Click here to switch to the map view.

The map label for this gene is 116621181

Identifier: 116621181

GI number: 116621181

Start: 2619436

End: 2619684

Strand: Reverse

Name: 116621181

Synonym: Acid_2062

Alternate gene names: NA

Gene position: 2619684-2619436 (Counterclockwise)

Preceding gene: 116621182

Following gene: 116621180

Centisome position: 26.29

GC content: 58.23

Gene sequence:

>249_bases
TTGAAGTACACGACCAGAGACATCGGGCAACTGATAAGGGAGACGCGCAAGAAACTGGGCATCACCCAGAAAACGCTGGC
TCTCACGTCCGGAACAGGCCTGCGGTTCATTATCGAGCTGGAGAAGGGGAAAGAAACCTGTGAAGTCGGCAAGGTGCTGA
CCGTTCTCCACACGCTCGGCATCAAGATGACGCTCACGCCACCCGCAGCGACCGCGCAGGAAGGATCAGGCGATGGCCCG
CATGCTTGA

Upstream 100 bases:

>100_bases
AGATAGGTGAAACATTCCCGTCAAGGAACATCTCTGGCTTCCTGCGGGCCGAACAGCTATAATATTCCCGTACGGTAACC
TTTCAACTGGAGCACGCTCC

Downstream 100 bases:

>100_bases
CGTCTACCTGCACACCGACCTCGCCGGGCATCTTACTCAGGACGATGACGGCGACATGAGCTTTCAGTACGCCGAAAGCT
GGCTGCACAAGCCAGGCGCC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MKYTTRDIGQLIRETRKKLGITQKTLALTSGTGLRFIIELEKGKETCEVGKVLTVLHTLGIKMTLTPPAATAQEGSGDGP
HA

Sequences:

>Translated_82_residues
MKYTTRDIGQLIRETRKKLGITQKTLALTSGTGLRFIIELEKGKETCEVGKVLTVLHTLGIKMTLTPPAATAQEGSGDGP
HA
>Mature_82_residues
MKYTTRDIGQLIRETRKKLGITQKTLALTSGTGLRFIIELEKGKETCEVGKVLTVLHTLGIKMTLTPPAATAQEGSGDGP
HA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR017507 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 8821; Mature: 8821

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYTTRDIGQLIRETRKKLGITQKTLALTSGTGLRFIIELEKGKETCEVGKVLTVLHTLG
CCCCHHHHHHHHHHHHHHCCCCCHHEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHC
IKMTLTPPAATAQEGSGDGPHA
CEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKYTTRDIGQLIRETRKKLGITQKTLALTSGTGLRFIIELEKGKETCEVGKVLTVLHTLG
CCCCHHHHHHHHHHHHHHCCCCCHHEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHC
IKMTLTPPAATAQEGSGDGPHA
CEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]