| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is gudP [H]
Identifier: 116620939
GI number: 116620939
Start: 2264594
End: 2265889
Strand: Reverse
Name: gudP [H]
Synonym: Acid_1820
Alternate gene names: 116620939
Gene position: 2265889-2264594 (Counterclockwise)
Preceding gene: 116620940
Following gene: 116620938
Centisome position: 22.74
GC content: 63.04
Gene sequence:
>1296_bases ATGGCAACCTCAAAAGTTCGCTCCCCGCATTCCGTGGCTACGCCAAGCCGCGTGCGCTACTGGGTGATTGTTTTCGCGGT CGCCCTGGCGGTGGTCACGTATATCGACCGCGTCTCCATCTCCTTCGCCGCGCCGGCGATTTCGCACGACCTTGGGCTCG ACTCGGTGCAGATGGGCTGGGTGCTGTTCGCCTTCGCCTGCGCCTACGCGCTCTTCGAAATTCCAGGAGGCTATCTGGGC GACCGCAGCGGACCGCGCAGCGTGCTGATGCGGATCGTGCTGTGGTGGTCTTTCTTCACGGCCGCCACGGGATGGGCGTG GAGCTACTCATCGCTCCTGGTGACGCGCTTTCTGTTTGGCGCGGGCGAGGCCGGATGTTTCCCCAACCTCACCAAGGCGT TCACGGTTTGGCTGCCGGAGCGCGAGCGCGTGCGCGCGCAGAGCATCACGTGGCTCTCCGCACGCTGGGGTGGCGCGTTT ACCCCGCCGCTGGTGCTCTGGGTGATGAACCGCATCGGTTGGCGGCATGCCTTCGAGGTCTTCGGCGCGATAGGCGTGGT GTGGGCCGTGGTGTTCTATCGCTGGTACCGCAATGACCCGCTGGAGAATCCGAAGCTGAACGATGGCGAACGCGAACTGC TGCGGCACTCCGCGGCCAATGCCAGCGGGCACGGCGATGTTCCCTGGGGGAAATTTGTCGGCAGCCCGCGGGTGTGGCTG CTCTGCGCACAGTATTTCTGCCTTTCCTACGGCTGGTATTTTTACATCACTTGGCTGCCCACCTATTTGAAGGAAGGTCG CCATTTGAATCTCACCAACATGGCATTGTTCGGAATTCTGCCGCTGCTCTTCGGCGGCTTGGGCAACCCGGCGAGCGTCT TCGTGGGATCCCGGCTTCTGCCCCGGTTGGGCAGCATCCGCCAGACCCGCCGCGTGATGGCATACATCGGATTCACCGGC GCCGCCGGCTTTCTGATTCTCTCCACGCGGGTGAACGATGCACTGTTGGCCGTGGTGGCCATCTCGATGGCGAGTTTCTG CAACGACCTGGTGATGCCCGGGGCATGGGCCTCCGCGATGGATATCGGCGGCAAGCACGCGGGCTCTCTTTCGGGCGCGA TGAACATGTGCGGAAACCTCGGCGGCGCTTTGTGCCCCGTGGTGATCGGCTACATCCTGCGCTGGACGCACCACGATTGG AACCTCACCTTCTATGTCTCCGCGGCGGTTTACCTGATGGGAATCCTGTGCTGGAGATTCCTGGATCCGGTGACGCCCCT GGAAGTGGAAGCATGA
Upstream 100 bases:
>100_bases GAAGATACCGGCCAACATCGAGTACGAGTACAAGGGCAACAACGCGGTCGCCGAAGTCAGCAAGTGTTACCAATACATGA AAGCAGCATTGGCTTAAGGA
Downstream 100 bases:
>100_bases TTTTCGCCTAAACTCAAGGCATGAGGGCGATCCGCCTCTGTGCGATCCTGGCTTGGGTAGGAAGCGTCTCCTATGCGCGC GAGCCGGCGACCTGGACTGC
Product: major facilitator transporter
Products: NA
Alternate protein names: D-glucarate permease [H]
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MATSKVRSPHSVATPSRVRYWVIVFAVALAVVTYIDRVSISFAAPAISHDLGLDSVQMGWVLFAFACAYALFEIPGGYLG DRSGPRSVLMRIVLWWSFFTAATGWAWSYSSLLVTRFLFGAGEAGCFPNLTKAFTVWLPERERVRAQSITWLSARWGGAF TPPLVLWVMNRIGWRHAFEVFGAIGVVWAVVFYRWYRNDPLENPKLNDGERELLRHSAANASGHGDVPWGKFVGSPRVWL LCAQYFCLSYGWYFYITWLPTYLKEGRHLNLTNMALFGILPLLFGGLGNPASVFVGSRLLPRLGSIRQTRRVMAYIGFTG AAGFLILSTRVNDALLAVVAISMASFCNDLVMPGAWASAMDIGGKHAGSLSGAMNMCGNLGGALCPVVIGYILRWTHHDW NLTFYVSAAVYLMGILCWRFLDPVTPLEVEA
Sequences:
>Translated_431_residues MATSKVRSPHSVATPSRVRYWVIVFAVALAVVTYIDRVSISFAAPAISHDLGLDSVQMGWVLFAFACAYALFEIPGGYLG DRSGPRSVLMRIVLWWSFFTAATGWAWSYSSLLVTRFLFGAGEAGCFPNLTKAFTVWLPERERVRAQSITWLSARWGGAF TPPLVLWVMNRIGWRHAFEVFGAIGVVWAVVFYRWYRNDPLENPKLNDGERELLRHSAANASGHGDVPWGKFVGSPRVWL LCAQYFCLSYGWYFYITWLPTYLKEGRHLNLTNMALFGILPLLFGGLGNPASVFVGSRLLPRLGSIRQTRRVMAYIGFTG AAGFLILSTRVNDALLAVVAISMASFCNDLVMPGAWASAMDIGGKHAGSLSGAMNMCGNLGGALCPVVIGYILRWTHHDW NLTFYVSAAVYLMGILCWRFLDPVTPLEVEA >Mature_430_residues ATSKVRSPHSVATPSRVRYWVIVFAVALAVVTYIDRVSISFAAPAISHDLGLDSVQMGWVLFAFACAYALFEIPGGYLGD RSGPRSVLMRIVLWWSFFTAATGWAWSYSSLLVTRFLFGAGEAGCFPNLTKAFTVWLPERERVRAQSITWLSARWGGAFT PPLVLWVMNRIGWRHAFEVFGAIGVVWAVVFYRWYRNDPLENPKLNDGERELLRHSAANASGHGDVPWGKFVGSPRVWLL CAQYFCLSYGWYFYITWLPTYLKEGRHLNLTNMALFGILPLLFGGLGNPASVFVGSRLLPRLGSIRQTRRVMAYIGFTGA AGFLILSTRVNDALLAVVAISMASFCNDLVMPGAWASAMDIGGKHAGSLSGAMNMCGNLGGALCPVVIGYILRWTHHDWN LTFYVSAAVYLMGILCWRFLDPVTPLEVEA
Specific function: Uptake of D-glucarate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI6912666, Length=369, Percent_Identity=28.4552845528455, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI9966811, Length=405, Percent_Identity=23.2098765432099, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI9945322, Length=376, Percent_Identity=22.3404255319149, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI21322234, Length=377, Percent_Identity=22.2811671087533, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI148743791, Length=351, Percent_Identity=23.3618233618234, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI154350196, Length=392, Percent_Identity=24.4897959183673, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI4885441, Length=361, Percent_Identity=25.207756232687, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI148728191, Length=287, Percent_Identity=22.9965156794425, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI154800443, Length=329, Percent_Identity=23.7082066869301, Blast_Score=75, Evalue=8e-14, Organism=Escherichia coli, GI1789152, Length=413, Percent_Identity=28.5714285714286, Blast_Score=169, Evalue=3e-43, Organism=Escherichia coli, GI1789515, Length=425, Percent_Identity=27.0588235294118, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI2367379, Length=409, Percent_Identity=26.6503667481663, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI87082320, Length=429, Percent_Identity=27.7389277389277, Blast_Score=149, Evalue=5e-37, Organism=Escherichia coli, GI2367193, Length=274, Percent_Identity=26.6423357664234, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI87082071, Length=390, Percent_Identity=25.6410256410256, Blast_Score=99, Evalue=4e-22, Organism=Caenorhabditis elegans, GI115533556, Length=376, Percent_Identity=25.7978723404255, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI115533554, Length=376, Percent_Identity=25.7978723404255, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17535049, Length=426, Percent_Identity=24.6478873239437, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI71997452, Length=359, Percent_Identity=21.7270194986072, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17552542, Length=377, Percent_Identity=24.1379310344828, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17554148, Length=341, Percent_Identity=22.8739002932551, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17554962, Length=333, Percent_Identity=21.3213213213213, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI71991453, Length=402, Percent_Identity=22.1393034825871, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71991448, Length=402, Percent_Identity=22.1393034825871, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI32565914, Length=363, Percent_Identity=23.4159779614325, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI25141316, Length=352, Percent_Identity=22.1590909090909, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25141318, Length=352, Percent_Identity=22.1590909090909, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25141341, Length=345, Percent_Identity=22.3188405797101, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI193205400, Length=220, Percent_Identity=23.6363636363636, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17569727, Length=324, Percent_Identity=20.679012345679, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17566884, Length=321, Percent_Identity=23.3644859813084, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI24648416, Length=424, Percent_Identity=25.2358490566038, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI21356189, Length=424, Percent_Identity=25.2358490566038, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24583789, Length=369, Percent_Identity=26.8292682926829, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI20129235, Length=378, Percent_Identity=26.1904761904762, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI24641682, Length=402, Percent_Identity=24.8756218905473, Blast_Score=111, Evalue=9e-25, Organism=Drosophila melanogaster, GI19922400, Length=385, Percent_Identity=25.1948051948052, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24654215, Length=435, Percent_Identity=23.6781609195402, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI28573299, Length=416, Percent_Identity=24.2788461538462, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI24639764, Length=408, Percent_Identity=23.2843137254902, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI24584153, Length=365, Percent_Identity=24.3835616438356, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI19920686, Length=426, Percent_Identity=24.6478873239437, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI24653727, Length=353, Percent_Identity=24.6458923512748, Blast_Score=99, Evalue=8e-21, Organism=Drosophila melanogaster, GI28573708, Length=372, Percent_Identity=23.9247311827957, Blast_Score=99, Evalue=8e-21, Organism=Drosophila melanogaster, GI28573707, Length=372, Percent_Identity=23.9247311827957, Blast_Score=99, Evalue=8e-21, Organism=Drosophila melanogaster, GI24580790, Length=327, Percent_Identity=22.9357798165138, Blast_Score=96, Evalue=6e-20, Organism=Drosophila melanogaster, GI24655271, Length=429, Percent_Identity=22.1445221445221, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI20130135, Length=429, Percent_Identity=22.1445221445221, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24658658, Length=382, Percent_Identity=24.0837696335079, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI45550460, Length=415, Percent_Identity=22.6506024096386, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI281361682, Length=374, Percent_Identity=21.9251336898396, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI24655255, Length=382, Percent_Identity=23.0366492146597, Blast_Score=85, Evalue=9e-17, Organism=Drosophila melanogaster, GI24658689, Length=411, Percent_Identity=22.3844282238443, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI45550364, Length=417, Percent_Identity=23.5011990407674, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI24658696, Length=435, Percent_Identity=21.8390804597701, Blast_Score=76, Evalue=6e-14, Organism=Drosophila melanogaster, GI20130167, Length=432, Percent_Identity=21.2962962962963, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI24658666, Length=414, Percent_Identity=20.7729468599034, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI45550495, Length=386, Percent_Identity=22.020725388601, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI62484226, Length=413, Percent_Identity=20.3389830508475, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI45552797, Length=388, Percent_Identity=22.4226804123711, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI24658674, Length=378, Percent_Identity=19.8412698412698, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24651789, Length=407, Percent_Identity=21.8673218673219, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI24651787, Length=407, Percent_Identity=21.8673218673219, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47796; Mature: 47665
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSKVRSPHSVATPSRVRYWVIVFAVALAVVTYIDRVSISFAAPAISHDLGLDSVQMGW CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHH VLFAFACAYALFEIPGGYLGDRSGPRSVLMRIVLWWSFFTAATGWAWSYSSLLVTRFLFG HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC AGEAGCFPNLTKAFTVWLPERERVRAQSITWLSARWGGAFTPPLVLWVMNRIGWRHAFEV CCCCCCCCCCHHHEEEECCCHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH FGAIGVVWAVVFYRWYRNDPLENPKLNDGERELLRHSAANASGHGDVPWGKFVGSPRVWL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHH LCAQYFCLSYGWYFYITWLPTYLKEGRHLNLTNMALFGILPLLFGGLGNPASVFVGSRLL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH PRLGSIRQTRRVMAYIGFTGAAGFLILSTRVNDALLAVVAISMASFCNDLVMPGAWASAM HHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH DIGGKHAGSLSGAMNMCGNLGGALCPVVIGYILRWTHHDWNLTFYVSAAVYLMGILCWRF HCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHH LDPVTPLEVEA HCCCCCCCCCC >Mature Secondary Structure ATSKVRSPHSVATPSRVRYWVIVFAVALAVVTYIDRVSISFAAPAISHDLGLDSVQMGW CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHH VLFAFACAYALFEIPGGYLGDRSGPRSVLMRIVLWWSFFTAATGWAWSYSSLLVTRFLFG HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC AGEAGCFPNLTKAFTVWLPERERVRAQSITWLSARWGGAFTPPLVLWVMNRIGWRHAFEV CCCCCCCCCCHHHEEEECCCHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH FGAIGVVWAVVFYRWYRNDPLENPKLNDGERELLRHSAANASGHGDVPWGKFVGSPRVWL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHH LCAQYFCLSYGWYFYITWLPTYLKEGRHLNLTNMALFGILPLLFGGLGNPASVFVGSRLL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH PRLGSIRQTRRVMAYIGFTGAAGFLILSTRVNDALLAVVAISMASFCNDLVMPGAWASAM HHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH DIGGKHAGSLSGAMNMCGNLGGALCPVVIGYILRWTHHDWNLTFYVSAAVYLMGILCWRF HCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHH LDPVTPLEVEA HCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 9772162; 10762278 [H]