| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is steT [H]
Identifier: 116620941
GI number: 116620941
Start: 2266774
End: 2268168
Strand: Reverse
Name: steT [H]
Synonym: Acid_1822
Alternate gene names: 116620941
Gene position: 2268168-2266774 (Counterclockwise)
Preceding gene: 116620942
Following gene: 116620940
Centisome position: 22.76
GC content: 63.44
Gene sequence:
>1395_bases ATGCCATCTCCTAAATCGCAGGACTCACGGCCCGGCTTGCTGCGGCAAATCGGGTTCTTCAGTGCCACCGCGCTGGTGAT CTCCAACATGGTGGGTACTGGCATTTTCGCGACCACCGGTTTTATGGCGGGCGACCTGGGGAGCGCGCGGCTGATCCTGG CGTGCTGGACCGTGGGCGCGCTGTTCGCGCTTGCGGGCGCGCTCAGCTATTCCGAGCTCGGCATCAACTTTCCCAGTTCG GGCGGGGAGTACGTATATCTCACGCACGCCTTCGGCCCCGAATGGGGCTTCATGACCGGATGGGTCTCTTTCTTTGCCGG CTTCTCCGCTCCCATAGCGGCGGCGGCGCTGGCCTTCTCGGATTACCTCGGTTATTTCTTCCCGTTGCTGAAACAGGCGA ACGCATCCATCGTGATCGGCACCGGCACGCTCTCGCTGCGGCTGGGCCGGGGGCAGATGGTAGCGTCGGCGCTGATCGCC GCGTTCACGATCCTCAACTGCCTGGGAGTGGGCCGGACTGCGAAGGTGCAAAACGTGCTCACCAGCACCAAGCTGATTGT GATCGCGGGTTTCGTGATTTTGGGCTTCGCCGCCGGTACGGGCGACTGGCGCCATTTCTCCGAGCACGCGGTGCGGACGT CCACCGTCAGCCTGCCGACCCAGTTCATGATCAGCCTGCTGTGGGTGATGGTCGGGTACAGCGGCTGGAATGCCGCCACA TACGTGGCCGAGGAAGTGCGCAGGCCGGAACGGACGCTGCCGGCCGCGATCGCAGTGGGCAGCCTGATTGTCGCGGTGCT GTACCTGGGCCTCAACCTGGTTTTTATCTACGCAACCCCGCTAGAGCAGATGAAGGGCGTGATCGCGGTCGGCACGCTCT CGGCGTCTAACCTTTTCGGACCAGGCGTGGCCGGCGTGTTTTCCGCGCTCATGGCCGTCTCAATTGTCTCCACCGTGAAC GCGATGGTGACGATCGGCCCGCGCGTGTATTACGCGATGGCGAAGAACCGCGCGTTCTTCAGCGCGGCGGCGCGCGTGGA TCCGCGCTGGCACACGCCGGTCTACGCAATCCTCAGCCAGGGGCTCTGCGCCATGCTGATGACGCTGACTCCCTTCCCGC AGCTGGTGGTGTACATCGGCTTCAGCCTCACGCTTTTCACGGTGCTCTCCGTCGCCTCCATCTTTATCTTCCGCCGGAGG CGCCGGGACTGGCAGAGGTTACGCGCCCTGGAATTCGCGTGGCCATTGATCCCCGCATCGTATATTCTGGTTGGGACCTG CATGATGGCTTACGGCGTGATTTGGCAACCGCGCGCGTCACTGACCGCGCTGGCCACCGTCGGCGCCGGTGCGTTGGTTT ATCGTTTCGGAGTTCACGTGCCGAAGGTTCGATAG
Upstream 100 bases:
>100_bases GTCCCAAGGCATTGTGGAGGCGCTGAAGAAGGTCTATCATGCACCGGACTTGCTGAAAGAACTGGGCATGCCTGTCCTAC AATGAATCCAGGTCTCGGGA
Downstream 100 bases:
>100_bases CGCGGAATTGAGAGAGGGTGCTCATGTTTTCGAGAAGGGACTTCGGGAGAATCGCACTGTCGGCGATTCCACTGGCAGCC GCGCGCGGCGCAATGATCGA
Product: amino acid permease-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MPSPKSQDSRPGLLRQIGFFSATALVISNMVGTGIFATTGFMAGDLGSARLILACWTVGALFALAGALSYSELGINFPSS GGEYVYLTHAFGPEWGFMTGWVSFFAGFSAPIAAAALAFSDYLGYFFPLLKQANASIVIGTGTLSLRLGRGQMVASALIA AFTILNCLGVGRTAKVQNVLTSTKLIVIAGFVILGFAAGTGDWRHFSEHAVRTSTVSLPTQFMISLLWVMVGYSGWNAAT YVAEEVRRPERTLPAAIAVGSLIVAVLYLGLNLVFIYATPLEQMKGVIAVGTLSASNLFGPGVAGVFSALMAVSIVSTVN AMVTIGPRVYYAMAKNRAFFSAAARVDPRWHTPVYAILSQGLCAMLMTLTPFPQLVVYIGFSLTLFTVLSVASIFIFRRR RRDWQRLRALEFAWPLIPASYILVGTCMMAYGVIWQPRASLTALATVGAGALVYRFGVHVPKVR
Sequences:
>Translated_464_residues MPSPKSQDSRPGLLRQIGFFSATALVISNMVGTGIFATTGFMAGDLGSARLILACWTVGALFALAGALSYSELGINFPSS GGEYVYLTHAFGPEWGFMTGWVSFFAGFSAPIAAAALAFSDYLGYFFPLLKQANASIVIGTGTLSLRLGRGQMVASALIA AFTILNCLGVGRTAKVQNVLTSTKLIVIAGFVILGFAAGTGDWRHFSEHAVRTSTVSLPTQFMISLLWVMVGYSGWNAAT YVAEEVRRPERTLPAAIAVGSLIVAVLYLGLNLVFIYATPLEQMKGVIAVGTLSASNLFGPGVAGVFSALMAVSIVSTVN AMVTIGPRVYYAMAKNRAFFSAAARVDPRWHTPVYAILSQGLCAMLMTLTPFPQLVVYIGFSLTLFTVLSVASIFIFRRR RRDWQRLRALEFAWPLIPASYILVGTCMMAYGVIWQPRASLTALATVGAGALVYRFGVHVPKVR >Mature_463_residues PSPKSQDSRPGLLRQIGFFSATALVISNMVGTGIFATTGFMAGDLGSARLILACWTVGALFALAGALSYSELGINFPSSG GEYVYLTHAFGPEWGFMTGWVSFFAGFSAPIAAAALAFSDYLGYFFPLLKQANASIVIGTGTLSLRLGRGQMVASALIAA FTILNCLGVGRTAKVQNVLTSTKLIVIAGFVILGFAAGTGDWRHFSEHAVRTSTVSLPTQFMISLLWVMVGYSGWNAATY VAEEVRRPERTLPAAIAVGSLIVAVLYLGLNLVFIYATPLEQMKGVIAVGTLSASNLFGPGVAGVFSALMAVSIVSTVNA MVTIGPRVYYAMAKNRAFFSAAARVDPRWHTPVYAILSQGLCAMLMTLTPFPQLVVYIGFSLTLFTVLSVASIFIFRRRR RDWQRLRALEFAWPLIPASYILVGTCMMAYGVIWQPRASLTALATVGAGALVYRFGVHVPKVR
Specific function: Exhibits an obligate exchange activity for serine, threonine and aromatic amino acids [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. L-type amino acid transporter (LAT) (TC 2.A.3.8) family [H]
Homologues:
Organism=Homo sapiens, GI33286428, Length=461, Percent_Identity=27.3318872017354, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI186910308, Length=477, Percent_Identity=26.6247379454927, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI186910306, Length=477, Percent_Identity=26.6247379454927, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI186910304, Length=477, Percent_Identity=26.6247379454927, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI115648063, Length=463, Percent_Identity=24.8380129589633, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI115648022, Length=463, Percent_Identity=24.8380129589633, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI187423910, Length=409, Percent_Identity=24.9388753056235, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI7657591, Length=409, Percent_Identity=24.9388753056235, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI7657683, Length=397, Percent_Identity=27.455919395466, Blast_Score=119, Evalue=9e-27, Organism=Homo sapiens, GI71979932, Length=462, Percent_Identity=24.8917748917749, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI9790235, Length=464, Percent_Identity=26.2931034482759, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI71999149, Length=406, Percent_Identity=23.6453201970443, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI258614003, Length=395, Percent_Identity=24.8101265822785, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI258614005, Length=395, Percent_Identity=24.8101265822785, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI4507047, Length=437, Percent_Identity=24.7139588100687, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI33286430, Length=238, Percent_Identity=28.1512605042017, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI114326544, Length=395, Percent_Identity=23.0379746835443, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI114326550, Length=395, Percent_Identity=23.0379746835443, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI258645169, Length=391, Percent_Identity=24.0409207161125, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI110347453, Length=368, Percent_Identity=25.8152173913043, Blast_Score=69, Evalue=7e-12, Organism=Escherichia coli, GI87082250, Length=407, Percent_Identity=27.027027027027, Blast_Score=123, Evalue=3e-29, Organism=Escherichia coli, GI2367353, Length=255, Percent_Identity=27.0588235294118, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1786908, Length=404, Percent_Identity=25.7425742574257, Blast_Score=62, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17540018, Length=422, Percent_Identity=25.8293838862559, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI71993915, Length=397, Percent_Identity=26.1964735516373, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17568033, Length=431, Percent_Identity=25.5220417633411, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI193208714, Length=440, Percent_Identity=24.7727272727273, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI32566695, Length=440, Percent_Identity=24.7727272727273, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71982612, Length=394, Percent_Identity=23.6040609137056, Blast_Score=108, Evalue=9e-24, Organism=Caenorhabditis elegans, GI71982608, Length=394, Percent_Identity=23.6040609137056, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI32566699, Length=357, Percent_Identity=24.6498599439776, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71995382, Length=400, Percent_Identity=25.25, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI71995388, Length=400, Percent_Identity=25.25, Blast_Score=102, Evalue=6e-22, Organism=Caenorhabditis elegans, GI71990446, Length=386, Percent_Identity=25.6476683937824, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI71982623, Length=288, Percent_Identity=25, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17532491, Length=415, Percent_Identity=24.578313253012, Blast_Score=68, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6321492, Length=281, Percent_Identity=28.4697508896797, Blast_Score=81, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6321751, Length=429, Percent_Identity=25.8741258741259, Blast_Score=80, Evalue=8e-16, Organism=Drosophila melanogaster, GI221331183, Length=466, Percent_Identity=27.6824034334764, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI17647653, Length=466, Percent_Identity=27.6824034334764, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI24664379, Length=466, Percent_Identity=27.6824034334764, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI24651635, Length=372, Percent_Identity=27.1505376344086, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI24651633, Length=372, Percent_Identity=27.1505376344086, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI45550968, Length=423, Percent_Identity=26.4775413711584, Blast_Score=132, Evalue=5e-31, Organism=Drosophila melanogaster, GI19921172, Length=423, Percent_Identity=26.4775413711584, Blast_Score=132, Evalue=5e-31, Organism=Drosophila melanogaster, GI21357367, Length=467, Percent_Identity=24.4111349036403, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24641995, Length=410, Percent_Identity=25.8536585365854, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24641993, Length=410, Percent_Identity=25.8536585365854, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24667468, Length=414, Percent_Identity=24.1545893719807, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 49694; Mature: 49563
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPKSQDSRPGLLRQIGFFSATALVISNMVGTGIFATTGFMAGDLGSARLILACWTVGA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHCCCCCHHHHHHHHHHHH LFALAGALSYSELGINFPSSGGEYVYLTHAFGPEWGFMTGWVSFFAGFSAPIAAAALAFS HHHHHHHCCHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH DYLGYFFPLLKQANASIVIGTGTLSLRLGRGQMVASALIAAFTILNCLGVGRTAKVQNVL HHHHHHHHHHHCCCCCEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH TSTKLIVIAGFVILGFAAGTGDWRHFSEHAVRTSTVSLPTQFMISLLWVMVGYSGWNAAT HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHH YVAEEVRRPERTLPAAIAVGSLIVAVLYLGLNLVFIYATPLEQMKGVIAVGTLSASNLFG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHCCCEEEEEEECCCCCCC PGVAGVFSALMAVSIVSTVNAMVTIGPRVYYAMAKNRAFFSAAARVDPRWHTPVYAILSQ CCHHHHHHHHHHHHHHHHHHHHEEECCHHEEHHHHCCHHHHHHHCCCCCCCCHHHHHHHH GLCAMLMTLTPFPQLVVYIGFSLTLFTVLSVASIFIFRRRRRDWQRLRALEFAWPLIPAS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YILVGTCMMAYGVIWQPRASLTALATVGAGALVYRFGVHVPKVR HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCC >Mature Secondary Structure PSPKSQDSRPGLLRQIGFFSATALVISNMVGTGIFATTGFMAGDLGSARLILACWTVGA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHCCCCCHHHHHHHHHHHH LFALAGALSYSELGINFPSSGGEYVYLTHAFGPEWGFMTGWVSFFAGFSAPIAAAALAFS HHHHHHHCCHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH DYLGYFFPLLKQANASIVIGTGTLSLRLGRGQMVASALIAAFTILNCLGVGRTAKVQNVL HHHHHHHHHHHCCCCCEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH TSTKLIVIAGFVILGFAAGTGDWRHFSEHAVRTSTVSLPTQFMISLLWVMVGYSGWNAAT HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHH YVAEEVRRPERTLPAAIAVGSLIVAVLYLGLNLVFIYATPLEQMKGVIAVGTLSASNLFG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHCCCEEEEEEECCCCCCC PGVAGVFSALMAVSIVSTVNAMVTIGPRVYYAMAKNRAFFSAAARVDPRWHTPVYAILSQ CCHHHHHHHHHHHHHHHHHHHHEEECCHHEEHHHHCCHHHHHHHCCCCCCCCHHHHHHHH GLCAMLMTLTPFPQLVVYIGFSLTLFTVLSVASIFIFRRRRRDWQRLRALEFAWPLIPAS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YILVGTCMMAYGVIWQPRASLTALATVGAGALVYRFGVHVPKVR HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]