Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116621290

Identifier: 116621290

GI number: 116621290

Start: 2780486

End: 2781085

Strand: Direct

Name: 116621290

Synonym: Acid_2171

Alternate gene names: NA

Gene position: 2780486-2781085 (Clockwise)

Preceding gene: 116621288

Following gene: 116621293

Centisome position: 27.9

GC content: 60.17

Gene sequence:

>600_bases
GTGAGCTCTCCTGCCTACACCGGAACTTCACCAGGCGCGTCAGGGCGTCGGCCGTCCGGCGCTCACTCATTACTACCACA
GGCGTACCCGCTGGGCAAGGAACACGAGCCGCCTCAGCGCCCCCCTACAGCGGAAGCGCCGTTCACGCTCGGGCACGCGG
GCACTGACCTCGTCGCCGGCCCTCCCGCGGACCTCCCTGTACACGATATATCGCCTCGGGCGCTCGGGACCGTGGTCGCG
GAGGATGAACATCAGCATCAATGCAACCAGTGCCGTCGATACCAGGACTACTTGTGGGAATGGAGATTGGGCAGCCAGCC
GGATCATCGTTTGATCCACGTACTCCGCAACCGCGGTCCGGTTGCCGGGTACCGACATCGTGATCGTCAACAGGAACAGG
ACCGCGCCTTTCATGCCTCTCTGAGGCTAAGCCGCCCGCCGCGCCATTACAAGGCTGTAAACAGAACAGCTCGGAACACT
AACTTCGGTTCACTCCCCAACACTCGATGGCCGCCATTGTGCTACTTCAGGTATGAACTCAAAAACTTTTGTCGATCTTA
TGCAGCGGTCCCAAGGTCGAGGAATAGCTTTCTCATCTGA

Upstream 100 bases:

>100_bases
GATCGTGCCGAGGCCCTGAGCTAGGACAAAGCTCGGAGCCAGCAGGAGTGCCGCGAGAAATAATCCGGCGAGTGAAGTTC
GGTGAACAAACGAGCGCATC

Downstream 100 bases:

>100_bases
CTCCGAAGTGCCGCGTAGTGGGCGTCAATAGGCGCGGTTTGAGTGGGCCGGCGTCCTGGTTTGAGCCGGCCCTGGGCTGC
CAGCAAGGGCTTGATCACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MSSPAYTGTSPGASGRRPSGAHSLLPQAYPLGKEHEPPQRPPTAEAPFTLGHAGTDLVAGPPADLPVHDISPRALGTVVA
EDEHQHQCNQCRRYQDYLWEWRLGSQPDHRLIHVLRNRGPVAGYRHRDRQQEQDRAFHASLRLSRPPRHYKAVNRTARNT
NFGSLPNTRWPPLCYFRYELKNFCRSYAAVPRSRNSFLI

Sequences:

>Translated_199_residues
MSSPAYTGTSPGASGRRPSGAHSLLPQAYPLGKEHEPPQRPPTAEAPFTLGHAGTDLVAGPPADLPVHDISPRALGTVVA
EDEHQHQCNQCRRYQDYLWEWRLGSQPDHRLIHVLRNRGPVAGYRHRDRQQEQDRAFHASLRLSRPPRHYKAVNRTARNT
NFGSLPNTRWPPLCYFRYELKNFCRSYAAVPRSRNSFLI
>Mature_198_residues
SSPAYTGTSPGASGRRPSGAHSLLPQAYPLGKEHEPPQRPPTAEAPFTLGHAGTDLVAGPPADLPVHDISPRALGTVVAE
DEHQHQCNQCRRYQDYLWEWRLGSQPDHRLIHVLRNRGPVAGYRHRDRQQEQDRAFHASLRLSRPPRHYKAVNRTARNTN
FGSLPNTRWPPLCYFRYELKNFCRSYAAVPRSRNSFLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22605; Mature: 22473

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPAYTGTSPGASGRRPSGAHSLLPQAYPLGKEHEPPQRPPTAEAPFTLGHAGTDLVAG
CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
PPADLPVHDISPRALGTVVAEDEHQHQCNQCRRYQDYLWEWRLGSQPDHRLIHVLRNRGP
CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
VAGYRHRDRQQEQDRAFHASLRLSRPPRHYKAVNRTARNTNFGSLPNTRWPPLCYFRYEL
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHH
KNFCRSYAAVPRSRNSFLI
HHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SSPAYTGTSPGASGRRPSGAHSLLPQAYPLGKEHEPPQRPPTAEAPFTLGHAGTDLVAG
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
PPADLPVHDISPRALGTVVAEDEHQHQCNQCRRYQDYLWEWRLGSQPDHRLIHVLRNRGP
CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
VAGYRHRDRQQEQDRAFHASLRLSRPPRHYKAVNRTARNTNFGSLPNTRWPPLCYFRYEL
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHH
KNFCRSYAAVPRSRNSFLI
HHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA