| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621175
Identifier: 116621175
GI number: 116621175
Start: 2611288
End: 2611824
Strand: Reverse
Name: 116621175
Synonym: Acid_2056
Alternate gene names: NA
Gene position: 2611824-2611288 (Counterclockwise)
Preceding gene: 116621180
Following gene: 116621174
Centisome position: 26.21
GC content: 59.59
Gene sequence:
>537_bases GTGATCTGCATTTCCGTTCACCTCCTTAGCCCCATTTTAGGCTTGGCATCGATTGCGCGCCGACGAAACGGGTTACGCCT GAAGCCTCCATCTGCTTCCAGCGAGCGTAAGTGCCCGCCCGTGGGCAGGTGCCGGTATTCCGTCACGCCCTCGGACCTTC TCCCGCCGGGCGCGAGATCTTCCCTTTTATTTTTAATGCCTTACAACACTCACAGTGTGGCGCGCCGACTGCACTTCCCT TTGCCTGAAATGATGAAAATCCAGGTGGAGGAGCGCGACGGAGAAGTCATCTTGCTGGTCGAGGGCCGTTTGGCAGGAGA CTTTGTACCCGAACTCCAACGCTGCTGGGAAGCGGCCCGCACCGGACACCCGCGGCGGAGGATCCAGGTGGATCTAAAAG GCGTAACCTGCGTGGACCGCGGCGGTCGGTGCCTGCTCCAGATGATGTATGGCAACGGAGTCGATTTCCGGCGGGCGGGC CTGGCCGTGCAAGACATTCTCGAACAGATCACGGGGCAACCGGAATGCAAACACTAA
Upstream 100 bases:
>100_bases TCACTGAGGGAGTAACGCCGTCCGGAAGGCCAACAGAATCAGCGCGAACCCGACCACCAACATCAGCGTAACGGCAAATT GCCCGAAAACCGGTCCGTGC
Downstream 100 bases:
>100_bases CGGATCTCTACAGGCTCGCTTACTTCCTTACGGGCAAATGCGATGCAGGGCTCGATGCCACACTTGAGGCGGTCGATTCC ACCGGGGATTTTTTCTCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MICISVHLLSPILGLASIARRRNGLRLKPPSASSERKCPPVGRCRYSVTPSDLLPPGARSSLLFLMPYNTHSVARRLHFP LPEMMKIQVEERDGEVILLVEGRLAGDFVPELQRCWEAARTGHPRRRIQVDLKGVTCVDRGGRCLLQMMYGNGVDFRRAG LAVQDILEQITGQPECKH
Sequences:
>Translated_178_residues MICISVHLLSPILGLASIARRRNGLRLKPPSASSERKCPPVGRCRYSVTPSDLLPPGARSSLLFLMPYNTHSVARRLHFP LPEMMKIQVEERDGEVILLVEGRLAGDFVPELQRCWEAARTGHPRRRIQVDLKGVTCVDRGGRCLLQMMYGNGVDFRRAG LAVQDILEQITGQPECKH >Mature_178_residues MICISVHLLSPILGLASIARRRNGLRLKPPSASSERKCPPVGRCRYSVTPSDLLPPGARSSLLFLMPYNTHSVARRLHFP LPEMMKIQVEERDGEVILLVEGRLAGDFVPELQRCWEAARTGHPRRRIQVDLKGVTCVDRGGRCLLQMMYGNGVDFRRAG LAVQDILEQITGQPECKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19921; Mature: 19921
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICISVHLLSPILGLASIARRRNGLRLKPPSASSERKCPPVGRCRYSVTPSDLLPPGARS CEEEEHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEEECCCHHCCCCCCCC SLLFLMPYNTHSVARRLHFPLPEMMKIQVEERDGEVILLVEGRLAGDFVPELQRCWEAAR CEEEEEECCHHHHHHHHCCCCCHHHEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHH TGHPRRRIQVDLKGVTCVDRGGRCLLQMMYGNGVDFRRAGLAVQDILEQITGQPECKH CCCCCCEEEEEECCEEEECCCCCEEEEEHHCCCCCHHHHCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MICISVHLLSPILGLASIARRRNGLRLKPPSASSERKCPPVGRCRYSVTPSDLLPPGARS CEEEEHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEEECCCHHCCCCCCCC SLLFLMPYNTHSVARRLHFPLPEMMKIQVEERDGEVILLVEGRLAGDFVPELQRCWEAAR CEEEEEECCHHHHHHHHCCCCCHHHEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHH TGHPRRRIQVDLKGVTCVDRGGRCLLQMMYGNGVDFRRAGLAVQDILEQITGQPECKH CCCCCCEEEEEECCEEEECCCCCEEEEEHHCCCCCHHHHCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA