| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116621108
Identifier: 116621108
GI number: 116621108
Start: 2512628
End: 2514355
Strand: Reverse
Name: 116621108
Synonym: Acid_1989
Alternate gene names: NA
Gene position: 2514355-2512628 (Counterclockwise)
Preceding gene: 116621112
Following gene: 116621090
Centisome position: 25.23
GC content: 61.86
Gene sequence:
>1728_bases ATGGAACCTGGGAACCGCCGTACGTTCATCCGGTCCGTGTGCCGCACCGCGGCGGTGTTCACGCTCGATCAATTGCTGTC CGGGCTCGACATGGACGTCCAATTTGTAAACGTCGCGCGCGAAGCCGGGCTGCGGGCCAAGACCATCTACGGCAGCGAGA AACGGAATCGGTACCTGATGGAGACCACCGGTTGCGGCGCGGCGTTCTTCGACTTCGACCAGGACGGATGGCTGGATATT TTCCTGGTGAACGGGTCGCGCTTCGAAGGCGGCTGGACGGCGGCGAATGCTCCCGTGAGCCGGCTCTACAAGAACAATCG CGATGGCACCTTTCAGGACGTCACCATGCAGGCCGGGATTGCCCGCACGGGATGGGGAGCGGGCTGCTGCGCGGGCGATT TCGACAACGACGGCCATGACGACCTGTTCGTGAGCTATTGGGGCGACTGCTCTCTGTGGAAGAACCTCGGCAACGGGAAA TTCATCGACGTCGCGGTGAAAGCGGGCGTGACCACGCGGACGGCGGCCGGCCGCAAGCGCAATAACACCGGCTGCGCCTT CGTGGATTACGACAAAGACGGGCATCTCGACCTGTTCGTCTCCAACTACCTCGAGTTCGACCCGAAGACGGCGCCGCTGC CGGAATCGGGTCCCTGCAAATACAAGGGCCTCATGGTGGCGTGCGGTCCGCCTGGCTTGCAGGGCGGTAAAAACATCCTC TTCCACAACAACGGCGACGGCACCTTCACGGATGTGTCGGAGAAGGCGGGAATTTTGAAGACGCCGGGAACATTCGGACT CGGGGTCGCGGCTTTCGATTTCGACAACGACGGCTGGCCGGACATCTACGTAGCCAACGATTCCACCTCGTCGGCGCTTT ATAAGAACAATCACGACGGCACCTTCGACGAGATCGCGATCGAGTCGGGCGTGGCCTACTCGGCGGACGGCAAGCCGCAG GCCGGCATGGGCGTGTCCGTTGCGGACTACGATTGCGACGGCAACTTCGACCTGGTGAAAACCAACTTCGCAGGCGACAC GACCAGTTTGTATCGCAACCTCGGCAAGGGCATGTTCGAGGACCAGACGTTTCAGGCCGGCCTGGGCAAGATCACGCGAT TCCTCGGCTGGGGTGTCGCATTCGCCGACGTCGATAACGACGGCTGGGCGGACATCGTGCAATGCAACGGTCACGTCTAC CCGGAAGTTGGCGAGACGCTGGCGGAATCGGGCTATCGACAGCGCAAAGTCGTGTACCGGAATCTGCGTAATGGCAAATT CCAGGAAGTTTCGGACCAGATGGGACCCGGCATTATGGAGAGCGTCACCGGGCGTGGCATGGCGGTGGGGGATTTCGACA ATGATGGCGACCTGGACCTGCTGGTGAACTGCATAAACGATGTGCCGCAACTCCTGCGCTGCGATTCGCGGACTAAGAAC CACTGGATCAAGATCAGGACCGTGGGGACAAATTCGAACCGCAGCGGGATCGGCGCGCGCATCTATTGCTCCACCGGCGG CCCGGACAAACCGCACCGCCAGATGGACGAGGTGCGCAGCGGCAGCAGCTACCTCTCGCAGAGCGATCTGCGAGTGCACT TCGGATTGGGAGATGCGTCGTCCGCGGACCTGGAGATCCACTGGCCCAGCGGCGTAGTGGATCGACTCACCGCGGTCGCG GCCGACCGGGTGATCACGGTGGTGGAAGGTCAGGGCGAGAAGAGATAG
Upstream 100 bases:
>100_bases CGCGATAATCTTCATGGGTATCCCCTCTCAAGGTCGGCAGACTGGACCGACAATTGGCGAGATTCTATCAACAACACGGC GCGAATACAATGGAGTCAGT
Downstream 100 bases:
>100_bases GGACCACGGGACTGCCTCTCGCCCGTAAGCGGCTGCTCTATACCTTCAGGTCCCATCCCTTGCGGAGGAACGGCTTGACA TAGCGATTGGCTTCTTCGCT
Product: ASPIC/UnbV domain-containing protein
Products: NA
Alternate protein names: FG-GAP Repeat Domain Protein; ASPIC/UnbV Domain Protein; FG-GAP Repeat-Containing Protein; ASPIC/UnbV; FG-GAP Repeat Protein; Integrin-Like Protein; TPR Repeat-Containing Protein; PpiC-Type Peptidyl-Prolyl Cis-Trans Isomerase; Aspic/Unbv Domain Protein; FG-GAP Repeat- ASPIC/UnbV Domain-Containing Protein; Enediyne Biosynthesis Protein UnbV; Integrins Alpha Chain; Protein Containing FG-GAP Repeats; Secreted Protein Containing FG-GAP Repeats; Fg-Gap Repeat Protein; Aspic/Unbv; ASPIC And UnbV Domain Protein; RTX Family Protein Exoprotein; Protein Tyrosine Kinase Family; FG-GAP Repeat Protein/ASPIC/UnbV Domain Protein; Acid Secreted Protein ASPIC
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MEPGNRRTFIRSVCRTAAVFTLDQLLSGLDMDVQFVNVAREAGLRAKTIYGSEKRNRYLMETTGCGAAFFDFDQDGWLDI FLVNGSRFEGGWTAANAPVSRLYKNNRDGTFQDVTMQAGIARTGWGAGCCAGDFDNDGHDDLFVSYWGDCSLWKNLGNGK FIDVAVKAGVTTRTAAGRKRNNTGCAFVDYDKDGHLDLFVSNYLEFDPKTAPLPESGPCKYKGLMVACGPPGLQGGKNIL FHNNGDGTFTDVSEKAGILKTPGTFGLGVAAFDFDNDGWPDIYVANDSTSSALYKNNHDGTFDEIAIESGVAYSADGKPQ AGMGVSVADYDCDGNFDLVKTNFAGDTTSLYRNLGKGMFEDQTFQAGLGKITRFLGWGVAFADVDNDGWADIVQCNGHVY PEVGETLAESGYRQRKVVYRNLRNGKFQEVSDQMGPGIMESVTGRGMAVGDFDNDGDLDLLVNCINDVPQLLRCDSRTKN HWIKIRTVGTNSNRSGIGARIYCSTGGPDKPHRQMDEVRSGSSYLSQSDLRVHFGLGDASSADLEIHWPSGVVDRLTAVA ADRVITVVEGQGEKR
Sequences:
>Translated_575_residues MEPGNRRTFIRSVCRTAAVFTLDQLLSGLDMDVQFVNVAREAGLRAKTIYGSEKRNRYLMETTGCGAAFFDFDQDGWLDI FLVNGSRFEGGWTAANAPVSRLYKNNRDGTFQDVTMQAGIARTGWGAGCCAGDFDNDGHDDLFVSYWGDCSLWKNLGNGK FIDVAVKAGVTTRTAAGRKRNNTGCAFVDYDKDGHLDLFVSNYLEFDPKTAPLPESGPCKYKGLMVACGPPGLQGGKNIL FHNNGDGTFTDVSEKAGILKTPGTFGLGVAAFDFDNDGWPDIYVANDSTSSALYKNNHDGTFDEIAIESGVAYSADGKPQ AGMGVSVADYDCDGNFDLVKTNFAGDTTSLYRNLGKGMFEDQTFQAGLGKITRFLGWGVAFADVDNDGWADIVQCNGHVY PEVGETLAESGYRQRKVVYRNLRNGKFQEVSDQMGPGIMESVTGRGMAVGDFDNDGDLDLLVNCINDVPQLLRCDSRTKN HWIKIRTVGTNSNRSGIGARIYCSTGGPDKPHRQMDEVRSGSSYLSQSDLRVHFGLGDASSADLEIHWPSGVVDRLTAVA ADRVITVVEGQGEKR >Mature_575_residues MEPGNRRTFIRSVCRTAAVFTLDQLLSGLDMDVQFVNVAREAGLRAKTIYGSEKRNRYLMETTGCGAAFFDFDQDGWLDI FLVNGSRFEGGWTAANAPVSRLYKNNRDGTFQDVTMQAGIARTGWGAGCCAGDFDNDGHDDLFVSYWGDCSLWKNLGNGK FIDVAVKAGVTTRTAAGRKRNNTGCAFVDYDKDGHLDLFVSNYLEFDPKTAPLPESGPCKYKGLMVACGPPGLQGGKNIL FHNNGDGTFTDVSEKAGILKTPGTFGLGVAAFDFDNDGWPDIYVANDSTSSALYKNNHDGTFDEIAIESGVAYSADGKPQ AGMGVSVADYDCDGNFDLVKTNFAGDTTSLYRNLGKGMFEDQTFQAGLGKITRFLGWGVAFADVDNDGWADIVQCNGHVY PEVGETLAESGYRQRKVVYRNLRNGKFQEVSDQMGPGIMESVTGRGMAVGDFDNDGDLDLLVNCINDVPQLLRCDSRTKN HWIKIRTVGTNSNRSGIGARIYCSTGGPDKPHRQMDEVRSGSSYLSQSDLRVHFGLGDASSADLEIHWPSGVVDRLTAVA ADRVITVVEGQGEKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI47777317, Length=543, Percent_Identity=25.5985267034991, Blast_Score=90, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62467; Mature: 62467
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPGNRRTFIRSVCRTAAVFTLDQLLSGLDMDVQFVNVAREAGLRAKTIYGSEKRNRYLM CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEE ETTGCGAAFFDFDQDGWLDIFLVNGSRFEGGWTAANAPVSRLYKNNRDGTFQDVTMQAGI EECCCCEEEEECCCCCCEEEEEEECCEECCCEEECCCCHHHHHHCCCCCCEEEEEEECCC ARTGWGAGCCAGDFDNDGHDDLFVSYWGDCSLWKNLGNGKFIDVAVKAGVTTRTAAGRKR EECCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCEEEEEEECCCEEECCCCCCC NNTGCAFVDYDKDGHLDLFVSNYLEFDPKTAPLPESGPCKYKGLMVACGPPGLQGGKNIL CCCCEEEEEECCCCCEEEEEECHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEE FHNNGDGTFTDVSEKAGILKTPGTFGLGVAAFDFDNDGWPDIYVANDSTSSALYKNNHDG EEECCCCCEEEHHHCCCEEECCCCCCCEEEEEECCCCCCCEEEEECCCCCCCEEECCCCC TFDEIAIESGVAYSADGKPQAGMGVSVADYDCDGNFDLVKTNFAGDTTSLYRNLGKGMFE CHHHHHHHCCCEECCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCCCCC DQTFQAGLGKITRFLGWGVAFADVDNDGWADIVQCNGHVYPEVGETLAESGYRQRKVVYR CHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCEECHHHHHHHHHCCCHHHHHHHH NLRNGKFQEVSDQMGPGIMESVTGRGMAVGDFDNDGDLDLLVNCINDVPQLLRCDSRTKN HHCCCCHHHHHHHHCCCHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCC HWIKIRTVGTNSNRSGIGARIYCSTGGPDKPHRQMDEVRSGSSYLSQSDLRVHFGLGDAS CEEEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHCCCCCEEEEECCCCC SADLEIHWPSGVVDRLTAVAADRVITVVEGQGEKR CCCEEEECCCCHHHHHHHHHHCCEEEEEECCCCCC >Mature Secondary Structure MEPGNRRTFIRSVCRTAAVFTLDQLLSGLDMDVQFVNVAREAGLRAKTIYGSEKRNRYLM CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEE ETTGCGAAFFDFDQDGWLDIFLVNGSRFEGGWTAANAPVSRLYKNNRDGTFQDVTMQAGI EECCCCEEEEECCCCCCEEEEEEECCEECCCEEECCCCHHHHHHCCCCCCEEEEEEECCC ARTGWGAGCCAGDFDNDGHDDLFVSYWGDCSLWKNLGNGKFIDVAVKAGVTTRTAAGRKR EECCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCEEEEEEECCCEEECCCCCCC NNTGCAFVDYDKDGHLDLFVSNYLEFDPKTAPLPESGPCKYKGLMVACGPPGLQGGKNIL CCCCEEEEEECCCCCEEEEEECHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEE FHNNGDGTFTDVSEKAGILKTPGTFGLGVAAFDFDNDGWPDIYVANDSTSSALYKNNHDG EEECCCCCEEEHHHCCCEEECCCCCCCEEEEEECCCCCCCEEEEECCCCCCCEEECCCCC TFDEIAIESGVAYSADGKPQAGMGVSVADYDCDGNFDLVKTNFAGDTTSLYRNLGKGMFE CHHHHHHHCCCEECCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCCCCC DQTFQAGLGKITRFLGWGVAFADVDNDGWADIVQCNGHVYPEVGETLAESGYRQRKVVYR CHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCEECHHHHHHHHHCCCHHHHHHHH NLRNGKFQEVSDQMGPGIMESVTGRGMAVGDFDNDGDLDLLVNCINDVPQLLRCDSRTKN HHCCCCHHHHHHHHCCCHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCC HWIKIRTVGTNSNRSGIGARIYCSTGGPDKPHRQMDEVRSGSSYLSQSDLRVHFGLGDAS CEEEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHCCCCCEEEEECCCCC SADLEIHWPSGVVDRLTAVAADRVITVVEGQGEKR CCCEEEECCCCHHHHHHHHHHCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA