| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620969
Identifier: 116620969
GI number: 116620969
Start: 2301957
End: 2304047
Strand: Direct
Name: 116620969
Synonym: Acid_1850
Alternate gene names: NA
Gene position: 2301957-2304047 (Clockwise)
Preceding gene: 116620968
Following gene: 116620970
Centisome position: 23.1
GC content: 63.99
Gene sequence:
>2091_bases ATGACCCGACTATCTGCAATTCTGGCTTCGGCCTTGCTCGCGTGCGCGATAGCGCCCGCGGCGACCATCAGTACAACCAT GACCGTGAAGGGCAGCGGCGCCCTCACGGGAACGACCTTTACAGGAACCGCCGACCTCACGGGCATCGGGACGAATCTCG CGTTGACCGGGACGTTCGCCGCATCCACGTCGTCGCCCGGCAGCTACAACGCGATTTTCGTGATCAGCGTGAACAGCACC GATAAGCTGAACGTCAACATCACGATTCCGGCGGCAATCCTGCTCGGCAGCGCGACAGCAAGCGGCCAGATCACCGGTGG TTCGGGTGCATATGCCGGTGCGACGGGATCCTTTCCGAGTATGCCTGGCACCGGTGCCATCAGCGGTACGAGCCTAACGC TCAGCTTTTCGGGCGCAGGCACCATTGTCACCGGCGGAACCCCGCCTGCCCCGGTGCCCACCATCACCGCCGTCCAGGAT GCGGCCAGCAACACGCCCGGCATCGCGCAGGGCAGCATCTTCATCGTCAAGGGCACCACTCTTTCGCCGAGCGGCTTCAC TTCCTACGCCCCGCCGCGCCCCACCCAGCCGAGCGGCGTTAAAGTCACCTTCACGCCGACCGCCGGCGGCACCGGCACCG ACGCGTACATCGTCTACCTGTACAACCAGGGCGGCGTCAACCAGATTGCAGCCATCTTGCCTTCGAATCTGGCGGCAGGC AACTACAATGTGACGGTCACCAACGGCACCGTCAGCGCACCGTTCGCCGCGCAGGTGGTAACCAGCAAGATCGGCCTGTT CACGCAGGATTCGAGCGGCACCGGCCTGGCGTCAGTCCAGAATTACATTTCCGCGGGCGTGGTGGATTTGAATCGCCTGA CCACCGGCTCCGTCAGCGGCATCACGATTTCTCCGGCCAAGCCCGGCCAGCCCGTGATCGCATACGGCACCGGCCTCGGC GCGTACATCGCAGGTGACAACTCGGCTTCGCCGGTGTTCGACTTCCGCGCCAGCGCGACCATTCAGGCCGTGGTCGGCGG TGTCTCGATCCCGGTGGACTACGCGGGACGCGCGGGTTACGCCGGTGAGGATCAGATCAACTTCACGTTGCCCGCCAACA TTCCGACCGGCTGCTCCGTATCGCTGCAGATTTCGGTCAACGGCAAACTCAGCCCTGCTACTTCCATCGCGATCGCGCCC GACGCCAATTCGAGCGCTTGCGTGATCCCCGGTTACACCACCTCGCAGCTGCAGAAGTTGGACCAGGGCGGCACCATTAC GGCCGGCGGGTTCGCGATCACGCAGTTTGCGATCACGGTGCCGCAGATCGGCAACGTGAAATCGAACTCGGTTTCCGGAG GCTTCACCAAGCTTACGGGCTTCCAACTGTCCTCGGCCGCCCAAGCCAACGTCAGCGTGATTCAGCAGGGCAGTTGCCAG GTGATTACGTCCAGTGGTGGCAGCGGCACGACCGCCGGTGGTAGCCTGACCTACCTGGATGCCGGCAACGTCACGGTGAC CGGACCGGCCGGTTCCAGCCTTACCAACACGCCACTCAACAAATCGACAGATTTCAGCTATTCCTTGTCATCCACGGAAG GCTTCGCCATTCCGGGCCAGGCGAGCTTCAGTCTGCCGGCCGGCACGTACAGTTTGGCAGGTGCGGGCGGCAATGATGTC GGCACGTTCAACACGTCGATCTCGGTTGGCAGCCCGCTCGCCGTTACGGGCGGCTTGCCCTCCTCGGTCACGCGCAGCAA CGCCCTGACGCTCAACTGGACCGGCGGCAATGCGTCCGATCTGGTGGAGATCGTCGGCGGTTCTTCCACCAGCACCGGGA CCGGGACCAACGTCGTCACCACCAGCACCACCTTCATCTGCCTCACCACCGCCGGGCAGAAGACGTTCACCGTGCCCGCG TCGATTCTCCAACAGCTGCCGGCCACCAGCGGTACCAACACGGGGATCCTGGAAGTGGCATCCGGCACCGTTGGGCCCAA CTTCAGTGCTTCGCTGAAGGCGGGCGGCTCGATTGACGCAGGGACCTTCTCCAGCTTCGTCGGCACCGGCGCCACCGTTA CCTGGCAGTAG
Upstream 100 bases:
>100_bases TGAAGTCACGATGCCGGACCGGGGCCGGCGGGTCATTTTCTTTTGACCCGGTTTCCCCCGATTTGCTGCGTTTCTAGAGT GGAGGACTCTTAACACACCC
Downstream 100 bases:
>100_bases ACGTTTCACCCTCAAAAGACGCACTTCTTCCTCCCGGTATACTGGGGAAGAAGTGCGTTTTCCTTTTCGTGTGGGCTGGA ACAGTACGGCGTCATACGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 696; Mature: 695
Protein sequence:
>696_residues MTRLSAILASALLACAIAPAATISTTMTVKGSGALTGTTFTGTADLTGIGTNLALTGTFAASTSSPGSYNAIFVISVNST DKLNVNITIPAAILLGSATASGQITGGSGAYAGATGSFPSMPGTGAISGTSLTLSFSGAGTIVTGGTPPAPVPTITAVQD AASNTPGIAQGSIFIVKGTTLSPSGFTSYAPPRPTQPSGVKVTFTPTAGGTGTDAYIVYLYNQGGVNQIAAILPSNLAAG NYNVTVTNGTVSAPFAAQVVTSKIGLFTQDSSGTGLASVQNYISAGVVDLNRLTTGSVSGITISPAKPGQPVIAYGTGLG AYIAGDNSASPVFDFRASATIQAVVGGVSIPVDYAGRAGYAGEDQINFTLPANIPTGCSVSLQISVNGKLSPATSIAIAP DANSSACVIPGYTTSQLQKLDQGGTITAGGFAITQFAITVPQIGNVKSNSVSGGFTKLTGFQLSSAAQANVSVIQQGSCQ VITSSGGSGTTAGGSLTYLDAGNVTVTGPAGSSLTNTPLNKSTDFSYSLSSTEGFAIPGQASFSLPAGTYSLAGAGGNDV GTFNTSISVGSPLAVTGGLPSSVTRSNALTLNWTGGNASDLVEIVGGSSTSTGTGTNVVTTSTTFICLTTAGQKTFTVPA SILQQLPATSGTNTGILEVASGTVGPNFSASLKAGGSIDAGTFSSFVGTGATVTWQ
Sequences:
>Translated_696_residues MTRLSAILASALLACAIAPAATISTTMTVKGSGALTGTTFTGTADLTGIGTNLALTGTFAASTSSPGSYNAIFVISVNST DKLNVNITIPAAILLGSATASGQITGGSGAYAGATGSFPSMPGTGAISGTSLTLSFSGAGTIVTGGTPPAPVPTITAVQD AASNTPGIAQGSIFIVKGTTLSPSGFTSYAPPRPTQPSGVKVTFTPTAGGTGTDAYIVYLYNQGGVNQIAAILPSNLAAG NYNVTVTNGTVSAPFAAQVVTSKIGLFTQDSSGTGLASVQNYISAGVVDLNRLTTGSVSGITISPAKPGQPVIAYGTGLG AYIAGDNSASPVFDFRASATIQAVVGGVSIPVDYAGRAGYAGEDQINFTLPANIPTGCSVSLQISVNGKLSPATSIAIAP DANSSACVIPGYTTSQLQKLDQGGTITAGGFAITQFAITVPQIGNVKSNSVSGGFTKLTGFQLSSAAQANVSVIQQGSCQ VITSSGGSGTTAGGSLTYLDAGNVTVTGPAGSSLTNTPLNKSTDFSYSLSSTEGFAIPGQASFSLPAGTYSLAGAGGNDV GTFNTSISVGSPLAVTGGLPSSVTRSNALTLNWTGGNASDLVEIVGGSSTSTGTGTNVVTTSTTFICLTTAGQKTFTVPA SILQQLPATSGTNTGILEVASGTVGPNFSASLKAGGSIDAGTFSSFVGTGATVTWQ >Mature_695_residues TRLSAILASALLACAIAPAATISTTMTVKGSGALTGTTFTGTADLTGIGTNLALTGTFAASTSSPGSYNAIFVISVNSTD KLNVNITIPAAILLGSATASGQITGGSGAYAGATGSFPSMPGTGAISGTSLTLSFSGAGTIVTGGTPPAPVPTITAVQDA ASNTPGIAQGSIFIVKGTTLSPSGFTSYAPPRPTQPSGVKVTFTPTAGGTGTDAYIVYLYNQGGVNQIAAILPSNLAAGN YNVTVTNGTVSAPFAAQVVTSKIGLFTQDSSGTGLASVQNYISAGVVDLNRLTTGSVSGITISPAKPGQPVIAYGTGLGA YIAGDNSASPVFDFRASATIQAVVGGVSIPVDYAGRAGYAGEDQINFTLPANIPTGCSVSLQISVNGKLSPATSIAIAPD ANSSACVIPGYTTSQLQKLDQGGTITAGGFAITQFAITVPQIGNVKSNSVSGGFTKLTGFQLSSAAQANVSVIQQGSCQV ITSSGGSGTTAGGSLTYLDAGNVTVTGPAGSSLTNTPLNKSTDFSYSLSSTEGFAIPGQASFSLPAGTYSLAGAGGNDVG TFNTSISVGSPLAVTGGLPSSVTRSNALTLNWTGGNASDLVEIVGGSSTSTGTGTNVVTTSTTFICLTTAGQKTFTVPAS ILQQLPATSGTNTGILEVASGTVGPNFSASLKAGGSIDAGTFSSFVGTGATVTWQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68012; Mature: 67881
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLSAILASALLACAIAPAATISTTMTVKGSGALTGTTFTGTADLTGIGTNLALTGTFA CCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEECCCCEEECCCCEEEEEEEE ASTSSPGSYNAIFVISVNSTDKLNVNITIPAAILLGSATASGQITGGSGAYAGATGSFPS ECCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCC MPGTGAISGTSLTLSFSGAGTIVTGGTPPAPVPTITAVQDAASNTPGIAQGSIFIVKGTT CCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCEEEEEHHHCCCCCCCCCCEEEEEECCE LSPSGFTSYAPPRPTQPSGVKVTFTPTAGGTGTDAYIVYLYNQGGVNQIAAILPSNLAAG ECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCC NYNVTVTNGTVSAPFAAQVVTSKIGLFTQDSSGTGLASVQNYISAGVVDLNRLTTGSVSG CEEEEEECCEECCCHHHHHHHHHCEEEEECCCCCCHHHHHHHHHCCEEEEEEECCCCCCC ITISPAKPGQPVIAYGTGLGAYIAGDNSASPVFDFRASATIQAVVGGVSIPVDYAGRAGY EEECCCCCCCCEEEEECCCEEEEECCCCCCCEEEEECCCEEEEEECCEEECEECCCCCCC AGEDQINFTLPANIPTGCSVSLQISVNGKLSPATSIAIAPDANSSACVIPGYTTSQLQKL CCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHH DQGGTITAGGFAITQFAITVPQIGNVKSNSVSGGFTKLTGFQLSSAAQANVSVIQQGSCQ CCCCCEEECCEEEEEEEEECCCCCCCCCCCCCCCEEEEECEEECCCCCCCEEEEECCCEE VITSSGGSGTTAGGSLTYLDAGNVTVTGPAGSSLTNTPLNKSTDFSYSLSSTEGFAIPGQ EEEECCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEECCCC ASFSLPAGTYSLAGAGGNDVGTFNTSISVGSPLAVTGGLPSSVTRSNALTLNWTGGNASD CCEECCCCCEEEECCCCCCCEEEECEEECCCCEEEECCCCCCCCCCCEEEEEECCCCHHH LVEIVGGSSTSTGTGTNVVTTSTTFICLTTAGQKTFTVPASILQQLPATSGTNTGILEVA HHEEECCCCCCCCCCCEEEEECEEEEEEEECCCEEEECHHHHHHHCCCCCCCCCCEEEEE SGTVGPNFSASLKAGGSIDAGTFSSFVGTGATVTWQ CCCCCCCCCEEECCCCCCCCCCHHHHHCCCEEEEEC >Mature Secondary Structure TRLSAILASALLACAIAPAATISTTMTVKGSGALTGTTFTGTADLTGIGTNLALTGTFA CHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEECCCCEEECCCCEEEEEEEE ASTSSPGSYNAIFVISVNSTDKLNVNITIPAAILLGSATASGQITGGSGAYAGATGSFPS ECCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCC MPGTGAISGTSLTLSFSGAGTIVTGGTPPAPVPTITAVQDAASNTPGIAQGSIFIVKGTT CCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCEEEEEHHHCCCCCCCCCCEEEEEECCE LSPSGFTSYAPPRPTQPSGVKVTFTPTAGGTGTDAYIVYLYNQGGVNQIAAILPSNLAAG ECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCC NYNVTVTNGTVSAPFAAQVVTSKIGLFTQDSSGTGLASVQNYISAGVVDLNRLTTGSVSG CEEEEEECCEECCCHHHHHHHHHCEEEEECCCCCCHHHHHHHHHCCEEEEEEECCCCCCC ITISPAKPGQPVIAYGTGLGAYIAGDNSASPVFDFRASATIQAVVGGVSIPVDYAGRAGY EEECCCCCCCCEEEEECCCEEEEECCCCCCCEEEEECCCEEEEEECCEEECEECCCCCCC AGEDQINFTLPANIPTGCSVSLQISVNGKLSPATSIAIAPDANSSACVIPGYTTSQLQKL CCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHH DQGGTITAGGFAITQFAITVPQIGNVKSNSVSGGFTKLTGFQLSSAAQANVSVIQQGSCQ CCCCCEEECCEEEEEEEEECCCCCCCCCCCCCCCEEEEECEEECCCCCCCEEEEECCCEE VITSSGGSGTTAGGSLTYLDAGNVTVTGPAGSSLTNTPLNKSTDFSYSLSSTEGFAIPGQ EEEECCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEECCCC ASFSLPAGTYSLAGAGGNDVGTFNTSISVGSPLAVTGGLPSSVTRSNALTLNWTGGNASD CCEECCCCCEEEECCCCCCCEEEECEEECCCCEEEECCCCCCCCCCCEEEEEECCCCHHH LVEIVGGSSTSTGTGTNVVTTSTTFICLTTAGQKTFTVPASILQQLPATSGTNTGILEVA HHEEECCCCCCCCCCCEEEEECEEEEEEEECCCEEEECHHHHHHHCCCCCCCCCCEEEEE SGTVGPNFSASLKAGGSIDAGTFSSFVGTGATVTWQ CCCCCCCCCEEECCCCCCCCCCHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA