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The map label for this gene is 116620979

Identifier: 116620979

GI number: 116620979

Start: 2314928

End: 2315878

Strand: Reverse

Name: 116620979

Synonym: Acid_1860

Alternate gene names: NA

Gene position: 2315878-2314928 (Counterclockwise)

Preceding gene: 116620980

Following gene: 116620976

Centisome position: 23.24

GC content: 63.93

Gene sequence:

>951_bases
GTGAAGCGGCGAATTTTCATTGGATCATCCACCGAGGGGCTGCCCCATGCGTGTCACATCAAGGAACTGCTGACCAGTTT
CGGCGACATCGAGCCTGTGCTGTGGACCGAGATTTTTCATCCCGGCCTGCTGACTTTCGAGGCGCTGGAGAACGTTCTGC
TGCGCTGCTGCGCGGCGGTGTTCGTGGCGAGCGCCGACGATGTCACCACGTTTCGCGGCCAATGCATCCACACTCCGCGG
GCCAACGTGATGCTGGAATTCGGGCTGGTGGCGGGCCGCATTGGGCGGCATAGTATCGCGCTCTGCCTGGCTGGCGGCGC
GCAATTGCCTTCAGACCTTCAGGGGCTGACGGTGATCGATATGAGCGTGACGGACCCGCCTCCGGTCCCCTCCTCGGAGG
CCTCGCTGCTGCCGCAGGACCGGCTGCGGCTGTGGACCACGGGGCTGCTCTCGACCGCGGACCAGATCGGGCGCACCGAC
ATTTTGCACGGCTACTCGGGGCGCTGGGAGTTCGCCCTGCAATTGAGCCACTGGCGTGGCAGGGAGGTGCGCTTTCCGAG
CTACGCCTACGTCAACGGCAATTTCGACCTGGTGATTTCACCGAACGGGCAAGCAGGGAAGGGCTTCGCGCAGGGGCGCT
TGAATTTCAAAATGGTCCTGGACGCCTCCGGGGAACATACGTTTCAAGGGGACTATCGCACGGCGCACGAGATCGCGAGC
GCCGATTGCAGCAGCGACGGGTCGCTGCATTTTACAAGCCAGGCCTTCGCGGTGGGAAAGTTCAGCCATATGGGCGTGGC
CCCGGCGGAACTATCGAGCCTGGACCTGGCGGAGCCCTGGTCGGCGCAATGGCAGCTGGCTCCCTCGGCAGAGCCGCGGT
CGCTGGAAGGCACGGTATCGACGGACGACGCGATCGGCACGCGAGGCACAGTCAAAGTTCGGAAGGCGTAA

Upstream 100 bases:

>100_bases
GCTCGGCGGAATCGCAGGCGATCGTGACACTCGAGAAATAGGTCTGGATCGCACGGAACCCGCCGCCGCCCGTGATGTAC
AATCCGTCATCGGAGTTCGC

Downstream 100 bases:

>100_bases
GCGTCCCTATTCGATGGTCGCCAGCAGCTCGCCGGCCGCCACGGTCGATCCCTCTTTCGCCGGAAGCGTGAGGACTGTGC
CCGCCCGGCTCGCCTTCATC

Product: nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MKRRIFIGSSTEGLPHACHIKELLTSFGDIEPVLWTEIFHPGLLTFEALENVLLRCCAAVFVASADDVTTFRGQCIHTPR
ANVMLEFGLVAGRIGRHSIALCLAGGAQLPSDLQGLTVIDMSVTDPPPVPSSEASLLPQDRLRLWTTGLLSTADQIGRTD
ILHGYSGRWEFALQLSHWRGREVRFPSYAYVNGNFDLVISPNGQAGKGFAQGRLNFKMVLDASGEHTFQGDYRTAHEIAS
ADCSSDGSLHFTSQAFAVGKFSHMGVAPAELSSLDLAEPWSAQWQLAPSAEPRSLEGTVSTDDAIGTRGTVKVRKA

Sequences:

>Translated_316_residues
MKRRIFIGSSTEGLPHACHIKELLTSFGDIEPVLWTEIFHPGLLTFEALENVLLRCCAAVFVASADDVTTFRGQCIHTPR
ANVMLEFGLVAGRIGRHSIALCLAGGAQLPSDLQGLTVIDMSVTDPPPVPSSEASLLPQDRLRLWTTGLLSTADQIGRTD
ILHGYSGRWEFALQLSHWRGREVRFPSYAYVNGNFDLVISPNGQAGKGFAQGRLNFKMVLDASGEHTFQGDYRTAHEIAS
ADCSSDGSLHFTSQAFAVGKFSHMGVAPAELSSLDLAEPWSAQWQLAPSAEPRSLEGTVSTDDAIGTRGTVKVRKA
>Mature_316_residues
MKRRIFIGSSTEGLPHACHIKELLTSFGDIEPVLWTEIFHPGLLTFEALENVLLRCCAAVFVASADDVTTFRGQCIHTPR
ANVMLEFGLVAGRIGRHSIALCLAGGAQLPSDLQGLTVIDMSVTDPPPVPSSEASLLPQDRLRLWTTGLLSTADQIGRTD
ILHGYSGRWEFALQLSHWRGREVRFPSYAYVNGNFDLVISPNGQAGKGFAQGRLNFKMVLDASGEHTFQGDYRTAHEIAS
ADCSSDGSLHFTSQAFAVGKFSHMGVAPAELSSLDLAEPWSAQWQLAPSAEPRSLEGTVSTDDAIGTRGTVKVRKA

Specific function: Unknown

COG id: COG4271

COG function: function code K; Predicted nucleotide-binding protein containing TIR -like domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34223; Mature: 34223

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRIFIGSSTEGLPHACHIKELLTSFGDIEPVLWTEIFHPGLLTFEALENVLLRCCAAV
CCCEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHH
FVASADDVTTFRGQCIHTPRANVMLEFGLVAGRIGRHSIALCLAGGAQLPSDLQGLTVID
HHCCCCCCEECCCEEEECCCCCEEEEECHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEE
MSVTDPPPVPSSEASLLPQDRLRLWTTGLLSTADQIGRTDILHGYSGRWEFALQLSHWRG
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEEECCCC
REVRFPSYAYVNGNFDLVISPNGQAGKGFAQGRLNFKMVLDASGEHTFQGDYRTAHEIAS
CEEECCCEEEECCCEEEEECCCCCCCCCEECCCEEEEEEEECCCCCEECCCCHHHHHHHH
ADCSSDGSLHFTSQAFAVGKFSHMGVAPAELSSLDLAEPWSAQWQLAPSAEPRSLEGTVS
CCCCCCCCEEEECCEEEEECHHCCCCCHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCC
TDDAIGTRGTVKVRKA
CCCCCCCCCEEEEECC
>Mature Secondary Structure
MKRRIFIGSSTEGLPHACHIKELLTSFGDIEPVLWTEIFHPGLLTFEALENVLLRCCAAV
CCCEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHH
FVASADDVTTFRGQCIHTPRANVMLEFGLVAGRIGRHSIALCLAGGAQLPSDLQGLTVID
HHCCCCCCEECCCEEEECCCCCEEEEECHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEE
MSVTDPPPVPSSEASLLPQDRLRLWTTGLLSTADQIGRTDILHGYSGRWEFALQLSHWRG
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEEECCCC
REVRFPSYAYVNGNFDLVISPNGQAGKGFAQGRLNFKMVLDASGEHTFQGDYRTAHEIAS
CEEECCCEEEECCCEEEEECCCCCCCCCEECCCEEEEEEEECCCCCEECCCCHHHHHHHH
ADCSSDGSLHFTSQAFAVGKFSHMGVAPAELSSLDLAEPWSAQWQLAPSAEPRSLEGTVS
CCCCCCCCEEEECCEEEEECHHCCCCCHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCC
TDDAIGTRGTVKVRKA
CCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA