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The map label for this gene is 116620940

Identifier: 116620940

GI number: 116620940

Start: 2265893

End: 2266750

Strand: Reverse

Name: 116620940

Synonym: Acid_1821

Alternate gene names: NA

Gene position: 2266750-2265893 (Counterclockwise)

Preceding gene: 116620941

Following gene: 116620939

Centisome position: 22.75

GC content: 57.81

Gene sequence:

>858_bases
ATGTTTTCGAGAAGGGACTTCGGGAGAATCGCACTGTCGGCGATTCCACTGGCAGCCGCGCGCGGCGCAATGATCGATTC
CAGGGTCAGCGGGGTCCAGATCGGTGCACAATCATACAGTTTCCGCGACCGGCCGATGGAGAAGGCGATCGAGGCCTGCA
AAGAAGTCGGGCTGGGTGAATGCGAACTCTGGCAGGGCCACGTCGAGCCGAATCCCAGCGGACCGGACGCGCGCGAAGAA
CTTCGCAAGTGGCGATTGGAGACGCCGCTCGATCACTTCGCCACGATCCGCAAGCAGTGGAACGATGCCGGGATCGTGTT
GTACGCCTACAACCTGAGCTTCAACGACAGTTTCACGGACGCGGAAATCGATCGCGGATTCGAGATCGCGAGGGCCATGG
GGGTAAAGGTGCTGACCGCATCCTCCACGGTCAGCGCGGCGAAGAAGGTAGCGCCGTTTGCGGACCGGCACAAGATTCAG
GTCGCGATGCACGGTCACGACAACTTGAGCGACCCCAATCAGTTCGCCAAGCCGGAAAGTTTCGAGGCCGCCTTGCGGAT
GTCGAAGTATTTCATGATCAATCTCGACATCGGGCATTTCACTTCGGCGGGCTATGACCCGGTGGAGTATCTGAAGCAGC
ACCACGACCGCATCGTGGACCTGCACATTAAAGATCGCAACAAGAAGCACGATAATCTCCCGTTCGGCCAGGGTGAAACG
CCCATCAAGGAAGTCCTGCTGCTGCTCAGCCGCAATAAGTGGAAGATACCGGCCAACATCGAGTACGAGTACAAGGGCAA
CAACGCGGTCGCCGAAGTCAGCAAGTGTTACCAATACATGAAAGCAGCATTGGCTTAA

Upstream 100 bases:

>100_bases
CACTGACCGCGCTGGCCACCGTCGGCGCCGGTGCGTTGGTTTATCGTTTCGGAGTTCACGTGCCGAAGGTTCGATAGCGC
GGAATTGAGAGAGGGTGCTC

Downstream 100 bases:

>100_bases
GGAATGGCAACCTCAAAAGTTCGCTCCCCGCATTCCGTGGCTACGCCAAGCCGCGTGCGCTACTGGGTGATTGTTTTCGC
GGTCGCCCTGGCGGTGGTCA

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Xylose Isomerase Domain-Containing Protein TIM Barrel; 16S RRNA-Processing Protein; Xylose Isomerase-Like Protein

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MFSRRDFGRIALSAIPLAAARGAMIDSRVSGVQIGAQSYSFRDRPMEKAIEACKEVGLGECELWQGHVEPNPSGPDAREE
LRKWRLETPLDHFATIRKQWNDAGIVLYAYNLSFNDSFTDAEIDRGFEIARAMGVKVLTASSTVSAAKKVAPFADRHKIQ
VAMHGHDNLSDPNQFAKPESFEAALRMSKYFMINLDIGHFTSAGYDPVEYLKQHHDRIVDLHIKDRNKKHDNLPFGQGET
PIKEVLLLLSRNKWKIPANIEYEYKGNNAVAEVSKCYQYMKAALA

Sequences:

>Translated_285_residues
MFSRRDFGRIALSAIPLAAARGAMIDSRVSGVQIGAQSYSFRDRPMEKAIEACKEVGLGECELWQGHVEPNPSGPDAREE
LRKWRLETPLDHFATIRKQWNDAGIVLYAYNLSFNDSFTDAEIDRGFEIARAMGVKVLTASSTVSAAKKVAPFADRHKIQ
VAMHGHDNLSDPNQFAKPESFEAALRMSKYFMINLDIGHFTSAGYDPVEYLKQHHDRIVDLHIKDRNKKHDNLPFGQGET
PIKEVLLLLSRNKWKIPANIEYEYKGNNAVAEVSKCYQYMKAALA
>Mature_285_residues
MFSRRDFGRIALSAIPLAAARGAMIDSRVSGVQIGAQSYSFRDRPMEKAIEACKEVGLGECELWQGHVEPNPSGPDAREE
LRKWRLETPLDHFATIRKQWNDAGIVLYAYNLSFNDSFTDAEIDRGFEIARAMGVKVLTASSTVSAAKKVAPFADRHKIQ
VAMHGHDNLSDPNQFAKPESFEAALRMSKYFMINLDIGHFTSAGYDPVEYLKQHHDRIVDLHIKDRNKKHDNLPFGQGET
PIKEVLLLLSRNKWKIPANIEYEYKGNNAVAEVSKCYQYMKAALA

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32144; Mature: 32144

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSRRDFGRIALSAIPLAAARGAMIDSRVSGVQIGAQSYSFRDRPMEKAIEACKEVGLGE
CCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCC
CELWQGHVEPNPSGPDAREELRKWRLETPLDHFATIRKQWNDAGIVLYAYNLSFNDSFTD
EEEEECCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCC
AEIDRGFEIARAMGVKVLTASSTVSAAKKVAPFADRHKIQVAMHGHDNLSDPNQFAKPES
HHHHHHHHHHHHHCEEEEECCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHCCCCH
FEAALRMSKYFMINLDIGHFTSAGYDPVEYLKQHHDRIVDLHIKDRNKKHDNLPFGQGET
HHHHHHHCEEEEEEEECCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCC
PIKEVLLLLSRNKWKIPANIEYEYKGNNAVAEVSKCYQYMKAALA
CHHHHHHHHCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFSRRDFGRIALSAIPLAAARGAMIDSRVSGVQIGAQSYSFRDRPMEKAIEACKEVGLGE
CCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCC
CELWQGHVEPNPSGPDAREELRKWRLETPLDHFATIRKQWNDAGIVLYAYNLSFNDSFTD
EEEEECCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCC
AEIDRGFEIARAMGVKVLTASSTVSAAKKVAPFADRHKIQVAMHGHDNLSDPNQFAKPES
HHHHHHHHHHHHHCEEEEECCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHCCCCH
FEAALRMSKYFMINLDIGHFTSAGYDPVEYLKQHHDRIVDLHIKDRNKKHDNLPFGQGET
HHHHHHHCEEEEEEEECCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCC
PIKEVLLLLSRNKWKIPANIEYEYKGNNAVAEVSKCYQYMKAALA
CHHHHHHHHCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA