCTCCAAACGCGGCTGGACCAGTTGGGCCACGGCGGCGGTGG
ACCCGCGCATCGCGGCGGTGATCCCGGTCTCGATCGATACGCTCAACCTGGAGAAGACCTTCGAGCATCACTATCGCGTG
TTCGGCTTTTTCTCGGAGGCGGTGAAGGACTACGTGGAGAGCGGCGTGATGGATTGGAACGGCACGCCCGAGTATCGGAA
GCTGCTCGCGGTGGAAGATCCGTACAGCTATCGCGAGCGCTATACCATGCCGAAGTACATGATTCAGGCGGCGGGCGACC
AGTACTTCCTGCCCGACTCCTCGCGCTACTATTTCGACGATCTGAAGGGCGAGAAGTACCTGCGCTACATCCCGAACACC
GATCACGGATTGCGCAATACGGACGCTCGGGAGAGCAGCCTCGCGTTTTATCAAGCCTTCCTCGCAGGCACGCCGCGGCC
GCAGTTTTCCTGGAAGTTCGAGGCCAACGGAGATATTAAGGTGACCAGCAGGACCAAGCCGGAGGCCGTCAAGATATGGC
AGGCGGCGAATCCGGACGCACGCGATTTCCGTCTGATGACGATCGGTCCGGCTTATCAGGGCTCGGAGTTGCAGGACCAG
GGCGGCGGCGTTTACGTGGCGCACGCGCGCCCGCCGGCGAAGGGATGGACGGCGTACTTCGTCGAGCTGACGTACCCGAG
CGGCGGCAAGTATCCCTTCAAGTTCACGACGGCGGTGCGGGTGAATCCCGATACGGAGCCGTTCCCGGCGTACAAGCCGG
ATCCCGAAAAGAGGAAGTAG

Upstream 100 bases:

>100_bases
AGAGATGCCTCCAGGCTGTTGAGTAACACACGGACATTCCGGATGCAAGGCACTTCTTAAGAAAAGGATACAGTTAAGAT
TGGTTCGCAGGAGGAGCACT

Downstream 100 bases:

>100_bases
AGTAGTGGGCTGGCTTGGTGAGAGTTGGCGATCGTGAAGGGCGGCGGGTTGCCTAGCGTGAGCGGAGAAGCCGCCTGAAA
GGCGGCTGCACGGTCGAAAA

Product: PhoPQ-activated pathogenicity-like protein

Products: NA

Alternate protein names: Phopq-Activated Pathogenicity-Related Protein Pqaa Type; Transmembrane Protein; PhoPQ-Activated Pathogenicity-Related Protein; PhoPQ-Activated Pathogenicity-Like Protein PqaA Type; PhoPQ-Activated Pathogenicity-Related Protein PqaA Type; Secreted Protein; PhoPQ-Activated Pathogenicity-Like Protein

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MKLARSIALTLLIAISAVAADTALDRYVKKPDATYKYEIVNTVKGEGFTTYIVDLTSQTWRTPAEVNRTVWKHWLTIVKP
DRVATSTGFLFITGGSVGRKAPQSANATYTENALVTHSVVAELQDVPNEPLRFAGETRDRNEDGIIAYTWVKFMKGGDEE
WPLRLPMTKAAVRAMDTISAIMATPDAGGVKVEKYVVSGGSKRGWTSWATAAVDPRIAAVIPVSIDTLNLEKTFEHHYRV
FGFFSEAVKDYVESGVMDWNGTPEYRKLLAVEDPYSYRERYTMPKYMIQAAGDQYFLPDSSRYYFDDLKGEKYLRYIPNT
DHGLRNTDARESSLAFYQAFLAGTPRPQFSWKFEANGDIKVTSRTKPEAVKIWQAANPDARDFRLMTIGPAYQGSELQDQ
GGGVYVAHARPPAKGWTAYFVELTYPSGGKYPFKFTTAVRVNPDTEPFPAYKPDPEKRK

Sequences:

>Translated_459_residues
MKLARSIALTLLIAISAVAADTALDRYVKKPDATYKYEIVNTVKGEGFTTYIVDLTSQTWRTPAEVNRTVWKHWLTIVKP
DRVATSTGFLFITGGSVGRKAPQSANATYTENALVTHSVVAELQDVPNEPLRFAGETRDRNEDGIIAYTWVKFMKGGDEE
WPLRLPMTKAAVRAMDTISAIMATPDAGGVKVEKYVVSGGSKRGWTSWATAAVDPRIAAVIPVSIDTLNLEKTFEHHYRV
FGFFSEAVKDYVESGVMDWNGTPEYRKLLAVEDPYSYRERYTMPKYMIQAAGDQYFLPDSSRYYFDDLKGEKYLRYIPNT
DHGLRNTDARESSLAFYQAFLAGTPRPQFSWKFEANGDIKVTSRTKPEAVKIWQAANPDARDFRLMTIGPAYQGSELQDQ
GGGVYVAHARPPAKGWTAYFVELTYPSGGKYPFKFTTAVRVNPDTEPFPAYKPDPEKRK
>Mature_459_residues
MKLARSIALTLLIAISAVAADTALDRYVKKPDATYKYEIVNTVKGEGFTTYIVDLTSQTWRTPAEVNRTVWKHWLTIVKP
DRVATSTGFLFITGGSVGRKAPQSANATYTENALVTHSVVAELQDVPNEPLRFAGETRDRNEDGIIAYTWVKFMKGGDEE
WPLRLPMTKAAVRAMDTISAIMATPDAGGVKVEKYVVSGGSKRGWTSWATAAVDPRIAAVIPVSIDTLNLEKTFEHHYRV
FGFFSEAVKDYVESGVMDWNGTPEYRKLLAVEDPYSYRERYTMPKYMIQAAGDQYFLPDSSRYYFDDLKGEKYLRYIPNT
DHGLRNTDARESSLAFYQAFLAGTPRPQFSWKFEANGDIKVTSRTKPEAVKIWQAANPDARDFRLMTIGPAYQGSELQDQ
GGGVYVAHARPPAKGWTAYFVELTYPSGGKYPFKFTTAVRVNPDTEPFPAYKPDPEKRK

Specific function: Unknown

COG id: COG4287

COG function: function code R; PhoPQ-activated pathogenicity-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51549; Mature: 51549

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLARSIALTLLIAISAVAADTALDRYVKKPDATYKYEIVNTVKGEGFTTYIVDLTSQTW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEEEECCCCC
RTPAEVNRTVWKHWLTIVKPDRVATSTGFLFITGGSVGRKAPQSANATYTENALVTHSVV
CCHHHHHHHHHHHHHEEECCCCEEECCCEEEEECCCCCCCCCCCCCCEECCCCHHHHHHH
AELQDVPNEPLRFAGETRDRNEDGIIAYTWVKFMKGGDEEWPLRLPMTKAAVRAMDTISA
HHHHHCCCCCHHHCCCCCCCCCCCEEEEEEHHHHCCCCCCCCEECCHHHHHHHHHHHHHH
IMATPDAGGVKVEKYVVSGGSKRGWTSWATAAVDPRIAAVIPVSIDTLNLEKTFEHHYRV
HHCCCCCCCEEEEEEEEECCCCCCCCCHHHHCCCCCEEEEEEEEEEEECHHHHHHHHHHH
FGFFSEAVKDYVESGVMDWNGTPEYRKLLAVEDPYSYRERYTMPKYMIQAAGDQYFLPDS
HHHHHHHHHHHHHCCCCCCCCCHHHHEEEEECCCHHHHHHCCCHHHHHHHCCCEEECCCC
SRYYFDDLKGEKYLRYIPNTDHGLRNTDARESSLAFYQAFLAGTPRPQFSWKFEANGDIK
CCEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCEE
VTSRTKPEAVKIWQAANPDARDFRLMTIGPAYQGSELQDQGGGVYVAHARPPAKGWTAYF
EECCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEE
VELTYPSGGKYPFKFTTAVRVNPDTEPFPAYKPDPEKRK
EEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLARSIALTLLIAISAVAADTALDRYVKKPDATYKYEIVNTVKGEGFTTYIVDLTSQTW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEEEECCCCC
RTPAEVNRTVWKHWLTIVKPDRVATSTGFLFITGGSVGRKAPQSANATYTENALVTHSVV
CCHHHHHHHHHHHHHEEECCCCEEECCCEEEEECCCCCCCCCCCCCCEECCCCHHHHHHH
AELQDVPNEPLRFAGETRDRNEDGIIAYTWVKFMKGGDEEWPLRLPMTKAAVRAMDTISA
HHHHHCCCCCHHHCCCCCCCCCCCEEEEEEHHHHCCCCCCCCEECCHHHHHHHHHHHHHH
IMATPDAGGVKVEKYVVSGGSKRGWTSWATAAVDPRIAAVIPVSIDTLNLEKTFEHHYRV
HHCCCCCCCEEEEEEEEECCCCCCCCCHHHHCCCCCEEEEEEEEEEEECHHHHHHHHHHH
FGFFSEAVKDYVESGVMDWNGTPEYRKLLAVEDPYSYRERYTMPKYMIQAAGDQYFLPDS
HHHHHHHHHHHHHCCCCCCCCCHHHHEEEEECCCHHHHHHCCCHHHHHHHCCCEEECCCC
SRYYFDDLKGEKYLRYIPNTDHGLRNTDARESSLAFYQAFLAGTPRPQFSWKFEANGDIK
CCEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCEE
VTSRTKPEAVKIWQAANPDARDFRLMTIGPAYQGSELQDQGGGVYVAHARPPAKGWTAYF
EECCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEE
VELTYPSGGKYPFKFTTAVRVNPDTEPFPAYKPDPEKRK
EEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA