Click here to switch to the map view.

The map label for this gene is ubiB [H]

Identifier: 116620909

GI number: 116620909

Start: 2227357

End: 2228946

Strand: Direct

Name: ubiB [H]

Synonym: Acid_1790

Alternate gene names: 116620909

Gene position: 2227357-2228946 (Clockwise)

Preceding gene: 116620908

Following gene: 116620910

Centisome position: 22.35

GC content: 65.72

Gene sequence:

>1590_bases
ATGGAAACCGCATCGCCCGCCGGTATCGACCTGGGAGCACTCGCGCCCTGGGCCGCCCTCTTCTCCGCCCTCGATTCCCC
CGCCCGCATCGCAGCCGTGGAATCCACTCTCAGGGGCCGTGGCGGCCGCCGTTGGCGCGCCGAAATCGGCCTCTGGATCG
GTCGCCTGGTGCCGGTCGAAATCCTTGTCCCCGAGTCCGCCGCTCGCTGGCGCCCCCTCGTCCGCGACGCGTTCCGGTTC
GTGTTCGAACACCTCTCCAGCGCGCGCCTCGCGGCCAAAGTCGTACAACAATTCGAACTGCCCGCCGGTACGCCGCCGGA
ACAGCGCCTCCTGCACCTTGTTACCCGAATGCCCGGCTTGCAGAAGGTCGGGCAAGTGCTCGCCCGCAACCGCCGCCTCG
CCCCCAAACTCCGCCTGGCACTATCCGAACTCGAAAACGGGATGTCGGACGTCACGCCCGGGGAGGCCCGCCGCATCATC
GAAGCCCGCCTCGGCCCCCGCCTCGCCGAGTATGCCGTCGAACTCGACACCGTCATCCTCTCCGAGGCCAGCGTCAGCGC
GGTCGTGCGCTTCACCTGGAGTTACCCGGGGCGCGAGCGCGAACAGGGCGTCTTTAAGGTGCTCAAACCCTATGTCCCGC
TCTGCTTCGGCGAGGACATGGCCCTTCTCCGCAAACTCGGCGTCTTTCTCACTTCTCCCCAACGAGGCTATGGTTTCGCC
ATCCGCGATGTGGAGGAGATGATCACCGAAGTACTCCTCCTGCTGGAACACGAATTGGATTTCCGCCGCGAACAAGCCAC
CCTGGGCGAAGCCGCCAAGATGTATCGCGCCAGCATCGGCATCCGCGTTCCCCGCGTGATCGCACCGCTCTGCGCTGGCG
ATCTCACCGCCATGAGCGCCGAAGCCGGTGTCAAGGTGACGGAGGCCTTTCCCCGCTCGCCCATCCGCCGCGCTCGCATC
GCCGACCAGTTGATCGAAGCGCTGATCGCCGTCCCGTTCTTTTCCCGTGAGCACGAGGCCGTCTTCCACGCCGACCCGCA
CGCAGGCAACCTGCTCTATGACGAGACCAATCGCGAGCTCGTCGTCCTCGATTGGGCGCTCGCCGAGCGCCTCAGCCTGG
AATCCCGCCGCCAGCTGGTGCTGCTCTCAGTCATGATGACTCTGCGCAATCCCGAAGGCGTCCGCCGCGCAATCCACGAT
CTCGCCCTCGCCGCTGGCCCGCGCAACCATTCCCTGCTTCCTGTAATCGATGATTGCTGCGAACGCTTCTTCACGCAGCT
GCCCGCTGACAGTTCTCCCGGTACGCTCGACGCGATGCGCCTGCTCGATCGCATCGCCCTGGCCGGCGTTCACTTTCCGC
CGCCGCTCTTCCTCTTTCGCAAAATTGTGCTGACCCTGGACGGCGTGCTCTACGACATCGCCGGTCCCAATGTGCGCATC
GATGAAGTCATCGCCCGCGAGTTCCTCACCCGCTGCGCCGCCAGCCTCGGCCTCTTCCATGCCCCCCTGGAATGGCGTGA
TTTCGCAACCATCCCCTGGGCCACCGTGACTTACGCCTTCCAGCGCCTTTACCCCTCCACCACCACGTGA

Upstream 100 bases:

>100_bases
GGAAAGTGAGCTGGAGCAGCTCCGCCGCCGTGTGGCGGAACTGGAACAGCGCCAAAAACCTCGGGCCCGCGCCAAACGCA
AGCCCTGAAGAAGGAGTGCG

Downstream 100 bases:

>100_bases
CTCGCGTCCAGATCGTACCCTTCGTCCCTGGCCGTCCGAATCGCGAGCTCCCTCAGCTCTTCCTCGCCCGCATCGCGCGG
CGTCTTGGTGCACTGCCGCC

Product: hypothetical protein

Products: 2-octaprenyl-6-hydroxyphenol [C]

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
METASPAGIDLGALAPWAALFSALDSPARIAAVESTLRGRGGRRWRAEIGLWIGRLVPVEILVPESAARWRPLVRDAFRF
VFEHLSSARLAAKVVQQFELPAGTPPEQRLLHLVTRMPGLQKVGQVLARNRRLAPKLRLALSELENGMSDVTPGEARRII
EARLGPRLAEYAVELDTVILSEASVSAVVRFTWSYPGREREQGVFKVLKPYVPLCFGEDMALLRKLGVFLTSPQRGYGFA
IRDVEEMITEVLLLLEHELDFRREQATLGEAAKMYRASIGIRVPRVIAPLCAGDLTAMSAEAGVKVTEAFPRSPIRRARI
ADQLIEALIAVPFFSREHEAVFHADPHAGNLLYDETNRELVVLDWALAERLSLESRRQLVLLSVMMTLRNPEGVRRAIHD
LALAAGPRNHSLLPVIDDCCERFFTQLPADSSPGTLDAMRLLDRIALAGVHFPPPLFLFRKIVLTLDGVLYDIAGPNVRI
DEVIAREFLTRCAASLGLFHAPLEWRDFATIPWATVTYAFQRLYPSTTT

Sequences:

>Translated_529_residues
METASPAGIDLGALAPWAALFSALDSPARIAAVESTLRGRGGRRWRAEIGLWIGRLVPVEILVPESAARWRPLVRDAFRF
VFEHLSSARLAAKVVQQFELPAGTPPEQRLLHLVTRMPGLQKVGQVLARNRRLAPKLRLALSELENGMSDVTPGEARRII
EARLGPRLAEYAVELDTVILSEASVSAVVRFTWSYPGREREQGVFKVLKPYVPLCFGEDMALLRKLGVFLTSPQRGYGFA
IRDVEEMITEVLLLLEHELDFRREQATLGEAAKMYRASIGIRVPRVIAPLCAGDLTAMSAEAGVKVTEAFPRSPIRRARI
ADQLIEALIAVPFFSREHEAVFHADPHAGNLLYDETNRELVVLDWALAERLSLESRRQLVLLSVMMTLRNPEGVRRAIHD
LALAAGPRNHSLLPVIDDCCERFFTQLPADSSPGTLDAMRLLDRIALAGVHFPPPLFLFRKIVLTLDGVLYDIAGPNVRI
DEVIAREFLTRCAASLGLFHAPLEWRDFATIPWATVTYAFQRLYPSTTT
>Mature_529_residues
METASPAGIDLGALAPWAALFSALDSPARIAAVESTLRGRGGRRWRAEIGLWIGRLVPVEILVPESAARWRPLVRDAFRF
VFEHLSSARLAAKVVQQFELPAGTPPEQRLLHLVTRMPGLQKVGQVLARNRRLAPKLRLALSELENGMSDVTPGEARRII
EARLGPRLAEYAVELDTVILSEASVSAVVRFTWSYPGREREQGVFKVLKPYVPLCFGEDMALLRKLGVFLTSPQRGYGFA
IRDVEEMITEVLLLLEHELDFRREQATLGEAAKMYRASIGIRVPRVIAPLCAGDLTAMSAEAGVKVTEAFPRSPIRRARI
ADQLIEALIAVPFFSREHEAVFHADPHAGNLLYDETNRELVVLDWALAERLSLESRRQLVLLSVMMTLRNPEGVRRAIHD
LALAAGPRNHSLLPVIDDCCERFFTQLPADSSPGTLDAMRLLDRIALAGVHFPPPLFLFRKIVLTLDGVLYDIAGPNVRI
DEVIAREFLTRCAASLGLFHAPLEWRDFATIPWATVTYAFQRLYPSTTT

Specific function: Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis [H]

COG id: COG0661

COG function: function code R; Predicted unusual protein kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC1 family. UbiB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004147
- InterPro:   IPR011009
- InterPro:   IPR010232 [H]

Pfam domain/function: PF03109 ABC1 [H]

EC number: NA

Molecular weight: Translated: 58919; Mature: 58919

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METASPAGIDLGALAPWAALFSALDSPARIAAVESTLRGRGGRRWRAEIGLWIGRLVPVE
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEE
ILVPESAARWRPLVRDAFRFVFEHLSSARLAAKVVQQFELPAGTPPEQRLLHLVTRMPGL
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCH
QKVGQVLARNRRLAPKLRLALSELENGMSDVTPGEARRIIEARLGPRLAEYAVELDTVIL
HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHH
SEASVSAVVRFTWSYPGREREQGVFKVLKPYVPLCFGEDMALLRKLGVFLTSPQRGYGFA
HHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHCCCCCCCCCCH
IRDVEEMITEVLLLLEHELDFRREQATLGEAAKMYRASIGIRVPRVIAPLCAGDLTAMSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH
EAGVKVTEAFPRSPIRRARIADQLIEALIAVPFFSREHEAVFHADPHAGNLLYDETNREL
HCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEECCCCEE
VVLDWALAERLSLESRRQLVLLSVMMTLRNPEGVRRAIHDLALAAGPRNHSLLPVIDDCC
EEEEHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
ERFFTQLPADSSPGTLDAMRLLDRIALAGVHFPPPLFLFRKIVLTLDGVLYDIAGPNVRI
HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCHH
DEVIAREFLTRCAASLGLFHAPLEWRDFATIPWATVTYAFQRLYPSTTT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
METASPAGIDLGALAPWAALFSALDSPARIAAVESTLRGRGGRRWRAEIGLWIGRLVPVE
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEE
ILVPESAARWRPLVRDAFRFVFEHLSSARLAAKVVQQFELPAGTPPEQRLLHLVTRMPGL
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCH
QKVGQVLARNRRLAPKLRLALSELENGMSDVTPGEARRIIEARLGPRLAEYAVELDTVIL
HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHH
SEASVSAVVRFTWSYPGREREQGVFKVLKPYVPLCFGEDMALLRKLGVFLTSPQRGYGFA
HHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHCCCCCCCCCCH
IRDVEEMITEVLLLLEHELDFRREQATLGEAAKMYRASIGIRVPRVIAPLCAGDLTAMSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH
EAGVKVTEAFPRSPIRRARIADQLIEALIAVPFFSREHEAVFHADPHAGNLLYDETNREL
HCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEECCCCEE
VVLDWALAERLSLESRRQLVLLSVMMTLRNPEGVRRAIHDLALAAGPRNHSLLPVIDDCC
EEEEHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
ERFFTQLPADSSPGTLDAMRLLDRIALAGVHFPPPLFLFRKIVLTLDGVLYDIAGPNVRI
HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCHH
DEVIAREFLTRCAASLGLFHAPLEWRDFATIPWATVTYAFQRLYPSTTT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2 2-octaprenylphenol; O2 [C]

Specific reaction: 2 2-octaprenylphenol + O2 = 2 2-octaprenyl-6-hydroxyphenol [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA