| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620931
Identifier: 116620931
GI number: 116620931
Start: 2251573
End: 2252091
Strand: Reverse
Name: 116620931
Synonym: Acid_1812
Alternate gene names: NA
Gene position: 2252091-2251573 (Counterclockwise)
Preceding gene: 116620936
Following gene: 116620930
Centisome position: 22.6
GC content: 61.66
Gene sequence:
>519_bases ATGCGGCATGTGCTTGCGATGATGTCCGACTATACGTGCAGCGAGACCATCAGCAGGTCTATCGGCGATGGCACACCGCT TCGGATGAAAACCTTGGAACGGGTTCGGCTCCAGGTGGGGATCATCGCAGGCAAGGAGCTGTTCTCATGGCCCGGAACGG CGTCATTCGAGCGCGACGATCCTCACGCGATCGTCGGCGGCGGGCTGACCGGAACCGGCGATTTCGGCGGCTTCTCACGC GCCGTATTCGGCAGCGACAGCACGGTGATGACAAGCGGTGAAGAAGAAGTCCGGGCGGGCATGCGCGCCATCCTGTTCCG GTATTCGATACCGCGCAGCGCCAGCGGGTATGTGTTGCGTTCCGGCAGCCACAGCGCCATCGTCGATTACGGCGGGTCGT TCTGGGTGGACCCTGAGAGCGGGCGAGTGACGGCACTCGAAGTGGAAGCCGACTCCCGGCGCAACCAGATTCCCGCGGAT CTCGATATGTTCGACGTGAAGACGTTGTTGGAGTTTTAA
Upstream 100 bases:
>100_bases ATTGCCTGCAACTGGCTGGCTGTTGCTTCTCGCTGCCTCCTCACAGAGTTACGAACAGGAAGATGCTCGCGAGGCATTGC GATCGCGGGTAATCGCGAAC
Downstream 100 bases:
>100_bases GAACATCCGGATTTCCGGCGACGAGTTGCCCTTTCCCGCGAGTTCCACGCTGACGGTGGCGCACCTGCGGAGTTCGATCG TGACCAGCAACCACATCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MRHVLAMMSDYTCSETISRSIGDGTPLRMKTLERVRLQVGIIAGKELFSWPGTASFERDDPHAIVGGGLTGTGDFGGFSR AVFGSDSTVMTSGEEEVRAGMRAILFRYSIPRSASGYVLRSGSHSAIVDYGGSFWVDPESGRVTALEVEADSRRNQIPAD LDMFDVKTLLEF
Sequences:
>Translated_172_residues MRHVLAMMSDYTCSETISRSIGDGTPLRMKTLERVRLQVGIIAGKELFSWPGTASFERDDPHAIVGGGLTGTGDFGGFSR AVFGSDSTVMTSGEEEVRAGMRAILFRYSIPRSASGYVLRSGSHSAIVDYGGSFWVDPESGRVTALEVEADSRRNQIPAD LDMFDVKTLLEF >Mature_172_residues MRHVLAMMSDYTCSETISRSIGDGTPLRMKTLERVRLQVGIIAGKELFSWPGTASFERDDPHAIVGGGLTGTGDFGGFSR AVFGSDSTVMTSGEEEVRAGMRAILFRYSIPRSASGYVLRSGSHSAIVDYGGSFWVDPESGRVTALEVEADSRRNQIPAD LDMFDVKTLLEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18708; Mature: 18708
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHVLAMMSDYTCSETISRSIGDGTPLRMKTLERVRLQVGIIAGKELFSWPGTASFERDD CCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEECCHHHCCCCCCCCCCCC PHAIVGGGLTGTGDFGGFSRAVFGSDSTVMTSGEEEVRAGMRAILFRYSIPRSASGYVLR CCEEEECCCCCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEE SGSHSAIVDYGGSFWVDPESGRVTALEVEADSRRNQIPADLDMFDVKTLLEF CCCCCEEEECCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MRHVLAMMSDYTCSETISRSIGDGTPLRMKTLERVRLQVGIIAGKELFSWPGTASFERDD CCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEECCHHHCCCCCCCCCCCC PHAIVGGGLTGTGDFGGFSRAVFGSDSTVMTSGEEEVRAGMRAILFRYSIPRSASGYVLR CCEEEECCCCCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEE SGSHSAIVDYGGSFWVDPESGRVTALEVEADSRRNQIPADLDMFDVKTLLEF CCCCCEEEECCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA