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The map label for this gene is glpG [C]

Identifier: 116621336

GI number: 116621336

Start: 2839858

End: 2840598

Strand: Direct

Name: glpG [C]

Synonym: Acid_2217

Alternate gene names: 116621336

Gene position: 2839858-2840598 (Clockwise)

Preceding gene: 116621335

Following gene: 116621337

Centisome position: 28.5

GC content: 59.38

Gene sequence:

>741_bases
ATGCGACAGCCCCGGTATACGTATCGGAGATCCAGCTTCTTCGGCTCCTTCCCTCCGGGAGTGAAGTGGCTGCTTATTGT
CAACACGGTGGTCTTTCTGATCACCAGCCTTTTCGCCCGGCAGTTCGGCGACGATTTCCGCCTGCTGGCGCTTGCGCCGG
TAGCGGTGGTTCAGCACTTTGCGATCTGGCAACTGGTGACGTACCTGTTCTTGCATGGCGGCATCACGCACCTGCTGTTC
AACATGCTGGCGCTTTGGATGTTCGGCACGCCGCTGGAGAGCGACTGGGGGACGCGGCAGTTCCTGAAGTATTATTTCAT
CTGCGGAATCGGCGCGGGCGTGTGCGACGTGGCGATGAACGCGATGATGGGGAACTGGGTGACCAGTACCATCGGCGCCT
CGGGCGCGATCTACGGTCTGCTGCTGGCGTATGGCGTTTGCTATCCCGACCAGACCGTGCTGATGGGTTTCCTGTTCCCG
ATCAAGGCCAAGTACATGGTCATGATCTACGCCGCGATCGAGTTGTACCTCTCCATCGGCGTCAACAACGGCATCAGCAA
CATCGCGCACCTCGGGGGCATGGTGGTGGGCTTCGTTTACCTGAAATCACGGCTGCCGAGGTTGAAGCTTCGCCTTCCGG
ACTGGCAGGGGGCCTACCGGCAATGGAAATTGCAGCGCGCCAAAAAGAAATTCCAGGTTTACATGCGCAAGCACGGCGAT
CGCGGGCCCTGGGTCAACTGA

Upstream 100 bases:

>100_bases
ATGTGCGCACGTTTCCTCAACCGGTACGGAAAAGGCGGAGATCCCGCGGCTTCCTAGAGGTTTTGCAGCGTTCTGATATT
CTAGAGTGAGAGACCTCGCT

Downstream 100 bases:

>100_bases
GATCGGTCAACTGAAGCCCAGAGTTTACCCGAAACCCGCGGGCCACCCACCGCGTCGTTTGATATAGTTACGCTAGAAGT
ACGTCTATGCGATCCATAAA

Product: rhomboid family protein

Products: NA

Alternate protein names: Peptidase; Rhomboid-Like Protein; Integral Membrane Protein; Transmembrane Rhomboid Family Protein; Rhomboid Protein; Cytoplasmic Membrane Protein; Membrane Serine Protease; Integral Membrane Protein Rhomboid Family; GlpG Protein; S54 Family Peptidase; Rhomboid Family Protein/GlpG-Like Protein; Serine Protease; Rhomboid Family Peptidase; Rhomboid Serine Protease; AN1-Type Zinc Finger Protein; GlpG-Like Protein

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MRQPRYTYRRSSFFGSFPPGVKWLLIVNTVVFLITSLFARQFGDDFRLLALAPVAVVQHFAIWQLVTYLFLHGGITHLLF
NMLALWMFGTPLESDWGTRQFLKYYFICGIGAGVCDVAMNAMMGNWVTSTIGASGAIYGLLLAYGVCYPDQTVLMGFLFP
IKAKYMVMIYAAIELYLSIGVNNGISNIAHLGGMVVGFVYLKSRLPRLKLRLPDWQGAYRQWKLQRAKKKFQVYMRKHGD
RGPWVN

Sequences:

>Translated_246_residues
MRQPRYTYRRSSFFGSFPPGVKWLLIVNTVVFLITSLFARQFGDDFRLLALAPVAVVQHFAIWQLVTYLFLHGGITHLLF
NMLALWMFGTPLESDWGTRQFLKYYFICGIGAGVCDVAMNAMMGNWVTSTIGASGAIYGLLLAYGVCYPDQTVLMGFLFP
IKAKYMVMIYAAIELYLSIGVNNGISNIAHLGGMVVGFVYLKSRLPRLKLRLPDWQGAYRQWKLQRAKKKFQVYMRKHGD
RGPWVN
>Mature_246_residues
MRQPRYTYRRSSFFGSFPPGVKWLLIVNTVVFLITSLFARQFGDDFRLLALAPVAVVQHFAIWQLVTYLFLHGGITHLLF
NMLALWMFGTPLESDWGTRQFLKYYFICGIGAGVCDVAMNAMMGNWVTSTIGASGAIYGLLLAYGVCYPDQTVLMGFLFP
IKAKYMVMIYAAIELYLSIGVNNGISNIAHLGGMVVGFVYLKSRLPRLKLRLPDWQGAYRQWKLQRAKKKFQVYMRKHGD
RGPWVN

Specific function: Not Yet Known. [C]

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28051; Mature: 28051

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCC
>Mature Secondary Structure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CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA