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The map label for this gene is ydiB [H]

Identifier: 116621276

GI number: 116621276

Start: 2759858

End: 2760274

Strand: Reverse

Name: ydiB [H]

Synonym: Acid_2157

Alternate gene names: 116621276

Gene position: 2760274-2759858 (Counterclockwise)

Preceding gene: 116621277

Following gene: 116621275

Centisome position: 27.7

GC content: 64.27

Gene sequence:

>417_bases
GTGCCCACGTACCGGACGGCTTCTGAACAGGAGACGATTGCGCTGGGAGAGCAGTTGGCGAGCACGCTGCCGCGCAAGGG
CGTGGTGCTTCTGATCGGCAACCTGGGCGCGGGCAAGACCACGCTCGCCAAGGGAATCGCGCACGGGCGAGGCGCCGCCG
AGACCGACGATGTGTCGAGCCCGACGTTCACACTGATCCACGAGTACGGGGCGGGTGTCTATCATATTGATCTTTACCGG
CTCGATGAACCGCGACAGGTGGCCACACTCGGCCTCGACGAACTATTCGACCGCGAGGCGCTGGTGCTGATCGAATGGGG
CGAGCGCTTCCCCGCCATGATGCCCGCGCACCGCACCGAGATTTATCTGCGTGCCGTGGGCGACGAGGCGCGTGAGATTG
AGGTGAGGGAAGTATGA

Upstream 100 bases:

>100_bases
CTGCACGGCCGGGCCGGGGAGATCGGCGCCGAAGCGCTCGGCGAGAAGTGCCTCGTCGCCACCGACATCCTGCAGTACCT
GCCCGACGCCATGGAGGAAA

Downstream 100 bases:

>100_bases
TGGGCGCGAGTGCCAAGCCAAGCGGATCTCCGTCGAAAATCGACCTTCTCCGCTCGTCGATACACCTCCACGGTCAGGAA
GCTCGGATGGAGGCATTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MPTYRTASEQETIALGEQLASTLPRKGVVLLIGNLGAGKTTLAKGIAHGRGAAETDDVSSPTFTLIHEYGAGVYHIDLYR
LDEPRQVATLGLDELFDREALVLIEWGERFPAMMPAHRTEIYLRAVGDEAREIEVREV

Sequences:

>Translated_138_residues
MPTYRTASEQETIALGEQLASTLPRKGVVLLIGNLGAGKTTLAKGIAHGRGAAETDDVSSPTFTLIHEYGAGVYHIDLYR
LDEPRQVATLGLDELFDREALVLIEWGERFPAMMPAHRTEIYLRAVGDEAREIEVREV
>Mature_137_residues
PTYRTASEQETIALGEQLASTLPRKGVVLLIGNLGAGKTTLAKGIAHGRGAAETDDVSSPTFTLIHEYGAGVYHIDLYRL
DEPRQVATLGLDELFDREALVLIEWGERFPAMMPAHRTEIYLRAVGDEAREIEVREV

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=129, Percent_Identity=37.984496124031, Blast_Score=87, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 15206; Mature: 15075

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTYRTASEQETIALGEQLASTLPRKGVVLLIGNLGAGKTTLAKGIAHGRGAAETDDVSS
CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCC
PTFTLIHEYGAGVYHIDLYRLDEPRQVATLGLDELFDREALVLIEWGERFPAMMPAHRTE
CCEEEEECCCCCEEEEEEEECCCCCHHHHCCHHHHHCCCEEEEEECCCCCCCCCCCCCCE
IYLRAVGDEAREIEVREV
EEEEECCCCCCEEEEECC
>Mature Secondary Structure 
PTYRTASEQETIALGEQLASTLPRKGVVLLIGNLGAGKTTLAKGIAHGRGAAETDDVSS
CCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCC
PTFTLIHEYGAGVYHIDLYRLDEPRQVATLGLDELFDREALVLIEWGERFPAMMPAHRTE
CCEEEEECCCCCEEEEEEEECCCCCHHHHCCHHHHHCCCEEEEEECCCCCCCCCCCCCCE
IYLRAVGDEAREIEVREV
EEEEECCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]