Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116620931

Identifier: 116620931

GI number: 116620931

Start: 2251573

End: 2252091

Strand: Reverse

Name: 116620931

Synonym: Acid_1812

Alternate gene names: NA

Gene position: 2252091-2251573 (Counterclockwise)

Preceding gene: 116620936

Following gene: 116620930

Centisome position: 22.6

GC content: 61.66

Gene sequence:

>519_bases
ATGCGGCATGTGCTTGCGATGATGTCCGACTATACGTGCAGCGAGACCATCAGCAGGTCTATCGGCGATGGCACACCGCT
TCGGATGAAAACCTTGGAACGGGTTCGGCTCCAGGTGGGGATCATCGCAGGCAAGGAGCTGTTCTCATGGCCCGGAACGG
CGTCATTCGAGCGCGACGATCCTCACGCGATCGTCGGCGGCGGGCTGACCGGAACCGGCGATTTCGGCGGCTTCTCACGC
GCCGTATTCGGCAGCGACAGCACGGTGATGACAAGCGGTGAAGAAGAAGTCCGGGCGGGCATGCGCGCCATCCTGTTCCG
GTATTCGATACCGCGCAGCGCCAGCGGGTATGTGTTGCGTTCCGGCAGCCACAGCGCCATCGTCGATTACGGCGGGTCGT
TCTGGGTGGACCCTGAGAGCGGGCGAGTGACGGCACTCGAAGTGGAAGCCGACTCCCGGCGCAACCAGATTCCCGCGGAT
CTCGATATGTTCGACGTGAAGACGTTGTTGGAGTTTTAA

Upstream 100 bases:

>100_bases
ATTGCCTGCAACTGGCTGGCTGTTGCTTCTCGCTGCCTCCTCACAGAGTTACGAACAGGAAGATGCTCGCGAGGCATTGC
GATCGCGGGTAATCGCGAAC

Downstream 100 bases:

>100_bases
GAACATCCGGATTTCCGGCGACGAGTTGCCCTTTCCCGCGAGTTCCACGCTGACGGTGGCGCACCTGCGGAGTTCGATCG
TGACCAGCAACCACATCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MRHVLAMMSDYTCSETISRSIGDGTPLRMKTLERVRLQVGIIAGKELFSWPGTASFERDDPHAIVGGGLTGTGDFGGFSR
AVFGSDSTVMTSGEEEVRAGMRAILFRYSIPRSASGYVLRSGSHSAIVDYGGSFWVDPESGRVTALEVEADSRRNQIPAD
LDMFDVKTLLEF

Sequences:

>Translated_172_residues
MRHVLAMMSDYTCSETISRSIGDGTPLRMKTLERVRLQVGIIAGKELFSWPGTASFERDDPHAIVGGGLTGTGDFGGFSR
AVFGSDSTVMTSGEEEVRAGMRAILFRYSIPRSASGYVLRSGSHSAIVDYGGSFWVDPESGRVTALEVEADSRRNQIPAD
LDMFDVKTLLEF
>Mature_172_residues
MRHVLAMMSDYTCSETISRSIGDGTPLRMKTLERVRLQVGIIAGKELFSWPGTASFERDDPHAIVGGGLTGTGDFGGFSR
AVFGSDSTVMTSGEEEVRAGMRAILFRYSIPRSASGYVLRSGSHSAIVDYGGSFWVDPESGRVTALEVEADSRRNQIPAD
LDMFDVKTLLEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18708; Mature: 18708

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHVLAMMSDYTCSETISRSIGDGTPLRMKTLERVRLQVGIIAGKELFSWPGTASFERDD
CCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEECCHHHCCCCCCCCCCCC
PHAIVGGGLTGTGDFGGFSRAVFGSDSTVMTSGEEEVRAGMRAILFRYSIPRSASGYVLR
CCEEEECCCCCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEE
SGSHSAIVDYGGSFWVDPESGRVTALEVEADSRRNQIPADLDMFDVKTLLEF
CCCCCEEEECCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MRHVLAMMSDYTCSETISRSIGDGTPLRMKTLERVRLQVGIIAGKELFSWPGTASFERDD
CCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEECCHHHCCCCCCCCCCCC
PHAIVGGGLTGTGDFGGFSRAVFGSDSTVMTSGEEEVRAGMRAILFRYSIPRSASGYVLR
CCEEEECCCCCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEE
SGSHSAIVDYGGSFWVDPESGRVTALEVEADSRRNQIPADLDMFDVKTLLEF
CCCCCEEEECCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA