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The map label for this gene is 116621090

Identifier: 116621090

GI number: 116621090

Start: 2479437

End: 2480309

Strand: Reverse

Name: 116621090

Synonym: Acid_1971

Alternate gene names: NA

Gene position: 2480309-2479437 (Counterclockwise)

Preceding gene: 116621108

Following gene: 116621089

Centisome position: 24.89

GC content: 55.9

Gene sequence:

>873_bases
ATGTCCACGACACTCCGCCTGCTCGCGCTCACTTTCACGCTCATGTTAGGTGCCTCACTCAGCTTTGGTTCCGCGATCGT
ACCCGGATTCAACACAACCAGCGATGGACGCAATGATGACGGCACCTATACAACCGGTGGGTGCAACAACGATTCACCGG
GCGGAACTTGTTCCGGCACCTTGGTGCCGATCGGTTTCAGCGTGAACTTTTACGGCAGCACCAGCGATTCTCTCTACATC
AACACGAACGGCGATGTCACCTTTGACGCCCCGTTGGCGACGTTTACTCCCTTCGCCCTGGACGATGCGTTCCGCCAGAT
TATCGCCCCCTTTTTCGCTGATTTAGATACCAGAAATCCGGCAAGCGGCGTGGTTATGTTCGGCTCGGGAACATTTGACG
GCCGGGCCGCATTCGGCGTCGATTGGATTAATGTCGGGTATTTCGACCAGGAAGTCGATAACACCAATAGCTTTCAAATG
CTCCTCGTAGACCGGTCCGACACGGGAGCTGGAAATTTCGATCTTGTGTTCAACTATGACCGCATCCTCTTCGAAACCGG
TGACGCAAGTTTCGGTATCGGCGGGCTGGGCGGTTTGTCCGCCCGCGTTGGATTCTCCAATGGCACGGGACTGCCAGGGG
AATCTTTTGAACTTCCCGGCTCAGGCATTCCCGGTTCGTTCATTGACGGCGGAACGAATGCGCTGGTCACTCACAGCCTG
AACAGCGACGTGGCGGGACGCTATATTTTCGGTGCTCGCGATGGCCAAATCCCTGTCGATACCACCACCACTCCAGAGCC
TGGAACTTGTTTTCTGATGATCGCCGGATCGGTTCTCCTGCTGTTCAAACAGCGCTCTTCCCGCCCCGTATAG

Upstream 100 bases:

>100_bases
TCATCCGTAGGTGAGTCGAATATACTTGGATCGGGTTAGGTAGGTCACATAGTTCAACGCCGAATGCCCCTCTTTGAGGG
GTACATCTGAGGAAAATGCC

Downstream 100 bases:

>100_bases
TTTTGCTCCCTGCATCACTGAATCGTCGAAAGCGTCCAGCTTGTCAGTGTAAGTCTACTTACGCAAGTGGCGCCATTTTT
CTAGCACGGTTCGATGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Nidogen Extracellular Domain-Containing Protein; Outer Membrane Autotransporter

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MSTTLRLLALTFTLMLGASLSFGSAIVPGFNTTSDGRNDDGTYTTGGCNNDSPGGTCSGTLVPIGFSVNFYGSTSDSLYI
NTNGDVTFDAPLATFTPFALDDAFRQIIAPFFADLDTRNPASGVVMFGSGTFDGRAAFGVDWINVGYFDQEVDNTNSFQM
LLVDRSDTGAGNFDLVFNYDRILFETGDASFGIGGLGGLSARVGFSNGTGLPGESFELPGSGIPGSFIDGGTNALVTHSL
NSDVAGRYIFGARDGQIPVDTTTTPEPGTCFLMIAGSVLLLFKQRSSRPV

Sequences:

>Translated_290_residues
MSTTLRLLALTFTLMLGASLSFGSAIVPGFNTTSDGRNDDGTYTTGGCNNDSPGGTCSGTLVPIGFSVNFYGSTSDSLYI
NTNGDVTFDAPLATFTPFALDDAFRQIIAPFFADLDTRNPASGVVMFGSGTFDGRAAFGVDWINVGYFDQEVDNTNSFQM
LLVDRSDTGAGNFDLVFNYDRILFETGDASFGIGGLGGLSARVGFSNGTGLPGESFELPGSGIPGSFIDGGTNALVTHSL
NSDVAGRYIFGARDGQIPVDTTTTPEPGTCFLMIAGSVLLLFKQRSSRPV
>Mature_289_residues
STTLRLLALTFTLMLGASLSFGSAIVPGFNTTSDGRNDDGTYTTGGCNNDSPGGTCSGTLVPIGFSVNFYGSTSDSLYIN
TNGDVTFDAPLATFTPFALDDAFRQIIAPFFADLDTRNPASGVVMFGSGTFDGRAAFGVDWINVGYFDQEVDNTNSFQML
LVDRSDTGAGNFDLVFNYDRILFETGDASFGIGGLGGLSARVGFSNGTGLPGESFELPGSGIPGSFIDGGTNALVTHSLN
SDVAGRYIFGARDGQIPVDTTTTPEPGTCFLMIAGSVLLLFKQRSSRPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI122937283, Length=223, Percent_Identity=29.5964125560538, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30333; Mature: 30202

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTLRLLALTFTLMLGASLSFGSAIVPGFNTTSDGRNDDGTYTTGGCNNDSPGGTCSGT
CCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCE
LVPIGFSVNFYGSTSDSLYINTNGDVTFDAPLATFTPFALDDAFRQIIAPFFADLDTRNP
EEEEEEEEEEECCCCCEEEEECCCCEEECCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
ASGVVMFGSGTFDGRAAFGVDWINVGYFDQEVDNTNSFQMLLVDRSDTGAGNFDLVFNYD
CCCEEEEECCCCCCCEEECEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECC
RILFETGDASFGIGGLGGLSARVGFSNGTGLPGESFELPGSGIPGSFIDGGTNALVTHSL
EEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEECC
NSDVAGRYIFGARDGQIPVDTTTTPEPGTCFLMIAGSVLLLFKQRSSRPV
CCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCC
>Mature Secondary Structure 
STTLRLLALTFTLMLGASLSFGSAIVPGFNTTSDGRNDDGTYTTGGCNNDSPGGTCSGT
CCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCE
LVPIGFSVNFYGSTSDSLYINTNGDVTFDAPLATFTPFALDDAFRQIIAPFFADLDTRNP
EEEEEEEEEEECCCCCEEEEECCCCEEECCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
ASGVVMFGSGTFDGRAAFGVDWINVGYFDQEVDNTNSFQMLLVDRSDTGAGNFDLVFNYD
CCCEEEEECCCCCCCEEECEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECC
RILFETGDASFGIGGLGGLSARVGFSNGTGLPGESFELPGSGIPGSFIDGGTNALVTHSL
EEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEECC
NSDVAGRYIFGARDGQIPVDTTTTPEPGTCFLMIAGSVLLLFKQRSSRPV
CCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA