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The map label for this gene is yagT [H]

Identifier: 116621537

GI number: 116621537

Start: 3081580

End: 3082203

Strand: Direct

Name: yagT [H]

Synonym: Acid_2419

Alternate gene names: 116621537

Gene position: 3081580-3082203 (Clockwise)

Preceding gene: 116621534

Following gene: 116621538

Centisome position: 30.92

GC content: 62.02

Gene sequence:

>624_bases
GTGAGTTCAACGAAAGACCCTAAACCCAAGAACGCCGTCTCCCGCCGCGGATTCCTCGGCGGAATGGGGATCGGCACCGG
CGCAGTGGGCGCGGGCATCCTGGAAAGAGAAGCCATCGCCGCGCCTGCCCCGGCCAACGTGGTTGGACCGGGCGCCGTTC
CCATCACACTCAGCATCAACGGAAAGCCCGTCAGCCTGACGGTAGAGCCCAGCGTGACCCTGCTGGATGCCCTGCGCAAT
CATTTGGATTACACAGGCGCGAAGAAGGTCTGCGACCGCGGCACATGCGGAGCCTGTACGATGATCGTCGCCGGCAAGAC
TGTTTACGCCTGCAGCGTGCTGGCGATCGACGCGCAGGGGAAGACGATCGAGACCATCGAAGGTCTTCCGGTCAACAACC
CGATTTCCACCGCGTTCGTGAACCACGACGCGCAACAGTGCGGCTACTGTACGCCAGGCTTCGTCATGGCGACCAAGGGG
TTCCTCTCCGAACATCCGAACCCCACGGTGGAAGACGTAAAGCACGGGCTGGGCGGCAATCTCTGCCGCTGCGGCACGTA
TATGGGCATACGCCAGGCTGTGGTGGAAGCCGCGAAAAATATGAAGGGGGCGAAGAATGGCTAA

Upstream 100 bases:

>100_bases
GCATGAAGGCGCCTTAACCTTTCCGCTCCATTTCTGCTATATTTGTGTCGAATTCCGAATCAGCACTCATGTATCGCGCA
CCACGAAAGGAAGGTCTCTG

Downstream 100 bases:

>100_bases
CACACCGGACTATAGCTGGCCGCCGATGGCGGATCGCAAAATCATGGGCAAGCCCTTCAAGCGCCTGGACGGCCCACTGA
AGGCCGCGGGCCGCGCCAAG

Product: 2Fe-2S iron-sulfur cluster binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MSSTKDPKPKNAVSRRGFLGGMGIGTGAVGAGILEREAIAAPAPANVVGPGAVPITLSINGKPVSLTVEPSVTLLDALRN
HLDYTGAKKVCDRGTCGACTMIVAGKTVYACSVLAIDAQGKTIETIEGLPVNNPISTAFVNHDAQQCGYCTPGFVMATKG
FLSEHPNPTVEDVKHGLGGNLCRCGTYMGIRQAVVEAAKNMKGAKNG

Sequences:

>Translated_207_residues
MSSTKDPKPKNAVSRRGFLGGMGIGTGAVGAGILEREAIAAPAPANVVGPGAVPITLSINGKPVSLTVEPSVTLLDALRN
HLDYTGAKKVCDRGTCGACTMIVAGKTVYACSVLAIDAQGKTIETIEGLPVNNPISTAFVNHDAQQCGYCTPGFVMATKG
FLSEHPNPTVEDVKHGLGGNLCRCGTYMGIRQAVVEAAKNMKGAKNG
>Mature_206_residues
SSTKDPKPKNAVSRRGFLGGMGIGTGAVGAGILEREAIAAPAPANVVGPGAVPITLSINGKPVSLTVEPSVTLLDALRNH
LDYTGAKKVCDRGTCGACTMIVAGKTVYACSVLAIDAQGKTIETIEGLPVNNPISTAFVNHDAQQCGYCTPGFVMATKGF
LSEHPNPTVEDVKHGLGGNLCRCGTYMGIRQAVVEAAKNMKGAKNG

Specific function: Iron-sulfur subunit of the xanthine dehydrogenase complex [H]

COG id: COG2080

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI91823271, Length=160, Percent_Identity=32.5, Blast_Score=68, Evalue=7e-12,
Organism=Escherichia coli, GI1786480, Length=182, Percent_Identity=41.2087912087912, Blast_Score=137, Evalue=6e-34,
Organism=Escherichia coli, GI1789232, Length=153, Percent_Identity=37.9084967320261, Blast_Score=98, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17540638, Length=166, Percent_Identity=36.144578313253, Blast_Score=100, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17539860, Length=154, Percent_Identity=36.3636363636364, Blast_Score=98, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI32566215, Length=154, Percent_Identity=35.7142857142857, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24647201, Length=151, Percent_Identity=38.4105960264901, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24647199, Length=150, Percent_Identity=37.3333333333333, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24647197, Length=158, Percent_Identity=32.9113924050633, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24647195, Length=158, Percent_Identity=32.9113924050633, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI17737937, Length=153, Percent_Identity=32.6797385620915, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24647193, Length=156, Percent_Identity=31.4102564102564, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002888
- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]

EC number: NA

Molecular weight: Translated: 21225; Mature: 21094

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTKDPKPKNAVSRRGFLGGMGIGTGAVGAGILEREAIAAPAPANVVGPGAVPITLSIN
CCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEEEC
GKPVSLTVEPSVTLLDALRNHLDYTGAKKVCDRGTCGACTMIVAGKTVYACSVLAIDAQG
CEEEEEEECCCHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEECCCEEEEEEEEECCCC
KTIETIEGLPVNNPISTAFVNHDAQQCGYCTPGFVMATKGFLSEHPNPTVEDVKHGLGGN
CEEEEECCCCCCCCCCCEEECCCHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCC
LCRCGTYMGIRQAVVEAAKNMKGAKNG
EEHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SSTKDPKPKNAVSRRGFLGGMGIGTGAVGAGILEREAIAAPAPANVVGPGAVPITLSIN
CCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEEEC
GKPVSLTVEPSVTLLDALRNHLDYTGAKKVCDRGTCGACTMIVAGKTVYACSVLAIDAQG
CEEEEEEECCCHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEECCCEEEEEEEEECCCC
KTIETIEGLPVNNPISTAFVNHDAQQCGYCTPGFVMATKGFLSEHPNPTVEDVKHGLGGN
CEEEEECCCCCCCCCCCEEECCCHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCC
LCRCGTYMGIRQAVVEAAKNMKGAKNG
EEHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]