| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621293
Identifier: 116621293
GI number: 116621293
Start: 2784237
End: 2785406
Strand: Direct
Name: 116621293
Synonym: Acid_2174
Alternate gene names: NA
Gene position: 2784237-2785406 (Clockwise)
Preceding gene: 116621290
Following gene: 116621294
Centisome position: 27.94
GC content: 61.79
Gene sequence:
>1170_bases ATGCCTTCTATCTCCAAACGATTATTGACGTTTATCAGTCTGTTCGGTCTCGCCGCGGGATCGGCGCTAGCTCAGCCGGC CACCGCGACGGTTTTTGCCAGCGGCCTCTCCAATCCAGCCAAAATCATCACCGGGCCATCCGGTACCCTCCTGGTCGCCG AGACCGGGACCACTTCAAATTCCGGTCGCGTTTCCATCATCAGCGCCAGCGGCACGCGATCCACTCTGATCGACGGCCTT CCCTCCGGACTCTCCGTACCCAATGGCGATCCCGACGGCGTCAACGGTTTGCTCCTCGATGGCAACACCCTCTACATCGC AGTCGGTGAGGGCGATCTCTATGCCAACGGCACCGCGCAGGGAACCCTCGTCGTCAATCCCAATGCCGGCAAGATTTCGT CCCCGATCTTCGACAGTCTGCTGCAAGTCGATCTCTCCCAGGCCGCCGATAAAATCGCCTCTGGCTTCACCTTGCAAACC GCCGATCACACCACCTTGTTCCACGGCCAGCCCGTCTCGCTGACCAATACCTCGGGCGACAAGGCCACCGTCAGCATCCT TGCCCAGTTTCGCTTCCGGCCCGACCCTACCGAAATCATCAAGCACTCCCACCCCTACGGGATCACCAAAATCGACTCCG ATCCGGCCCACCTCTACGTGAACGACGCCGGACTTAACCTGGTGCACCAGGTCGATATCCCCTCCGGCCGCAAACGCACC CTCATTCAATTTCCCCAATTCTCCAACGTCGGCCCCACCGGGCCGCCCGTCGTCGATGCCGTGCCCACCAGCGTTCGCGC CTATGGCAATCAACTGCTCGTGAGCTTCCTGACCGGTTTCCCCTTCACCCCCGGCGATTCCAAGGTGTTGCAGATCGATC CCGCCACCGGAACCAGCGTCCCCTTCTTGAGCTGGCTTTCCTCGGCGACCGATATCGTCTACCGCACCCGCCCCAACGGT GCTCGCCCGCAGTTCTTTCTGCTGGAATACAGCACTGGCTTCCTCGCGGGAGCGCCTGGGCGCGTCCAGGTCTTCAACTC GCCCACCGGTGCCGTCCTGGTCGATGGCCTCCACGGCCCTACCAGCCTCGCGCTCAACAACACCGCCGGCACCCTCTACA TCGCCAGCCGTACCGACGGAAAAATCCTCCAGGTAGACGTCGGCCAGTAA
Upstream 100 bases:
>100_bases TCCGTGTCCCCCGCGCTAACGAACGCTGCGATACACAATGGCCCAAAGATACGGACATAACTGTTACGCAAAGCCCACTT TGCCATGATATAGTTCGCCG
Downstream 100 bases:
>100_bases CCGCCGACCGCCCACGCGATATCATGCTTGCATGACTCGCGGCTTTATTGCTTGGATCGCGCTTTGCGCCGGCGTCTTGA ACGCACAGGAGGTGAAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MPSISKRLLTFISLFGLAAGSALAQPATATVFASGLSNPAKIITGPSGTLLVAETGTTSNSGRVSIISASGTRSTLIDGL PSGLSVPNGDPDGVNGLLLDGNTLYIAVGEGDLYANGTAQGTLVVNPNAGKISSPIFDSLLQVDLSQAADKIASGFTLQT ADHTTLFHGQPVSLTNTSGDKATVSILAQFRFRPDPTEIIKHSHPYGITKIDSDPAHLYVNDAGLNLVHQVDIPSGRKRT LIQFPQFSNVGPTGPPVVDAVPTSVRAYGNQLLVSFLTGFPFTPGDSKVLQIDPATGTSVPFLSWLSSATDIVYRTRPNG ARPQFFLLEYSTGFLAGAPGRVQVFNSPTGAVLVDGLHGPTSLALNNTAGTLYIASRTDGKILQVDVGQ
Sequences:
>Translated_389_residues MPSISKRLLTFISLFGLAAGSALAQPATATVFASGLSNPAKIITGPSGTLLVAETGTTSNSGRVSIISASGTRSTLIDGL PSGLSVPNGDPDGVNGLLLDGNTLYIAVGEGDLYANGTAQGTLVVNPNAGKISSPIFDSLLQVDLSQAADKIASGFTLQT ADHTTLFHGQPVSLTNTSGDKATVSILAQFRFRPDPTEIIKHSHPYGITKIDSDPAHLYVNDAGLNLVHQVDIPSGRKRT LIQFPQFSNVGPTGPPVVDAVPTSVRAYGNQLLVSFLTGFPFTPGDSKVLQIDPATGTSVPFLSWLSSATDIVYRTRPNG ARPQFFLLEYSTGFLAGAPGRVQVFNSPTGAVLVDGLHGPTSLALNNTAGTLYIASRTDGKILQVDVGQ >Mature_388_residues PSISKRLLTFISLFGLAAGSALAQPATATVFASGLSNPAKIITGPSGTLLVAETGTTSNSGRVSIISASGTRSTLIDGLP SGLSVPNGDPDGVNGLLLDGNTLYIAVGEGDLYANGTAQGTLVVNPNAGKISSPIFDSLLQVDLSQAADKIASGFTLQTA DHTTLFHGQPVSLTNTSGDKATVSILAQFRFRPDPTEIIKHSHPYGITKIDSDPAHLYVNDAGLNLVHQVDIPSGRKRTL IQFPQFSNVGPTGPPVVDAVPTSVRAYGNQLLVSFLTGFPFTPGDSKVLQIDPATGTSVPFLSWLSSATDIVYRTRPNGA RPQFFLLEYSTGFLAGAPGRVQVFNSPTGAVLVDGLHGPTSLALNNTAGTLYIASRTDGKILQVDVGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40382; Mature: 40251
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSISKRLLTFISLFGLAAGSALAQPATATVFASGLSNPAKIITGPSGTLLVAETGTTSN CCCHHHHHHHHHHHHHHHCCCHHCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCC SGRVSIISASGTRSTLIDGLPSGLSVPNGDPDGVNGLLLDGNTLYIAVGEGDLYANGTAQ CCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCEEECCCCC GTLVVNPNAGKISSPIFDSLLQVDLSQAADKIASGFTLQTADHTTLFHGQPVSLTNTSGD EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCCEEEECCCCC KATVSILAQFRFRPDPTEIIKHSHPYGITKIDSDPAHLYVNDAGLNLVHQVDIPSGRKRT HHEEEEEEEECCCCCHHHHHCCCCCCCEEEECCCCCEEEEECCCCEEEEEECCCCCCCCE LIQFPQFSNVGPTGPPVVDAVPTSVRAYGNQLLVSFLTGFPFTPGDSKVLQIDPATGTSV EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC PFLSWLSSATDIVYRTRPNGARPQFFLLEYSTGFLAGAPGRVQVFNSPTGAVLVDGLHGP HHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCEEECCCCEEEEEECCCCEEEEECCCCC TSLALNNTAGTLYIASRTDGKILQVDVGQ CEEEEECCCEEEEEEECCCCEEEEEECCC >Mature Secondary Structure PSISKRLLTFISLFGLAAGSALAQPATATVFASGLSNPAKIITGPSGTLLVAETGTTSN CCHHHHHHHHHHHHHHHCCCHHCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCC SGRVSIISASGTRSTLIDGLPSGLSVPNGDPDGVNGLLLDGNTLYIAVGEGDLYANGTAQ CCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCEEECCCCC GTLVVNPNAGKISSPIFDSLLQVDLSQAADKIASGFTLQTADHTTLFHGQPVSLTNTSGD EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCCEEEECCCCC KATVSILAQFRFRPDPTEIIKHSHPYGITKIDSDPAHLYVNDAGLNLVHQVDIPSGRKRT HHEEEEEEEECCCCCHHHHHCCCCCCCEEEECCCCCEEEEECCCCEEEEEECCCCCCCCE LIQFPQFSNVGPTGPPVVDAVPTSVRAYGNQLLVSFLTGFPFTPGDSKVLQIDPATGTSV EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC PFLSWLSSATDIVYRTRPNGARPQFFLLEYSTGFLAGAPGRVQVFNSPTGAVLVDGLHGP HHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCEEECCCCEEEEEECCCCEEEEECCCCC TSLALNNTAGTLYIASRTDGKILQVDVGQ CEEEEECCCEEEEEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA