| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116620930
Identifier: 116620930
GI number: 116620930
Start: 2250936
End: 2251547
Strand: Reverse
Name: 116620930
Synonym: Acid_1811
Alternate gene names: NA
Gene position: 2251547-2250936 (Counterclockwise)
Preceding gene: 116620931
Following gene: 116620929
Centisome position: 22.59
GC content: 61.6
Gene sequence:
>612_bases TTGCCCTTTCCCGCGAGTTCCACGCTGACGGTGGCGCACCTGCGGAGTTCGATCGTGACCAGCAACCACATCGAGTTCAC CGGATGCCGGCAGTACACCGCCGAATCCAACATTCAATTTGGCGAACACCGCACGGTCGAGCGGATTCCCAGGCTTCCGC CGCTCCCGGGCGAATTGCCGGGCGGCATGGTCTTTGATGTAGCGCTCGATGACCCGATTCGCGCGGCTAGCGCTGCGGCG GGCGATGCCATAACGGCAACCGTGCTCCGTTCGGTCAAGGCCGCCGGGTTGGACATACCGAAGGGAGCGAAATTCATCGG CCGCGTTCTTCGCGTAGAGACCGATCTCGAAAAGTTCGCGACTCACATACGGCTCGGCTTCTCCCAACTGGAATCCGGCG GCCGCCGTTTTCCGTTGCGCGCTCGATTCGTTACGTTTGACGCCGTCCGCGGCGTGGTCGCGGGGGCGCCGCGCGTCAGG TGGGTCAATCTTCACGACAGCCACACCGCGGACACGGACGAATGGACGGCGAAGACGGACTTCACGCTTGCGGAGAAAGA GGGACTATTGCCAAAGGGATTTCGTATGGAATGGATTACGAAGGCAGATTAG
Upstream 100 bases:
>100_bases GAAGCCGACTCCCGGCGCAACCAGATTCCCGCGGATCTCGATATGTTCGACGTGAAGACGTTGTTGGAGTTTTAAGAACA TCCGGATTTCCGGCGACGAG
Downstream 100 bases:
>100_bases CGCCTTTCAGAGCCGTGACCGTTAGGGAGCGATCGCTTGCCCCCGGATAGCACGTACACTGGGGGCTTGACCCCTCTTCT TGAACTTGAAAACGTCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MPFPASSTLTVAHLRSSIVTSNHIEFTGCRQYTAESNIQFGEHRTVERIPRLPPLPGELPGGMVFDVALDDPIRAASAAA GDAITATVLRSVKAAGLDIPKGAKFIGRVLRVETDLEKFATHIRLGFSQLESGGRRFPLRARFVTFDAVRGVVAGAPRVR WVNLHDSHTADTDEWTAKTDFTLAEKEGLLPKGFRMEWITKAD
Sequences:
>Translated_203_residues MPFPASSTLTVAHLRSSIVTSNHIEFTGCRQYTAESNIQFGEHRTVERIPRLPPLPGELPGGMVFDVALDDPIRAASAAA GDAITATVLRSVKAAGLDIPKGAKFIGRVLRVETDLEKFATHIRLGFSQLESGGRRFPLRARFVTFDAVRGVVAGAPRVR WVNLHDSHTADTDEWTAKTDFTLAEKEGLLPKGFRMEWITKAD >Mature_202_residues PFPASSTLTVAHLRSSIVTSNHIEFTGCRQYTAESNIQFGEHRTVERIPRLPPLPGELPGGMVFDVALDDPIRAASAAAG DAITATVLRSVKAAGLDIPKGAKFIGRVLRVETDLEKFATHIRLGFSQLESGGRRFPLRARFVTFDAVRGVVAGAPRVRW VNLHDSHTADTDEWTAKTDFTLAEKEGLLPKGFRMEWITKAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22252; Mature: 22120
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFPASSTLTVAHLRSSIVTSNHIEFTGCRQYTAESNIQFGEHRTVERIPRLPPLPGELP CCCCCCCCCHHHHHHHHHHCCCCEEEECCHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCC GGMVFDVALDDPIRAASAAAGDAITATVLRSVKAAGLDIPKGAKFIGRVLRVETDLEKFA CCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH THIRLGFSQLESGGRRFPLRARFVTFDAVRGVVAGAPRVRWVNLHDSHTADTDEWTAKTD HHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCC FTLAEKEGLLPKGFRMEWITKAD CEEHHCCCCCCCCCEEEEEECCC >Mature Secondary Structure PFPASSTLTVAHLRSSIVTSNHIEFTGCRQYTAESNIQFGEHRTVERIPRLPPLPGELP CCCCCCCCHHHHHHHHHHCCCCEEEECCHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCC GGMVFDVALDDPIRAASAAAGDAITATVLRSVKAAGLDIPKGAKFIGRVLRVETDLEKFA CCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH THIRLGFSQLESGGRRFPLRARFVTFDAVRGVVAGAPRVRWVNLHDSHTADTDEWTAKTD HHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCC FTLAEKEGLLPKGFRMEWITKAD CEEHHCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA