| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621337
Identifier: 116621337
GI number: 116621337
Start: 2840685
End: 2841815
Strand: Direct
Name: 116621337
Synonym: Acid_2218
Alternate gene names: NA
Gene position: 2840685-2841815 (Clockwise)
Preceding gene: 116621336
Following gene: 116621338
Centisome position: 28.5
GC content: 57.21
Gene sequence:
>1131_bases ATGCGATCCATAAAAGTTCTCTTGCCTTCCGCTGCCATGTTTCTAGTGGTAGCGAACCTCGTGGTAGGTCAGACGCAGGG CCCGTTGAAGGACCCCGGCGCCACGGTGGCGAAGCCGCGCAAGAGCCCGGATTCCCCGACCAACGACGAGGAGCTGCCCA AGATTCCTTCCAAGCTCAAGAAGGATCCCAAGATGGAAAAGGGCGACATGACGCAGTTCCAGAGCAATGTGGACATCGTC ACGGTAGACGTCGCGGTGGTGGATAACAAGGGCCACTTCATTCCCGGGATTCCGGCGGGCAATTTCCGCATTCTGGAAGA CAACGTCCCGCAGCAGATTCGCAAAGTGGACATGGGCGAAGCGCCGATGACGATTGCGATGGTGATCGAGTTCAGCAATC TCTTCCAGAAGTATTGGAGCGCGGCCTGGTACCAGACGCTGCAATTGGCCTGGGGCTTTGCCGAGAGCCTGAAGCCCGAG GATTACGCGGCCGTGGTGGCGTACGATATCCGCCCCGAGATTCTAGCGGATTTCACGACCGATAAAATGAAAATCCGTGA GGGCCTGGACCGGCTCAAAATCGCCGCCTTCTCGGAAGCGAATATGTTCGACGCCGTTACCGACACCGCCGACCGGATGA GCGGCATCGAAGGGCGCAAGGCGATTCTGCTGATCACCAGCGGCATCGATACGTTCAGCAAGATCACCTACGATCAAACC CGTAAAAAATTGCAGGACTCCGGAGTACCGATCTACTCCATCGGCTTGATGCAGATGCAGCGCGATATGGCGGATGCCTA CATGGCGCCCACTGCCCGCATGGATTTTCTGCAAGCCGACAATGAATTGCGCACGTTCGCAAAAGAAACCGGCGGGGCCG CATACTTCCCGCGATTCCCGGGTGAATACCCAGGGATTTTCCAGATGCTGCACCAGGCACTCAGGAACCAGTACGTCATC ACGTACCAGCCCAGCAATACCAAACACGATGGCGCCTTTCGCAAGCTGAAGGTGGAACTGGTCAATCCGGCGACCAACGA GCCGCTTCCGGTGAAGGACGAAAAGGGCAAACCGGTCAAGTATCAGATCGTCTGCAAGACCGGATATAAAGCGCCGCGTG CGGTGGAGTAG
Upstream 100 bases:
>100_bases CCTGGGTCAACTGAGATCGGTCAACTGAAGCCCAGAGTTTACCCGAAACCCGCGGGCCACCCACCGCGTCGTTTGATATA GTTACGCTAGAAGTACGTCT
Downstream 100 bases:
>100_bases TACGCCGACATCATCAGGCGCCCTAGTACGATTGACCGCGTCACGCCGGTCAATTGTCAAGAACTGAATCTCGCTACTTT CCAAGGCGATGCAAATCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Von Willebrand Factor Type A Domain Protein
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MRSIKVLLPSAAMFLVVANLVVGQTQGPLKDPGATVAKPRKSPDSPTNDEELPKIPSKLKKDPKMEKGDMTQFQSNVDIV TVDVAVVDNKGHFIPGIPAGNFRILEDNVPQQIRKVDMGEAPMTIAMVIEFSNLFQKYWSAAWYQTLQLAWGFAESLKPE DYAAVVAYDIRPEILADFTTDKMKIREGLDRLKIAAFSEANMFDAVTDTADRMSGIEGRKAILLITSGIDTFSKITYDQT RKKLQDSGVPIYSIGLMQMQRDMADAYMAPTARMDFLQADNELRTFAKETGGAAYFPRFPGEYPGIFQMLHQALRNQYVI TYQPSNTKHDGAFRKLKVELVNPATNEPLPVKDEKGKPVKYQIVCKTGYKAPRAVE
Sequences:
>Translated_376_residues MRSIKVLLPSAAMFLVVANLVVGQTQGPLKDPGATVAKPRKSPDSPTNDEELPKIPSKLKKDPKMEKGDMTQFQSNVDIV TVDVAVVDNKGHFIPGIPAGNFRILEDNVPQQIRKVDMGEAPMTIAMVIEFSNLFQKYWSAAWYQTLQLAWGFAESLKPE DYAAVVAYDIRPEILADFTTDKMKIREGLDRLKIAAFSEANMFDAVTDTADRMSGIEGRKAILLITSGIDTFSKITYDQT RKKLQDSGVPIYSIGLMQMQRDMADAYMAPTARMDFLQADNELRTFAKETGGAAYFPRFPGEYPGIFQMLHQALRNQYVI TYQPSNTKHDGAFRKLKVELVNPATNEPLPVKDEKGKPVKYQIVCKTGYKAPRAVE >Mature_376_residues MRSIKVLLPSAAMFLVVANLVVGQTQGPLKDPGATVAKPRKSPDSPTNDEELPKIPSKLKKDPKMEKGDMTQFQSNVDIV TVDVAVVDNKGHFIPGIPAGNFRILEDNVPQQIRKVDMGEAPMTIAMVIEFSNLFQKYWSAAWYQTLQLAWGFAESLKPE DYAAVVAYDIRPEILADFTTDKMKIREGLDRLKIAAFSEANMFDAVTDTADRMSGIEGRKAILLITSGIDTFSKITYDQT RKKLQDSGVPIYSIGLMQMQRDMADAYMAPTARMDFLQADNELRTFAKETGGAAYFPRFPGEYPGIFQMLHQALRNQYVI TYQPSNTKHDGAFRKLKVELVNPATNEPLPVKDEKGKPVKYQIVCKTGYKAPRAVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42000; Mature: 42000
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSIKVLLPSAAMFLVVANLVVGQTQGPLKDPGATVAKPRKSPDSPTNDEELPKIPSKLK CCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH KDPKMEKGDMTQFQSNVDIVTVDVAVVDNKGHFIPGIPAGNFRILEDNVPQQIRKVDMGE CCCCCCCCCHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCC APMTIAMVIEFSNLFQKYWSAAWYQTLQLAWGFAESLKPEDYAAVVAYDIRPEILADFTT CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHCCH DKMKIREGLDRLKIAAFSEANMFDAVTDTADRMSGIEGRKAILLITSGIDTFSKITYDQT HHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHH RKKLQDSGVPIYSIGLMQMQRDMADAYMAPTARMDFLQADNELRTFAKETGGAAYFPRFP HHHHHHCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCEEECCCCC GEYPGIFQMLHQALRNQYVITYQPSNTKHDGAFRKLKVELVNPATNEPLPVKDEKGKPVK CCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEE YQIVCKTGYKAPRAVE EEEEEECCCCCCCCCC >Mature Secondary Structure MRSIKVLLPSAAMFLVVANLVVGQTQGPLKDPGATVAKPRKSPDSPTNDEELPKIPSKLK CCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH KDPKMEKGDMTQFQSNVDIVTVDVAVVDNKGHFIPGIPAGNFRILEDNVPQQIRKVDMGE CCCCCCCCCHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCC APMTIAMVIEFSNLFQKYWSAAWYQTLQLAWGFAESLKPEDYAAVVAYDIRPEILADFTT CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHCCH DKMKIREGLDRLKIAAFSEANMFDAVTDTADRMSGIEGRKAILLITSGIDTFSKITYDQT HHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHH RKKLQDSGVPIYSIGLMQMQRDMADAYMAPTARMDFLQADNELRTFAKETGGAAYFPRFP HHHHHHCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCEEECCCCC GEYPGIFQMLHQALRNQYVITYQPSNTKHDGAFRKLKVELVNPATNEPLPVKDEKGKPVK CCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEE YQIVCKTGYKAPRAVE EEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA