| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is fur [H]
Identifier: 116620976
GI number: 116620976
Start: 2312330
End: 2312854
Strand: Reverse
Name: fur [H]
Synonym: Acid_1857
Alternate gene names: 116620976
Gene position: 2312854-2312330 (Counterclockwise)
Preceding gene: 116620979
Following gene: 116620975
Centisome position: 23.21
GC content: 62.29
Gene sequence:
>525_bases ATGGCGCTCGACTCAATTGAAGGATCCCTGAAAGAGCGGGGCGTGCGTCTCACGCGCCAACGGCAGATATTGCTGGAGCT GATCGATACCACCGGCGAGCACCTGGATGCCGAGCGGCTCTACCAAATGGCGAAGGAAAAGGACCCGAAGCTCAACCGGG TCACTGTCTATCGCACCCTCAAGATGCTCAAGGCCGGCGGCTTGGTGGATGAGCTGGACCTCATGCACTACGGCGGTGAT CAGCACTACTACGAGACCCGGCTCAAACAGGAACATGCTCATGTGATCTGCCTCCGCTGCGGCAAGGTCGAAGAATTCTT CGGCGAACCGCTGCAGCGGCTGCGTAAACAGATCGAAAGCCACTTCGGATTTCAGGTGCTGCTGGCGCGCACCGAAGTCG GCGGGTACTGCGCCCACTGCCAGACGCTGCGCGCGCGGGAAGTTGAGGAGCTCCGGGTGTTGACGGCCGACGCCGCCAAG CCGCCGGCTACCAAATCGCGGCGCGCCCGAACCCGGCGAAGCTGA
Upstream 100 bases:
>100_bases GTTGGCGATCAAGACCTTACGGAACATGCAGAAGGAATTGTAGCAGCCGCCGCACGGCAGGGCCTCACTGGGCTAGAATT GAAAAGTCTCCGGAAGAACT
Downstream 100 bases:
>100_bases ATGGAACCGGAAGCCGCGATTGTTCCCACGGTAGGTCCGGCCTCGCTGGTCGTGGTGGACCCCAATGGACAAAAGAAGCG CGTGCCGCTGGACCAGAACC
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MALDSIEGSLKERGVRLTRQRQILLELIDTTGEHLDAERLYQMAKEKDPKLNRVTVYRTLKMLKAGGLVDELDLMHYGGD QHYYETRLKQEHAHVICLRCGKVEEFFGEPLQRLRKQIESHFGFQVLLARTEVGGYCAHCQTLRAREVEELRVLTADAAK PPATKSRRARTRRS
Sequences:
>Translated_174_residues MALDSIEGSLKERGVRLTRQRQILLELIDTTGEHLDAERLYQMAKEKDPKLNRVTVYRTLKMLKAGGLVDELDLMHYGGD QHYYETRLKQEHAHVICLRCGKVEEFFGEPLQRLRKQIESHFGFQVLLARTEVGGYCAHCQTLRAREVEELRVLTADAAK PPATKSRRARTRRS >Mature_173_residues ALDSIEGSLKERGVRLTRQRQILLELIDTTGEHLDAERLYQMAKEKDPKLNRVTVYRTLKMLKAGGLVDELDLMHYGGDQ HYYETRLKQEHAHVICLRCGKVEEFFGEPLQRLRKQIESHFGFQVLLARTEVGGYCAHCQTLRAREVEELRVLTADAAKP PATKSRRARTRRS
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulates genes involved in iron scavenging or photosynthetic electron transport [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=131, Percent_Identity=28.2442748091603, Blast_Score=61, Evalue=5e-11,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 20105; Mature: 19973
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: PS00283 SOYBEAN_KUNITZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDSIEGSLKERGVRLTRQRQILLELIDTTGEHLDAERLYQMAKEKDPKLNRVTVYRTL CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH KMLKAGGLVDELDLMHYGGDQHYYETRLKQEHAHVICLRCGKVEEFFGEPLQRLRKQIES HHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHH HFGFQVLLARTEVGGYCAHCQTLRAREVEELRVLTADAAKPPATKSRRARTRRS HCCHHHEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure ALDSIEGSLKERGVRLTRQRQILLELIDTTGEHLDAERLYQMAKEKDPKLNRVTVYRTL CCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH KMLKAGGLVDELDLMHYGGDQHYYETRLKQEHAHVICLRCGKVEEFFGEPLQRLRKQIES HHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHH HFGFQVLLARTEVGGYCAHCQTLRAREVEELRVLTADAAKPPATKSRRARTRRS HCCHHHEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8704986 [H]