Click here to switch to the map view.

The map label for this gene is 116621122

Identifier: 116621122

GI number: 116621122

Start: 2531934

End: 2532722

Strand: Reverse

Name: 116621122

Synonym: Acid_2003

Alternate gene names: NA

Gene position: 2532722-2531934 (Counterclockwise)

Preceding gene: 116621123

Following gene: 116621121

Centisome position: 25.41

GC content: 58.17

Gene sequence:

>789_bases
ATGGTTAACCGACCTCGGTCCATGTTACTGGCGGCCAGTTTGGGGGCCGTTCTCTCATTCGGACAAACCGGTGTAGTTAC
ACCCAACTCAATGCTGGAAGGCACTCGTGTGCCTCCGCAAGCAGAACCGCCGAAACCCGTGCTTTCGCCGGAGACCCGCG
GCGACATTCTGATGGCGCGCAAGATGTATCGCGAAGCCATCGAAGCGTTCGCGGAAGGTTCGCCGAAAGACGCCGTGTTA
CGGAATAAAACGGGCATCGCTTACCACCAGCTGATGCAGCTCGATAGCGCCAGGAAATGCTACGAGCAGGCAGTCAAACT
GAAGCCCGACTACCACGAAGCGATCAATAATCTGGGCACCATCTGGTACGCCAAGAAAAGTTATCGCCGCGCGGTTTCCC
AGTACAAGAAGGCGATCAAACTCGCGCCGGATTCGGCGAGCATTCACAGCAACCTGGGGACCGCGTATTTCGCGCGCAAA
GAATTCGAGCCGGCGATGGAGGAATTCCGCGTCGCGCTGCAACTGGACCCGAACGTGTTTGAGCATCACAGCTCGTACGG
CGTGATGCTGCAGGAGCGCAGCGTTCAGGATCGCGCGAAATTCCACTACTCCATGGCCGCGCTTTATGCGCAGGGCGGCC
GCAGCGAACTGGCGCTGCAATACTTGCGCAAAGCCCTCGAAGAGGGTTTCCACGAACGCAAGAAGCTGGATAGCGATCCG
GCGTTCGCATCCCTGCGGGAACTCCCCGAGTTCAAGCAACTACTTACCCTGGAGCCTCGTGTCCTTTAG

Upstream 100 bases:

>100_bases
CGGCTCCGGAGACACCCACCAAAGATAACAGCAAGAAGCCGGAGAAGAAGGGGATTTTCCAGCGCATATTTGGTGTGTTT
AAATAGCTCCAGGGGGCCTT

Downstream 100 bases:

>100_bases
AAAAGCCGGGCGGGGTCCGACCCCGCCCATTCTGTTGTTCCTCCTTGTCCTCTCCGGTTGTTCCCGACAAGCCAATCAGC
CGCAAGCGCAGCGAATCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Peptidase; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Tetratricopeptide Repeat-Containing Protein; TPR Repeat Protein; Tetratricopeptide Repeat Family Protein; TPR Domain Protein; Tetratricopeptide Protein; Tetratricopeptide Repeat Family; TPR Domain Containing Protein; Sulfotransferase; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat Domain-Containing Protein; TPR Repeat; Sel1 Domain Protein Repeat-Containing Protein; Protein Kinase; Glycosyl Transferase Family Protein

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MVNRPRSMLLAASLGAVLSFGQTGVVTPNSMLEGTRVPPQAEPPKPVLSPETRGDILMARKMYREAIEAFAEGSPKDAVL
RNKTGIAYHQLMQLDSARKCYEQAVKLKPDYHEAINNLGTIWYAKKSYRRAVSQYKKAIKLAPDSASIHSNLGTAYFARK
EFEPAMEEFRVALQLDPNVFEHHSSYGVMLQERSVQDRAKFHYSMAALYAQGGRSELALQYLRKALEEGFHERKKLDSDP
AFASLRELPEFKQLLTLEPRVL

Sequences:

>Translated_262_residues
MVNRPRSMLLAASLGAVLSFGQTGVVTPNSMLEGTRVPPQAEPPKPVLSPETRGDILMARKMYREAIEAFAEGSPKDAVL
RNKTGIAYHQLMQLDSARKCYEQAVKLKPDYHEAINNLGTIWYAKKSYRRAVSQYKKAIKLAPDSASIHSNLGTAYFARK
EFEPAMEEFRVALQLDPNVFEHHSSYGVMLQERSVQDRAKFHYSMAALYAQGGRSELALQYLRKALEEGFHERKKLDSDP
AFASLRELPEFKQLLTLEPRVL
>Mature_262_residues
MVNRPRSMLLAASLGAVLSFGQTGVVTPNSMLEGTRVPPQAEPPKPVLSPETRGDILMARKMYREAIEAFAEGSPKDAVL
RNKTGIAYHQLMQLDSARKCYEQAVKLKPDYHEAINNLGTIWYAKKSYRRAVSQYKKAIKLAPDSASIHSNLGTAYFARK
EFEPAMEEFRVALQLDPNVFEHHSSYGVMLQERSVQDRAKFHYSMAALYAQGGRSELALQYLRKALEEGFHERKKLDSDP
AFASLRELPEFKQLLTLEPRVL

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=184, Percent_Identity=26.6304347826087, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI32307148, Length=184, Percent_Identity=26.6304347826087, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17647755, Length=148, Percent_Identity=28.3783783783784, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24585827, Length=148, Percent_Identity=28.3783783783784, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24585829, Length=148, Percent_Identity=28.3783783783784, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29589; Mature: 29589

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNRPRSMLLAASLGAVLSFGQTGVVTPNSMLEGTRVPPQAEPPKPVLSPETRGDILMAR
CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
KMYREAIEAFAEGSPKDAVLRNKTGIAYHQLMQLDSARKCYEQAVKLKPDYHEAINNLGT
HHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IWYAKKSYRRAVSQYKKAIKLAPDSASIHSNLGTAYFARKEFEPAMEEFRVALQLDPNVF
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCHHH
EHHSSYGVMLQERSVQDRAKFHYSMAALYAQGGRSELALQYLRKALEEGFHERKKLDSDP
HHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
AFASLRELPEFKQLLTLEPRVL
HHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVNRPRSMLLAASLGAVLSFGQTGVVTPNSMLEGTRVPPQAEPPKPVLSPETRGDILMAR
CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
KMYREAIEAFAEGSPKDAVLRNKTGIAYHQLMQLDSARKCYEQAVKLKPDYHEAINNLGT
HHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IWYAKKSYRRAVSQYKKAIKLAPDSASIHSNLGTAYFARKEFEPAMEEFRVALQLDPNVF
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCHHH
EHHSSYGVMLQERSVQDRAKFHYSMAALYAQGGRSELALQYLRKALEEGFHERKKLDSDP
HHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
AFASLRELPEFKQLLTLEPRVL
HHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA