| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is lon
Identifier: 116621146
GI number: 116621146
Start: 2566235
End: 2568655
Strand: Direct
Name: lon
Synonym: Acid_2027
Alternate gene names: 116621146
Gene position: 2566235-2568655 (Clockwise)
Preceding gene: 116621145
Following gene: 116621147
Centisome position: 25.75
GC content: 59.56
Gene sequence:
>2421_bases ATGCTTACTTCAAAGGAAAAATCCGATACAAAACGTCTGCCGATGATGCCCATTCGCGACGTGGTCATCTTTCCGTACAT GATGACCCCCTTCGTAGTGGGACGTGAATCGAGCGTGCGGGCGTTGGAAGAGGCGATGGCCGGCGACAAGAAGATCTTTC TCGCCACTCAGCACGACGCCTCCATCGACGAACCCAAACCCAACGAGATTTACAGCGTCGGCACCATCGTCAACATCGTC CAGAGCCTCAAGCTGCCGGACGGCAACATCAAAGTACTGGTGGAAGGCGTCGAGCGCGCCAAGGTGGTTTCGGTCGCCGA CGACGAAGGCTTCTTCCGCGCCACCGTGCGGACGTCGGGCTTCAAGGTAGAAACCGGTCCGCAGCTGGACGCGCTGATCA GCCGCGTGACCACCCTGTTTGAGCAGTATGTAAAGCTCAGCCAGAACCTCAACTACGAGACCATGGTGGCCGCGATCCGG GTGGATGAACCCGGCAAGCTGGCCGATACCGTGGGCGCCAACCTGCAGCTCACCATCGAAGAGAAGCAGGAGCTGCTCGA AATCTTCGACCCCATCGATAGACTGACGCGAGTCGCGGAGATGCTCGATATCGAAATCGAGAAGCTCAACGTGGACCGCA CCATTCAGGGCCGCGTCAAGCGGCAGATGGAAAAGGCGCAAAAAGAGTATTACCTCAACGAAAAGATCAAGGCCATCCAG AAGGAGCTGGGCCGCGGCGAGAAGAGCGAAATCGATGAGCTGAAGCGGCGCATCGAAGAAGCCGGCATGACCGCCGATGC GCAGGAAAAGGCCATGGCGGAGCTCAAGCGGCTGGAGAACATGCCGCCCATGTCCGCCGAGAGCACGGTCAGCCGCAACT ATCTCGACTGGCTGCTGGCGGTGCCGTGGAAGAAAAAATCCAAGGAAATCCGCGATCTCAAATTCGCCGAGGGCGTGCTC GAAGCCGACCACTACGGCCTCGAAAAGATCAAGGAGCGCATCCTGGAGTTCCTGGCGGTGCGCCGCCTGGTAAAGAATCC CAAGGGCAGCATCCTCTGTTTCGTGGGACCTCCGGGCGTGGGCAAGACCTCGCTCGGGATGTCGATCGCGAAGGCCACCG GCCGCAAGTTCGTCCGCATGTCGCTCGGCGGCGTGCGCGATGAAGCCGAAGTCCGCGGGCACCGCCGCACCTACATCGGC GCGCTGCCGGGGCAGATCATCCAGATGATGAAAAAGGCGGGGACTCGCAACCCGGTCTTCATGCTGGACGAAGTCGATAA AATGTCGATGGATTTCCGCGGCGACCCGAGCGCGGCGCTGCTCGAAGTGCTCGACCCCGAACAGAATTTCATGTTCGTGG ACCATTACCTGGACGTCGAATACGACCTCAGCCAGGTCTTCTTCGTGGCCACCGCCAACGTGATGCACACCATCCCGGCG GCCCTGCAGGACCGCATGGAAGTCATCCGTCTCTCCGGCTACACCGAGCTTGAGAAAATGGAAATCGCCAAGCGCTTCCT GGTGAAGAAGCAGATTGAAGCCACCGGCCTGGACAGCAAGCAGATCGATTTCCAGGACGATGGCATCAACAGCCTGATTC AGTACTACACGCGCGAAGCCGGCGTGCGCAACCTGGAACGCGAAATCGGCAACGTCTGCCGCAAAGTAGCGCGGCAGGTG GTCAACGCCGAGAGCGGCAAGGATAAGAAGGCGCCCGCCAAAGCCGTGATCAACGGGGATAAGGTGCCGGAGCTGCTCGG TCCGTGGAAATTCCGCGACCTGGTGGTTGAGAAAAAGAACGAAATCGGCGCCGCCACCGGCCTGGCCTGGACCGAAGTGG GCGGACAATTGCTCACTGTGGAATGCACGCTGATGGAAGGCAAGGGAAAGCTGACCATCACCGGAAAGCTGGGCGAGGTG ATGCAGGAATCGGCGCAGGCCGCGATGAGCTATATTCGTTCGCGCGCCATGTCGCTCGGAATTCCGCGGGATTTCTATCG CAACCTGGATTTGCACATTCACATTCCCGAGGGAGCCATTCCGAAAGATGGTCCGTCGGCCGGTATCACGCTCGCGACCA CGATTTGCAGCGCATTGACCAAGATTCCGGTGCGCGGCGATCTGGCGATGACGGGCGAGATCACGCTGCGCGGCAAGGTG CTGCCGATCGGCGGATTGAAAGAGAAGTTGATGGCGGCCCATCGCCATGGCATCCTGGAAGCGATCATGCCGAAGGAGAA CGAAAAGGATCTCCCGGACATTCCAGATGCCATCAAGAAGACCATGAAGCTTCACTTCGTGGAGTCGATGGACGAAGTTT TAAAGATCGCGCTGGAGCGGGAGATTGTGGCTCTTCCGATTCCGGGCGCCGAGCTCCCGGTGGAAGCTGGCAAGCCCGCC GAAGAGACGGTCGCGCACTAG
Upstream 100 bases:
>100_bases CAGTCTTACAATATTAGAAAAGGCCGGTTAATACTCAGCGTCCTCAAAAACCGCGCAAAACCTGGGCACGGGGGTTGAAC TATACCTCCTGGGGAGAATA
Downstream 100 bases:
>100_bases TTTTGGGGGGCCGGACCGCAAAATCCGGCCCCTGCCCTAATTCGCGGCGGTACCGCGAAAGGTACGAATGAGTTCCTTGA AAGCCGAATTTGTAGTAAGC
Product: Lon-A peptidase
Products: NA
Alternate protein names: ATP-dependent protease La
Number of amino acids: Translated: 806; Mature: 806
Protein sequence:
>806_residues MLTSKEKSDTKRLPMMPIRDVVIFPYMMTPFVVGRESSVRALEEAMAGDKKIFLATQHDASIDEPKPNEIYSVGTIVNIV QSLKLPDGNIKVLVEGVERAKVVSVADDEGFFRATVRTSGFKVETGPQLDALISRVTTLFEQYVKLSQNLNYETMVAAIR VDEPGKLADTVGANLQLTIEEKQELLEIFDPIDRLTRVAEMLDIEIEKLNVDRTIQGRVKRQMEKAQKEYYLNEKIKAIQ KELGRGEKSEIDELKRRIEEAGMTADAQEKAMAELKRLENMPPMSAESTVSRNYLDWLLAVPWKKKSKEIRDLKFAEGVL EADHYGLEKIKERILEFLAVRRLVKNPKGSILCFVGPPGVGKTSLGMSIAKATGRKFVRMSLGGVRDEAEVRGHRRTYIG ALPGQIIQMMKKAGTRNPVFMLDEVDKMSMDFRGDPSAALLEVLDPEQNFMFVDHYLDVEYDLSQVFFVATANVMHTIPA ALQDRMEVIRLSGYTELEKMEIAKRFLVKKQIEATGLDSKQIDFQDDGINSLIQYYTREAGVRNLEREIGNVCRKVARQV VNAESGKDKKAPAKAVINGDKVPELLGPWKFRDLVVEKKNEIGAATGLAWTEVGGQLLTVECTLMEGKGKLTITGKLGEV MQESAQAAMSYIRSRAMSLGIPRDFYRNLDLHIHIPEGAIPKDGPSAGITLATTICSALTKIPVRGDLAMTGEITLRGKV LPIGGLKEKLMAAHRHGILEAIMPKENEKDLPDIPDAIKKTMKLHFVESMDEVLKIALEREIVALPIPGAELPVEAGKPA EETVAH
Sequences:
>Translated_806_residues MLTSKEKSDTKRLPMMPIRDVVIFPYMMTPFVVGRESSVRALEEAMAGDKKIFLATQHDASIDEPKPNEIYSVGTIVNIV QSLKLPDGNIKVLVEGVERAKVVSVADDEGFFRATVRTSGFKVETGPQLDALISRVTTLFEQYVKLSQNLNYETMVAAIR VDEPGKLADTVGANLQLTIEEKQELLEIFDPIDRLTRVAEMLDIEIEKLNVDRTIQGRVKRQMEKAQKEYYLNEKIKAIQ KELGRGEKSEIDELKRRIEEAGMTADAQEKAMAELKRLENMPPMSAESTVSRNYLDWLLAVPWKKKSKEIRDLKFAEGVL EADHYGLEKIKERILEFLAVRRLVKNPKGSILCFVGPPGVGKTSLGMSIAKATGRKFVRMSLGGVRDEAEVRGHRRTYIG ALPGQIIQMMKKAGTRNPVFMLDEVDKMSMDFRGDPSAALLEVLDPEQNFMFVDHYLDVEYDLSQVFFVATANVMHTIPA ALQDRMEVIRLSGYTELEKMEIAKRFLVKKQIEATGLDSKQIDFQDDGINSLIQYYTREAGVRNLEREIGNVCRKVARQV VNAESGKDKKAPAKAVINGDKVPELLGPWKFRDLVVEKKNEIGAATGLAWTEVGGQLLTVECTLMEGKGKLTITGKLGEV MQESAQAAMSYIRSRAMSLGIPRDFYRNLDLHIHIPEGAIPKDGPSAGITLATTICSALTKIPVRGDLAMTGEITLRGKV LPIGGLKEKLMAAHRHGILEAIMPKENEKDLPDIPDAIKKTMKLHFVESMDEVLKIALEREIVALPIPGAELPVEAGKPA EETVAH >Mature_806_residues MLTSKEKSDTKRLPMMPIRDVVIFPYMMTPFVVGRESSVRALEEAMAGDKKIFLATQHDASIDEPKPNEIYSVGTIVNIV QSLKLPDGNIKVLVEGVERAKVVSVADDEGFFRATVRTSGFKVETGPQLDALISRVTTLFEQYVKLSQNLNYETMVAAIR VDEPGKLADTVGANLQLTIEEKQELLEIFDPIDRLTRVAEMLDIEIEKLNVDRTIQGRVKRQMEKAQKEYYLNEKIKAIQ KELGRGEKSEIDELKRRIEEAGMTADAQEKAMAELKRLENMPPMSAESTVSRNYLDWLLAVPWKKKSKEIRDLKFAEGVL EADHYGLEKIKERILEFLAVRRLVKNPKGSILCFVGPPGVGKTSLGMSIAKATGRKFVRMSLGGVRDEAEVRGHRRTYIG ALPGQIIQMMKKAGTRNPVFMLDEVDKMSMDFRGDPSAALLEVLDPEQNFMFVDHYLDVEYDLSQVFFVATANVMHTIPA ALQDRMEVIRLSGYTELEKMEIAKRFLVKKQIEATGLDSKQIDFQDDGINSLIQYYTREAGVRNLEREIGNVCRKVARQV VNAESGKDKKAPAKAVINGDKVPELLGPWKFRDLVVEKKNEIGAATGLAWTEVGGQLLTVECTLMEGKGKLTITGKLGEV MQESAQAAMSYIRSRAMSLGIPRDFYRNLDLHIHIPEGAIPKDGPSAGITLATTICSALTKIPVRGDLAMTGEITLRGKV LPIGGLKEKLMAAHRHGILEAIMPKENEKDLPDIPDAIKKTMKLHFVESMDEVLKIALEREIVALPIPGAELPVEAGKPA EETVAH
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain
Homologues:
Organism=Homo sapiens, GI31377667, Length=564, Percent_Identity=46.2765957446808, Blast_Score=525, Evalue=1e-149, Organism=Homo sapiens, GI21396489, Length=636, Percent_Identity=43.0817610062893, Blast_Score=511, Evalue=1e-144, Organism=Escherichia coli, GI1786643, Length=778, Percent_Identity=54.3701799485861, Blast_Score=843, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=687, Percent_Identity=39.3013100436681, Blast_Score=464, Evalue=1e-131, Organism=Caenorhabditis elegans, GI17556486, Length=546, Percent_Identity=38.8278388278388, Blast_Score=425, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6319449, Length=702, Percent_Identity=39.1737891737892, Blast_Score=478, Evalue=1e-135, Organism=Drosophila melanogaster, GI221513036, Length=638, Percent_Identity=44.2006269592476, Blast_Score=502, Evalue=1e-142, Organism=Drosophila melanogaster, GI24666867, Length=638, Percent_Identity=44.2006269592476, Blast_Score=501, Evalue=1e-142,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): LON_SOLUE (Q026Q2)
Other databases:
- EMBL: CP000473 - RefSeq: YP_823302.1 - ProteinModelPortal: Q026Q2 - STRING: Q026Q2 - MEROPS: S16.001 - GeneID: 4429773 - GenomeReviews: CP000473_GR - KEGG: sus:Acid_2027 - NMPDR: fig|234267.9.peg.1929 - eggNOG: COG0466 - HOGENOM: HBG566281 - OMA: HTFQDHY - PhylomeDB: Q026Q2 - ProtClustDB: CLSK774578 - GO: GO:0005737 - GO: GO:0006508 - InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 - PRINTS: PR00830 - SMART: SM00382 - SMART: SM00464 - TIGRFAMs: TIGR00763
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C; SSF88697 PUA-like; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =3.4.21.53
Molecular weight: Translated: 89837; Mature: 89837
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS01046 LON_SER
Important sites: ACT_SITE 686-686 ACT_SITE 729-729
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSKEKSDTKRLPMMPIRDVVIFPYMMTPFVVGRESSVRALEEAMAGDKKIFLATQHDA CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCHHHHHHHHHHCCCCEEEEEECCCC SIDEPKPNEIYSVGTIVNIVQSLKLPDGNIKVLVEGVERAKVVSVADDEGFFRATVRTSG CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEEECCC FKVETGPQLDALISRVTTLFEQYVKLSQNLNYETMVAAIRVDEPGKLADTVGANLQLTIE EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCHHHHCCCCEEEEHH EKQELLEIFDPIDRLTRVAEMLDIEIEKLNVDRTIQGRVKRQMEKAQKEYYLNEKIKAIQ HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KELGRGEKSEIDELKRRIEEAGMTADAQEKAMAELKRLENMPPMSAESTVSRNYLDWLLA HHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC VPWKKKSKEIRDLKFAEGVLEADHYGLEKIKERILEFLAVRRLVKNPKGSILCFVGPPGV CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC GKTSLGMSIAKATGRKFVRMSLGGVRDEAEVRGHRRTYIGALPGQIIQMMKKAGTRNPVF CCHHHHHHHHHHHHHHEEHHHHCCCCCHHHHCCCCHHEEECCHHHHHHHHHHCCCCCCEE MLDEVDKMSMDFRGDPSAALLEVLDPEQNFMFVDHYLDVEYDLSQVFFVATANVMHTIPA EEECHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCEECHHHHHHHHHHHHHHHHHH ALQDRMEVIRLSGYTELEKMEIAKRFLVKKQIEATGLDSKQIDFQDDGINSLIQYYTREA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH GVRNLEREIGNVCRKVARQVVNAESGKDKKAPAKAVINGDKVPELLGPWKFRDLVVEKKN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHCC EIGAATGLAWTEVGGQLLTVECTLMEGKGKLTITGKLGEVMQESAQAAMSYIRSRAMSLG CCCHHCCCHHHHCCCEEEEEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCC IPRDFYRNLDLHIHIPEGAIPKDGPSAGITLATTICSALTKIPVRGDLAMTGEITLRGKV CCHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECEEEEEEEE LPIGGLKEKLMAAHRHGILEAIMPKENEKDLPDIPDAIKKTMKLHFVESMDEVLKIALER EECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC EIVALPIPGAELPVEAGKPAEETVAH CEEEEECCCCCCCCCCCCCHHHHCCC >Mature Secondary Structure MLTSKEKSDTKRLPMMPIRDVVIFPYMMTPFVVGRESSVRALEEAMAGDKKIFLATQHDA CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCHHHHHHHHHHCCCCEEEEEECCCC SIDEPKPNEIYSVGTIVNIVQSLKLPDGNIKVLVEGVERAKVVSVADDEGFFRATVRTSG CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEEECCC FKVETGPQLDALISRVTTLFEQYVKLSQNLNYETMVAAIRVDEPGKLADTVGANLQLTIE EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCHHHHCCCCEEEEHH EKQELLEIFDPIDRLTRVAEMLDIEIEKLNVDRTIQGRVKRQMEKAQKEYYLNEKIKAIQ HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KELGRGEKSEIDELKRRIEEAGMTADAQEKAMAELKRLENMPPMSAESTVSRNYLDWLLA HHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC VPWKKKSKEIRDLKFAEGVLEADHYGLEKIKERILEFLAVRRLVKNPKGSILCFVGPPGV CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC GKTSLGMSIAKATGRKFVRMSLGGVRDEAEVRGHRRTYIGALPGQIIQMMKKAGTRNPVF CCHHHHHHHHHHHHHHEEHHHHCCCCCHHHHCCCCHHEEECCHHHHHHHHHHCCCCCCEE MLDEVDKMSMDFRGDPSAALLEVLDPEQNFMFVDHYLDVEYDLSQVFFVATANVMHTIPA EEECHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCEECHHHHHHHHHHHHHHHHHH ALQDRMEVIRLSGYTELEKMEIAKRFLVKKQIEATGLDSKQIDFQDDGINSLIQYYTREA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH GVRNLEREIGNVCRKVARQVVNAESGKDKKAPAKAVINGDKVPELLGPWKFRDLVVEKKN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHCC EIGAATGLAWTEVGGQLLTVECTLMEGKGKLTITGKLGEVMQESAQAAMSYIRSRAMSLG CCCHHCCCHHHHCCCEEEEEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCC IPRDFYRNLDLHIHIPEGAIPKDGPSAGITLATTICSALTKIPVRGDLAMTGEITLRGKV CCHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECEEEEEEEE LPIGGLKEKLMAAHRHGILEAIMPKENEKDLPDIPDAIKKTMKLHFVESMDEVLKIALER EECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC EIVALPIPGAELPVEAGKPAEETVAH CEEEEECCCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA