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The map label for this gene is sgbU [C]

Identifier: 116621361

GI number: 116621361

Start: 2866363

End: 2867223

Strand: Reverse

Name: sgbU [C]

Synonym: Acid_2242

Alternate gene names: 116621361

Gene position: 2867223-2866363 (Counterclockwise)

Preceding gene: 116621362

Following gene: 116621360

Centisome position: 28.77

GC content: 61.79

Gene sequence:

>861_bases
GTGATCCGCATCGGACAAATGCAAGGACGCCTGTCCCCTCCGGAAGGCGGACGAATTCAGTTTTTCCCGCGCCTGCGCTG
GCAGGACGAATTTGCCCTCGCGGCGGAAGCGGGGTTCGATCAGATCGAATGGCTTTACGACGAATGGGGCGAGCAACATA
ATCCACTCGCCGGCAACGAGGGCACGCGCACCATCGGCCTTCTTTCGAAACAGAGCGGGGTCGCGGTTCATTCCCTCTGC
GCCCACTACTTCGTCGAACATCCTTTTGTGAACAGCAGCGGGCGCGATCTTCAGTCCCTGGTGGATAAGCTGGAGTGGCT
CGTGACCCGCTGCGCAGCCGCCAAGATCCGGCGCGTGATCGTACCCTTTCTGGACCAGGGTTCGATCCGGAACGAAGATC
ATGAGCGTTGCGCGATGGATGTTCTCAACAGCGTGCTTCCCGGCGCCGTCGCGCATTCGGTGGAACTCCATCTGGAAACG
GACCTTGCCCCCATCGCGTACGGACGCTTCCTGGAAAAGATGACCAGCCCGGCAATCCGCGCCACTTACGATACCGGCAA
CAGCACCTCCTTCGGCTTCGATGTCATTGACGAGATCGCCGCTTACGGCTCGCGTATCGGCAGCGTTCACATCAAAGACC
GCCTTCGCCGTGGTGGCAGCGTTCCCCTGGGCGAGGGCGAGGCGAATCTTTCTTTTCGCCTGGCGGCGCTCCTTGCCACC
GGATATCGCGGGGATTTCGTACTCGAGGCTGCCCGCGGCGAAGCCGGCGGCGAACTCGCCTGGGCCCGCCGCAACCTCGA
TGTCGTGAAGCAGCAATTCGCGAAAGCCAACTGCCTCGCCCGCGGGAACTACTCGACATGA

Upstream 100 bases:

>100_bases
CGTTCGTGTCCAAGCCGCTGGAGGATCTCTGGCCCTTTCTCGATCGCGCCGAATTTGAGGCCAACATGCTACGGCCGACT
GCCGGGGAGCCCGTCGCTTC

Downstream 100 bases:

>100_bases
AAATTCTGATCGTCGGACTGGGCAGCATCGGCCAGCGCCACGTGCGCAATCTGCGCGCGCTGCTGGGTGAGGAAACCGAA
CTCCTCGCATGGCGCGTCCG

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase-Like TIM Barrel

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MIRIGQMQGRLSPPEGGRIQFFPRLRWQDEFALAAEAGFDQIEWLYDEWGEQHNPLAGNEGTRTIGLLSKQSGVAVHSLC
AHYFVEHPFVNSSGRDLQSLVDKLEWLVTRCAAAKIRRVIVPFLDQGSIRNEDHERCAMDVLNSVLPGAVAHSVELHLET
DLAPIAYGRFLEKMTSPAIRATYDTGNSTSFGFDVIDEIAAYGSRIGSVHIKDRLRRGGSVPLGEGEANLSFRLAALLAT
GYRGDFVLEAARGEAGGELAWARRNLDVVKQQFAKANCLARGNYST

Sequences:

>Translated_286_residues
MIRIGQMQGRLSPPEGGRIQFFPRLRWQDEFALAAEAGFDQIEWLYDEWGEQHNPLAGNEGTRTIGLLSKQSGVAVHSLC
AHYFVEHPFVNSSGRDLQSLVDKLEWLVTRCAAAKIRRVIVPFLDQGSIRNEDHERCAMDVLNSVLPGAVAHSVELHLET
DLAPIAYGRFLEKMTSPAIRATYDTGNSTSFGFDVIDEIAAYGSRIGSVHIKDRLRRGGSVPLGEGEANLSFRLAALLAT
GYRGDFVLEAARGEAGGELAWARRNLDVVKQQFAKANCLARGNYST
>Mature_286_residues
MIRIGQMQGRLSPPEGGRIQFFPRLRWQDEFALAAEAGFDQIEWLYDEWGEQHNPLAGNEGTRTIGLLSKQSGVAVHSLC
AHYFVEHPFVNSSGRDLQSLVDKLEWLVTRCAAAKIRRVIVPFLDQGSIRNEDHERCAMDVLNSVLPGAVAHSVELHLET
DLAPIAYGRFLEKMTSPAIRATYDTGNSTSFGFDVIDEIAAYGSRIGSVHIKDRLRRGGSVPLGEGEANLSFRLAALLAT
GYRGDFVLEAARGEAGGELAWARRNLDVVKQQFAKANCLARGNYST

Specific function: Isomerization Of D-Arabino-6-Hexulose 3-Phosphate To D-Fructose 6-Phosphate. [C]

COG id: COG3623

COG function: function code G; Putative L-xylulose-5-phosphate 3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.-.-.- [C]

Molecular weight: Translated: 31545; Mature: 31545

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRIGQMQGRLSPPEGGRIQFFPRLRWQDEFALAAEAGFDQIEWLYDEWGEQHNPLAGNE
CEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC
GTRTIGLLSKQSGVAVHSLCAHYFVEHPFVNSSGRDLQSLVDKLEWLVTRCAAAKIRRVI
CCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VPFLDQGSIRNEDHERCAMDVLNSVLPGAVAHSVELHLETDLAPIAYGRFLEKMTSPAIR
HHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHEEEEEEECCCHHHHHHHHHHHHCCCCEE
ATYDTGNSTSFGFDVIDEIAAYGSRIGSVHIKDRLRRGGSVPLGEGEANLSFRLAALLAT
EEECCCCCCCCCHHHHHHHHHHHHHCCCEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC
GYRGDFVLEAARGEAGGELAWARRNLDVVKQQFAKANCLARGNYST
CCCCCEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIRIGQMQGRLSPPEGGRIQFFPRLRWQDEFALAAEAGFDQIEWLYDEWGEQHNPLAGNE
CEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC
GTRTIGLLSKQSGVAVHSLCAHYFVEHPFVNSSGRDLQSLVDKLEWLVTRCAAAKIRRVI
CCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VPFLDQGSIRNEDHERCAMDVLNSVLPGAVAHSVELHLETDLAPIAYGRFLEKMTSPAIR
HHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHEEEEEEECCCHHHHHHHHHHHHCCCCEE
ATYDTGNSTSFGFDVIDEIAAYGSRIGSVHIKDRLRRGGSVPLGEGEANLSFRLAALLAT
EEECCCCCCCCCHHHHHHHHHHHHHCCCEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC
GYRGDFVLEAARGEAGGELAWARRNLDVVKQQFAKANCLARGNYST
CCCCCEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA