| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is fabL [H]
Identifier: 116621275
GI number: 116621275
Start: 2758735
End: 2759520
Strand: Reverse
Name: fabL [H]
Synonym: Acid_2156
Alternate gene names: 116621275
Gene position: 2759520-2758735 (Counterclockwise)
Preceding gene: 116621276
Following gene: 116621274
Centisome position: 27.69
GC content: 63.23
Gene sequence:
>786_bases ATGAGCAAACAACCGTGGGCACTGATATTGGGCGCGAGCAGCGGGTTCGGCGAAGCCACCGCGATTGAGCTGGCGCGCGC CGGGATGAATATCTTCGGCGTCCACATGGATCGGCGCGACAAGGTGCCTCATGTGGCCGAGGTGCAGGAGCGCATCCGCG CGGCGGGGCGCGAGTGTGAATTCTTCAACATGAACGCGGCCGATGAAGAGAAGCGCAAGGAGTGCGTCGAGCAGATCCGG CAGCGGGTCACCGATTCAACGGGCACGCTGCGGGTGCTGCTTCACTCGCTCGCCTGGGGCTCGCTCAAACCGCTGGCCGG CGCCGAAATTGTCGCCAATAAGAAGCAGATCGAATCTACCGCCGATATCATGGGCCACTCGTTGGTCTACTGGGTGCAGG AGTGTCTGCTCGCGGGGTTGTTCGACAAAGGGGCGCGCATCTTCGCCATGACCAGCTCAGGCAGCACGCGCGCGATTCCT GAGTACGGACCGGTGAGCGCCGCCAAGGCCATCCTCGAAGCTCACATCCGGCAGCTCGCGCTCGAGCTCGCGCCCGCCGG AATCACCGCCAACGCGATTCTCGCCGGCGTCACCGATACGCCGGCGCTGCGCCTGATTCCGGGACACGAGAAGATTATGG AGATCGCGCGCACGCGCAATCCCAACCGGCGCCTGACTACGCCTGAAGACGTGGCGCGCTCGATCGCCGTGCTCTGCCAT CCTGCCACGTATTGGATGACAGGCAACACCATCCATGTTGATGGCGGTGAGAACATTGTAGGATGA
Upstream 100 bases:
>100_bases TCGGTTTGAGGGCGATGCCGAAGATGAAGGGCACATTGCTTCGGAGAGATCTTCGCGGCCTGCGAGCAAACAAGAGCTGT GTAATACGAGAGGAATTCCG
Downstream 100 bases:
>100_bases AGCTGATGGACGATAATGGTCTTCCCTGCCTCGACCTGCTCGAATCGACGCCCGGCATCCTCCGCGGGCTCATGGCCGAA CTCACCGAAGAGGATGTCCG
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: Enoyl-acyl carrier protein reductase III; NADPH-dependent enoyl-ACP reductase [H]
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSKQPWALILGASSGFGEATAIELARAGMNIFGVHMDRRDKVPHVAEVQERIRAAGRECEFFNMNAADEEKRKECVEQIR QRVTDSTGTLRVLLHSLAWGSLKPLAGAEIVANKKQIESTADIMGHSLVYWVQECLLAGLFDKGARIFAMTSSGSTRAIP EYGPVSAAKAILEAHIRQLALELAPAGITANAILAGVTDTPALRLIPGHEKIMEIARTRNPNRRLTTPEDVARSIAVLCH PATYWMTGNTIHVDGGENIVG
Sequences:
>Translated_261_residues MSKQPWALILGASSGFGEATAIELARAGMNIFGVHMDRRDKVPHVAEVQERIRAAGRECEFFNMNAADEEKRKECVEQIR QRVTDSTGTLRVLLHSLAWGSLKPLAGAEIVANKKQIESTADIMGHSLVYWVQECLLAGLFDKGARIFAMTSSGSTRAIP EYGPVSAAKAILEAHIRQLALELAPAGITANAILAGVTDTPALRLIPGHEKIMEIARTRNPNRRLTTPEDVARSIAVLCH PATYWMTGNTIHVDGGENIVG >Mature_260_residues SKQPWALILGASSGFGEATAIELARAGMNIFGVHMDRRDKVPHVAEVQERIRAAGRECEFFNMNAADEEKRKECVEQIRQ RVTDSTGTLRVLLHSLAWGSLKPLAGAEIVANKKQIESTADIMGHSLVYWVQECLLAGLFDKGARIFAMTSSGSTRAIPE YGPVSAAKAILEAHIRQLALELAPAGITANAILAGVTDTPALRLIPGHEKIMEIARTRNPNRRLTTPEDVARSIAVLCHP ATYWMTGNTIHVDGGENIVG
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Escherichia coli, GI1787545, Length=168, Percent_Identity=32.1428571428571, Blast_Score=86, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6324126, Length=115, Percent_Identity=36.5217391304348, Blast_Score=66, Evalue=7e-12,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.10 [H]
Molecular weight: Translated: 28329; Mature: 28198
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQPWALILGASSGFGEATAIELARAGMNIFGVHMDRRDKVPHVAEVQERIRAAGRECE CCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCE FFNMNAADEEKRKECVEQIRQRVTDSTGTLRVLLHSLAWGSLKPLAGAEIVANKKQIEST EEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH ADIMGHSLVYWVQECLLAGLFDKGARIFAMTSSGSTRAIPEYGPVSAAKAILEAHIRQLA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH LELAPAGITANAILAGVTDTPALRLIPGHEKIMEIARTRNPNRRLTTPEDVARSIAVLCH HHHCCCCCCHHHEEECCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC PATYWMTGNTIHVDGGENIVG CCEEEEECCEEEECCCCCCCC >Mature Secondary Structure SKQPWALILGASSGFGEATAIELARAGMNIFGVHMDRRDKVPHVAEVQERIRAAGRECE CCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCE FFNMNAADEEKRKECVEQIRQRVTDSTGTLRVLLHSLAWGSLKPLAGAEIVANKKQIEST EEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH ADIMGHSLVYWVQECLLAGLFDKGARIFAMTSSGSTRAIPEYGPVSAAKAILEAHIRQLA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH LELAPAGITANAILAGVTDTPALRLIPGHEKIMEIARTRNPNRRLTTPEDVARSIAVLCH HHHCCCCCCHHHEEECCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC PATYWMTGNTIHVDGGENIVG CCEEEEECCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8946165; 9202460; 9384377 [H]