| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116621214
Identifier: 116621214
GI number: 116621214
Start: 2672859
End: 2674601
Strand: Reverse
Name: 116621214
Synonym: Acid_2095
Alternate gene names: NA
Gene position: 2674601-2672859 (Counterclockwise)
Preceding gene: 116621215
Following gene: 116621213
Centisome position: 26.84
GC content: 61.27
Gene sequence:
>1743_bases ATGAAGCCTCGAGCACACGCGAACCGGCTGGTCGCCGCCGCGGCCCTCCTCATTGTTGCCATGTGCGTCCAGGCGCAGCG GCAAAGCGCCACTCCCGATGCGGCCATTCCCCAACTGGTGGACATCACACCCTCTACCAGGATCCAGTTTAAGCACCTCG CCTCTCCCGACAAAAAGTACATCGTCGAATCTATGAGCGGCGGTGTTGCCCTGATCGATTACGACCGCGACGGATGGCCG GACATCTACTTCACCAACGCGCAAGACGTCGAGATGCAACTGGCCGGCAAAAAGGCCCGCAGCGTCCTTTTCCACAACAA CCGGGACGGCACGTTTACCGATGTCTCCGCCAGTGCGAATGTAGAGTACCCCTGCTGGGCCAACGGCGCCGTCGTCGGCG ACTACAACAACGATGGCTGGCCGGATCTGCTCGTCACCTGTTTCGGCGGTGTGGTCCTGTACCGCAACAATTCCGATGGC ACTTTCGCCAATGTGACCCGCCAAGCCGGCCTCGGCGGCGACAATCTCTGGGCCATGGGCGCGGCCTTCGGAGATTACGA TGGCGATGGGCTGCAGGATCTTTTCATTTCCCACTACGCCGCGCTTGATCTACATGATCTGCCTGCGTTTGGCTCCACGA TCAACTGCCAGTACTTCAACATCAAGGTCCAATGCGGCCCCGCCGGGCTAAAGGGCTCGCCCGACAATCTCTATCACAAC AACGGCAACGGCACATTCACGGACGTCTCGAAGACGGCCGGCGTCGATGATCCCGCGGGTCTGCTCGGTCTCACCGCCGT CTGGTCAGACCTCGATGGCGACGGCAGGCTCGAGCTCTTCGTCGCCAACGATGGGGCGCAGAACTATCTTTACCGATATG ACGGCAAGGGCCGCTTCACCGAAATCGGACTACAAGCCGGAGTGGGCCTGGATGAAAACGGCAAGGCCCTCGCCAATATG GGTGTGGCGCTGGGAGACTACCTGCACACCGGGCGGTTTGGGATCGCGATCACTCATTTCAGCGATCAGTACCTGGAACT CTTCCGCAACGATGGCGCGCTGAACTTCACCGACGTTTCCAATATTTCCAGGCTCGCTCGCGCCACGACCCACGTAGTCG GCTGGGGCGATGCGTTCTACGATCCGGATAATGATGGCTGGCTCGACCTGATCGCGGTCAACGGTCACGTATATCCCCAG GTCGATGGCGCGGACATCGGGGTCAAATACCGCCAACCGGGCCAACTATTTCTCAACCAGCGTGACGGAACATTCCGCGA CGTGAGCGACCGGGCCGGGCCCGCGCTGAAGGTCCCGCGCGTTGGGCGCGGTCTGGCGATCGGGGACCTCTTCAACGACG GTCACCCGGAGGTAGTAGTTGAGAACCTGGAGGGAGAGCCGCTCGTTCTTCGAGCCGAGGGTGGACCCGGCAATCACTGG ATCAGCTTCGAACTCGCCGGCACGAAAAGCAATCGGCAGGCTCTGAACGCTCGCCTGAAAGTCACCGCCGGAGATCTTGT GCAACTCGATGAACTCCGGAGCGGCGGCAGCTACCTCTCTCAAAACGACCTGCGCATCCACTTCGGCCTGGGCGATCGGC GGCAGGCCGATAGCGTCCAGGTCACCTGGCCTTCCGGTGGTACCGAGACGCTCGCAAAGCTCGACGCCGATCGTTTTTAC TGTGTGAAGGAGGGCGCGGGAGTGGTTCCGTGCTCCAACATCCGGCCGGCTCCGCGGAAATAG
Upstream 100 bases:
>100_bases CCGACGCGGAGCGCGAAATGGAGAGCTTCCGCCACTACCAGGACCTGAAAGATCAGCTCGGCAAGGTGTTCAAACAACTC GCCGCGCCCGGCAATCCCAA
Downstream 100 bases:
>100_bases ACTCCCACGCGAACCGCGGGTGTAGAATCGATGCTTCCAAGGAGGAGACGTGCGAGTAACCCTCTTCGCCGCGATGCTCG CGACAGGCTTACTAGCGCCG
Product: ASPIC/UnbV domain-containing protein
Products: NA
Alternate protein names: FG-GAP Repeat Domain Protein; ASPIC/UnbV Domain Protein; FG-GAP Repeat-Containing Protein; ASPIC/UnbV; FG-GAP Repeat Protein; TPR Repeat-Containing Protein; PpiC-Type Peptidyl-Prolyl Cis-Trans Isomerase; Aspic/Unbv; Aspic/Unbv Domain Protein; FG-GAP Repeat- ASPIC/UnbV Domain-Containing Protein; Integrin-Like Protein; Protein Containing FG-GAP Repeats; Secreted Protein Containing FG-GAP Repeats; Fg-Gap Repeat Protein; ASPIC And UnbV Domain Protein; Rhs Family Protein; FG-GAP Repeat Domain-Containing Protein; RTX Family Protein Exoprotein; Protein Tyrosine Kinase Family; FG-GAP Repeat Protein/ASPIC/UnbV Domain Protein; Acid Secreted Protein ASPIC
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MKPRAHANRLVAAAALLIVAMCVQAQRQSATPDAAIPQLVDITPSTRIQFKHLASPDKKYIVESMSGGVALIDYDRDGWP DIYFTNAQDVEMQLAGKKARSVLFHNNRDGTFTDVSASANVEYPCWANGAVVGDYNNDGWPDLLVTCFGGVVLYRNNSDG TFANVTRQAGLGGDNLWAMGAAFGDYDGDGLQDLFISHYAALDLHDLPAFGSTINCQYFNIKVQCGPAGLKGSPDNLYHN NGNGTFTDVSKTAGVDDPAGLLGLTAVWSDLDGDGRLELFVANDGAQNYLYRYDGKGRFTEIGLQAGVGLDENGKALANM GVALGDYLHTGRFGIAITHFSDQYLELFRNDGALNFTDVSNISRLARATTHVVGWGDAFYDPDNDGWLDLIAVNGHVYPQ VDGADIGVKYRQPGQLFLNQRDGTFRDVSDRAGPALKVPRVGRGLAIGDLFNDGHPEVVVENLEGEPLVLRAEGGPGNHW ISFELAGTKSNRQALNARLKVTAGDLVQLDELRSGGSYLSQNDLRIHFGLGDRRQADSVQVTWPSGGTETLAKLDADRFY CVKEGAGVVPCSNIRPAPRK
Sequences:
>Translated_580_residues MKPRAHANRLVAAAALLIVAMCVQAQRQSATPDAAIPQLVDITPSTRIQFKHLASPDKKYIVESMSGGVALIDYDRDGWP DIYFTNAQDVEMQLAGKKARSVLFHNNRDGTFTDVSASANVEYPCWANGAVVGDYNNDGWPDLLVTCFGGVVLYRNNSDG TFANVTRQAGLGGDNLWAMGAAFGDYDGDGLQDLFISHYAALDLHDLPAFGSTINCQYFNIKVQCGPAGLKGSPDNLYHN NGNGTFTDVSKTAGVDDPAGLLGLTAVWSDLDGDGRLELFVANDGAQNYLYRYDGKGRFTEIGLQAGVGLDENGKALANM GVALGDYLHTGRFGIAITHFSDQYLELFRNDGALNFTDVSNISRLARATTHVVGWGDAFYDPDNDGWLDLIAVNGHVYPQ VDGADIGVKYRQPGQLFLNQRDGTFRDVSDRAGPALKVPRVGRGLAIGDLFNDGHPEVVVENLEGEPLVLRAEGGPGNHW ISFELAGTKSNRQALNARLKVTAGDLVQLDELRSGGSYLSQNDLRIHFGLGDRRQADSVQVTWPSGGTETLAKLDADRFY CVKEGAGVVPCSNIRPAPRK >Mature_580_residues MKPRAHANRLVAAAALLIVAMCVQAQRQSATPDAAIPQLVDITPSTRIQFKHLASPDKKYIVESMSGGVALIDYDRDGWP DIYFTNAQDVEMQLAGKKARSVLFHNNRDGTFTDVSASANVEYPCWANGAVVGDYNNDGWPDLLVTCFGGVVLYRNNSDG TFANVTRQAGLGGDNLWAMGAAFGDYDGDGLQDLFISHYAALDLHDLPAFGSTINCQYFNIKVQCGPAGLKGSPDNLYHN NGNGTFTDVSKTAGVDDPAGLLGLTAVWSDLDGDGRLELFVANDGAQNYLYRYDGKGRFTEIGLQAGVGLDENGKALANM GVALGDYLHTGRFGIAITHFSDQYLELFRNDGALNFTDVSNISRLARATTHVVGWGDAFYDPDNDGWLDLIAVNGHVYPQ VDGADIGVKYRQPGQLFLNQRDGTFRDVSDRAGPALKVPRVGRGLAIGDLFNDGHPEVVVENLEGEPLVLRAEGGPGNHW ISFELAGTKSNRQALNARLKVTAGDLVQLDELRSGGSYLSQNDLRIHFGLGDRRQADSVQVTWPSGGTETLAKLDADRFY CVKEGAGVVPCSNIRPAPRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62609; Mature: 62609
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPRAHANRLVAAAALLIVAMCVQAQRQSATPDAAIPQLVDITPSTRIQFKHLASPDKKY CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEECCCCCHHH IVESMSGGVALIDYDRDGWPDIYFTNAQDVEMQLAGKKARSVLFHNNRDGTFTDVSASAN HHHHCCCCEEEEEECCCCCCCEEECCCCCEEEEECCCCCCEEEEECCCCCCEEEECCCCC VEYPCWANGAVVGDYNNDGWPDLLVTCFGGVVLYRNNSDGTFANVTRQAGLGGDNLWAMG CCCCCCCCCEEEECCCCCCCHHHHHHHHCCEEEEEECCCCCEEEEHHHCCCCCCCEEEEE AAFGDYDGDGLQDLFISHYAALDLHDLPAFGSTINCQYFNIKVQCGPAGLKGSPDNLYHN CCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCEEE NGNGTFTDVSKTAGVDDPAGLLGLTAVWSDLDGDGRLELFVANDGAQNYLYRYDGKGRFT CCCCEEEECHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEECCCCCEE EIGLQAGVGLDENGKALANMGVALGDYLHTGRFGIAITHFSDQYLELFRNDGALNFTDVS EEEHHCCCCCCCCCCHHHHCCHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCEEECCHH NISRLARATTHVVGWGDAFYDPDNDGWLDLIAVNGHVYPQVDGADIGVKYRQPGQLFLNQ HHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEECCEEEECCCCCCEEEEECCCCEEEEEC RDGTFRDVSDRAGPALKVPRVGRGLAIGDLFNDGHPEVVVENLEGEPLVLRAEGGPGNHW CCCCCCCCHHCCCCEEECCCCCCCEEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCEE ISFELAGTKSNRQALNARLKVTAGDLVQLDELRSGGSYLSQNDLRIHFGLGDRRQADSVQ EEEEEECCCCCCHHCCEEEEEECCCEEEHHHHCCCCCCCCCCCCEEEECCCCCCCCCEEE VTWPSGGTETLAKLDADRFYCVKEGAGVVPCSNIRPAPRK EEECCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MKPRAHANRLVAAAALLIVAMCVQAQRQSATPDAAIPQLVDITPSTRIQFKHLASPDKKY CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEECCCCCHHH IVESMSGGVALIDYDRDGWPDIYFTNAQDVEMQLAGKKARSVLFHNNRDGTFTDVSASAN HHHHCCCCEEEEEECCCCCCCEEECCCCCEEEEECCCCCCEEEEECCCCCCEEEECCCCC VEYPCWANGAVVGDYNNDGWPDLLVTCFGGVVLYRNNSDGTFANVTRQAGLGGDNLWAMG CCCCCCCCCEEEECCCCCCCHHHHHHHHCCEEEEEECCCCCEEEEHHHCCCCCCCEEEEE AAFGDYDGDGLQDLFISHYAALDLHDLPAFGSTINCQYFNIKVQCGPAGLKGSPDNLYHN CCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCEEE NGNGTFTDVSKTAGVDDPAGLLGLTAVWSDLDGDGRLELFVANDGAQNYLYRYDGKGRFT CCCCEEEECHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEECCCCCEE EIGLQAGVGLDENGKALANMGVALGDYLHTGRFGIAITHFSDQYLELFRNDGALNFTDVS EEEHHCCCCCCCCCCHHHHCCHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCEEECCHH NISRLARATTHVVGWGDAFYDPDNDGWLDLIAVNGHVYPQVDGADIGVKYRQPGQLFLNQ HHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEECCEEEECCCCCCEEEEECCCCEEEEEC RDGTFRDVSDRAGPALKVPRVGRGLAIGDLFNDGHPEVVVENLEGEPLVLRAEGGPGNHW CCCCCCCCHHCCCCEEECCCCCCCEEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCEE ISFELAGTKSNRQALNARLKVTAGDLVQLDELRSGGSYLSQNDLRIHFGLGDRRQADSVQ EEEEEECCCCCCHHCCEEEEEECCCEEEHHHHCCCCCCCCCCCCEEEECCCCCCCCCEEE VTWPSGGTETLAKLDADRFYCVKEGAGVVPCSNIRPAPRK EEECCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA