| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621363
Identifier: 116621363
GI number: 116621363
Start: 2869066
End: 2869758
Strand: Reverse
Name: 116621363
Synonym: Acid_2244
Alternate gene names: NA
Gene position: 2869758-2869066 (Counterclockwise)
Preceding gene: 116621364
Following gene: 116621362
Centisome position: 28.8
GC content: 54.26
Gene sequence:
>693_bases TTGGCAATCAATCCTGTCCGCCCATTCCGGATTTTCCAACTGATCGAGTCGCTGCCGGCTGAGCGGATCGCCAAGGTACC CATCCCTTCACACCGGGGAGCCGGCGGGCTCACTCTTCTTGAAACATTTCTCACAATCGCCGCGGCCCGCATCGTGGCCG CACGCCGTATTTTTGAATTCGGAACCTATCTTGGCGCCACCACTCTGAACCTGGCTCTCAACACGCCGGAGGACGCCGAA ATCTTTACACTGGACCTGGATGAACGCCACGCCGAAGAGCTCATCCAGGATGCCGCCGACGCAACTCTGACTAAGTCGCA TATCTCGGCCGCCCGGTCGCTCGATTATATGGACATCCCCGCGGGCCGAAAGGTCAAAGCATTGATGGGTGATTCGACCA AGTTCGATTTTTCCGACTGGAAGGGCTCGATGGATTTGATTTTCGTGGACGGCGGACACGATCTTGCGACAGTTACCTCC GACACCACGAACGCCCTTAATTTGGCCGATCCCGGCAAACTGTCGTGCATTATTTGGCACGATTACGGGAACCCGCAATA CGTCCCGCTGACCAGCTATCTCGATGAACTCTCCGAACGATTGCAGATTTTTCACATAGAAGATACGATGCTTTGTGTTT GGTTCAATGATCCCTTGAAATCCATTGGACCTCGTCTGTTGAACCTCCAATGA
Upstream 100 bases:
>100_bases GTCCTGGCTGCCACACCTCCCGTTAATGCAAGTCCGTCTGAACGCTCCGATGCGGTGGCCGGGAGTTAATTTCGTAAAAT CCTCACTGGGAGAGATCAAC
Downstream 100 bases:
>100_bases AGCTCCTATTAACCAGATCATGATTAAGCTTTCCGACTACGTTATGGGTTTTGTGGCGAACAGCGGCGTCAAGCACGTCT TCCTGGTCGTCGGCGGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MAINPVRPFRIFQLIESLPAERIAKVPIPSHRGAGGLTLLETFLTIAAARIVAARRIFEFGTYLGATTLNLALNTPEDAE IFTLDLDERHAEELIQDAADATLTKSHISAARSLDYMDIPAGRKVKALMGDSTKFDFSDWKGSMDLIFVDGGHDLATVTS DTTNALNLADPGKLSCIIWHDYGNPQYVPLTSYLDELSERLQIFHIEDTMLCVWFNDPLKSIGPRLLNLQ
Sequences:
>Translated_230_residues MAINPVRPFRIFQLIESLPAERIAKVPIPSHRGAGGLTLLETFLTIAAARIVAARRIFEFGTYLGATTLNLALNTPEDAE IFTLDLDERHAEELIQDAADATLTKSHISAARSLDYMDIPAGRKVKALMGDSTKFDFSDWKGSMDLIFVDGGHDLATVTS DTTNALNLADPGKLSCIIWHDYGNPQYVPLTSYLDELSERLQIFHIEDTMLCVWFNDPLKSIGPRLLNLQ >Mature_229_residues AINPVRPFRIFQLIESLPAERIAKVPIPSHRGAGGLTLLETFLTIAAARIVAARRIFEFGTYLGATTLNLALNTPEDAEI FTLDLDERHAEELIQDAADATLTKSHISAARSLDYMDIPAGRKVKALMGDSTKFDFSDWKGSMDLIFVDGGHDLATVTSD TTNALNLADPGKLSCIIWHDYGNPQYVPLTSYLDELSERLQIFHIEDTMLCVWFNDPLKSIGPRLLNLQ
Specific function: Unknown
COG id: COG4122
COG function: function code R; Predicted O-methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25503; Mature: 25372
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAINPVRPFRIFQLIESLPAERIAKVPIPSHRGAGGLTLLETFLTIAAARIVAARRIFEF CCCCCCCHHHHHHHHHHCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GTYLGATTLNLALNTPEDAEIFTLDLDERHAEELIQDAADATLTKSHISAARSLDYMDIP HHHHCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC AGRKVKALMGDSTKFDFSDWKGSMDLIFVDGGHDLATVTSDTTNALNLADPGKLSCIIWH CCCEEEEEECCCCCCCHHCCCCCEEEEEEECCCCEEEEECCCCCEEECCCCCCEEEEEEE DYGNPQYVPLTSYLDELSERLQIFHIEDTMLCVWFNDPLKSIGPRLLNLQ CCCCCEEEEHHHHHHHHHHHEEEEEECCEEEEEEECCCHHHHCCEEECCC >Mature Secondary Structure AINPVRPFRIFQLIESLPAERIAKVPIPSHRGAGGLTLLETFLTIAAARIVAARRIFEF CCCCCCHHHHHHHHHHCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GTYLGATTLNLALNTPEDAEIFTLDLDERHAEELIQDAADATLTKSHISAARSLDYMDIP HHHHCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC AGRKVKALMGDSTKFDFSDWKGSMDLIFVDGGHDLATVTSDTTNALNLADPGKLSCIIWH CCCEEEEEECCCCCCCHHCCCCCEEEEEEECCCCEEEEECCCCCEEECCCCCCEEEEEEE DYGNPQYVPLTSYLDELSERLQIFHIEDTMLCVWFNDPLKSIGPRLLNLQ CCCCCEEEEHHHHHHHHHHHEEEEEECCEEEEEEECCCHHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA