| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620910
Identifier: 116620910
GI number: 116620910
Start: 2229225
End: 2231096
Strand: Direct
Name: 116620910
Synonym: Acid_1791
Alternate gene names: NA
Gene position: 2229225-2231096 (Clockwise)
Preceding gene: 116620909
Following gene: 116620913
Centisome position: 22.37
GC content: 65.6
Gene sequence:
>1872_bases GTGAAGTTCTCCGAATGGCTGTTGGCCGACCTCCGCGTTCCCGAAGGAATCCAAAGCCCCGCCCACCCGGTACACCCCTG GTGGCGTGTGATGTGCCTCACCGGAGTTGATTACTTCTCCACCCTTGGCTATCAGCCCGGCATCGCCTACCTGGCCGCCG GATTACTTTCTCCCTTGGCCACACTCATCCTCGTTCTGGTGACCCTGTTCGGCGCCCTGCCGGTCTATTCCCGAGTGGCC GCTGCCAGCCCCAATGGCCAGGGCAGCATCGGGATGCTGGAGCGCCTCTTCCCCAAGTGGAGCGGCAAGGTCTTCGTCCT CATCCTGCTCGGCTTCGCCACCACGGATTTCGTGATCACCATGACACTTTCCGCCGCCGATGCCGCCGCCCACGTGGTGC AGAACCCCTTCGTCCCCGACTGGATGCGCAGTCAGATGGGTATCACCCTGATCCTGCTCGCCATCCTCGGCTCCATCTTC ATGATGGGATTCAAGGAGGCCATCGGTGTCGCCGTCATCCTCGTCGCGCTCTACCTCTCGCTCAACCTGGTGGTGACTGC CATCGCTCTCCGCCGCATCTTCACCCACCCCGAGCTCATCCCCCACTGGAAGAGTGCGCTCTTTGCAACTCACGGCAGCC CCTGGACCATGCTCGGAATCTCGCTCCTGCTCTTCCCCAAACTCGCCCTCGGACTCTCCGGCTTCGAAACCGGTGTCGCC GTCATGCCCCTAGTCAAAGCCGAGGATCTGGCCGCCCGGATTCGCAATACGCGCAAGCTGCTTTTCACCGCCGCCGCCAT CATGAGCGTGTTCCTGATGGCGACCAGCTTCGCCACCGCGCTCCTTATTGAGCCCGAGAAATTCCGGGAGGGCGGGGAAG CCAATGGCCGTGCCCTGGCCTACCTCGCCCACCGCTACGGCGGCGGCGCCTTCGGCTCGCTCTACGACGTCAGCACCATT CTCATCCTCGCCTTCGCCGGCGCCTCCGCCATGGCCGGCCTGCTCAATCTCATCCCGCGCTACCTTCCGCGCTTCGGCAT GGCCCCCGAGTGGGCGCGCGCCTCGCGGCCCCTCGTGCTCGTCTTCATGGCCGTGGCCTTCGCGGTCACCCTGCTCTTCC GCGCCAGCGTCGATGCACAGGGCGGCGCCTACGCCACCGGCGTCCTCGTCCTGATCACCTCCGGCGCTACCGCCGTCACC CTCTCCGTGTGGAACTCCCGCGCCCGCTGGCCCTTCCTCGCCATCGCCGTGATCTTCGTCTACACCACCGCGATGAACAT CCATGAGCGCCCCGAGGGCATCAAGATCGCGTCCTTCTTCATCGGCTCCATGATCCTGACCTCGTTGATCTCGCGCGCTC TCCGCTCCACCGAACTCCGCATCTGCGCCGTCGAATTCGACCATGCCGCCCGCGCCTTGCTCGCCGCCGACGAGGACCAG TTGATCCGCGTCATCGCCCGCCGACCGCGCCCCGCCGAGTCCGAGCAGTTGCTCGACGAGGCCGACCGCGCCATGCGCTT CAACCACTGCCTGGAACCCAACGACCAGCTCTATTTCCTCGAAGTGGAGCGCGGCGATGCGTCGGAGTTCACCGACACCC TGCGTGTCACCGGCGAGCGCGTCGGCGCCCACGCCGTCCTCCGCGCCAGCAGCCCCGTGGTCGCCAATGCCATCGCCGCC CTGTTGATCGAACTGGAGCGGACCACCGGCAAGCTTCCCCACGCCTACTTCAGCTGGACCGAGGGTAACCCCGTCATCAA CCTCATCCGCTTCCTGATCCTCGGCGAAGGCGACGTCGCCCCGATTTGTCACGAAGTCCTCCGCCGCGCCGTTCCCGACC CGGCTCACCGCCCCATCATCCATGTGACATGA
Upstream 100 bases:
>100_bases CCTGAATCATTGCCATAACCGGGGCCTCCCGATCTCCAGATTACTCGCGATCTCCACTCTTGAAAAGGGCTATTGGAGGC CTTCGTGCTACATTCGTCCC
Downstream 100 bases:
>100_bases CGGTATTCCGGCGGCTATTGCTGGGGAGCGATAGTGATCGGCGCCGTGGCAGCGAACCGCGGCGAGCCGGCCGTGGTGAC GGTAGCTTGCACCGTATAGT
Product: putative amino acid transporter
Products: NA
Alternate protein names: Regulatory Protein LysR Family Signature Domain Protein; Integral Membrane Protein; Regulatory Protein
Number of amino acids: Translated: 623; Mature: 623
Protein sequence:
>623_residues MKFSEWLLADLRVPEGIQSPAHPVHPWWRVMCLTGVDYFSTLGYQPGIAYLAAGLLSPLATLILVLVTLFGALPVYSRVA AASPNGQGSIGMLERLFPKWSGKVFVLILLGFATTDFVITMTLSAADAAAHVVQNPFVPDWMRSQMGITLILLAILGSIF MMGFKEAIGVAVILVALYLSLNLVVTAIALRRIFTHPELIPHWKSALFATHGSPWTMLGISLLLFPKLALGLSGFETGVA VMPLVKAEDLAARIRNTRKLLFTAAAIMSVFLMATSFATALLIEPEKFREGGEANGRALAYLAHRYGGGAFGSLYDVSTI LILAFAGASAMAGLLNLIPRYLPRFGMAPEWARASRPLVLVFMAVAFAVTLLFRASVDAQGGAYATGVLVLITSGATAVT LSVWNSRARWPFLAIAVIFVYTTAMNIHERPEGIKIASFFIGSMILTSLISRALRSTELRICAVEFDHAARALLAADEDQ LIRVIARRPRPAESEQLLDEADRAMRFNHCLEPNDQLYFLEVERGDASEFTDTLRVTGERVGAHAVLRASSPVVANAIAA LLIELERTTGKLPHAYFSWTEGNPVINLIRFLILGEGDVAPICHEVLRRAVPDPAHRPIIHVT
Sequences:
>Translated_623_residues MKFSEWLLADLRVPEGIQSPAHPVHPWWRVMCLTGVDYFSTLGYQPGIAYLAAGLLSPLATLILVLVTLFGALPVYSRVA AASPNGQGSIGMLERLFPKWSGKVFVLILLGFATTDFVITMTLSAADAAAHVVQNPFVPDWMRSQMGITLILLAILGSIF MMGFKEAIGVAVILVALYLSLNLVVTAIALRRIFTHPELIPHWKSALFATHGSPWTMLGISLLLFPKLALGLSGFETGVA VMPLVKAEDLAARIRNTRKLLFTAAAIMSVFLMATSFATALLIEPEKFREGGEANGRALAYLAHRYGGGAFGSLYDVSTI LILAFAGASAMAGLLNLIPRYLPRFGMAPEWARASRPLVLVFMAVAFAVTLLFRASVDAQGGAYATGVLVLITSGATAVT LSVWNSRARWPFLAIAVIFVYTTAMNIHERPEGIKIASFFIGSMILTSLISRALRSTELRICAVEFDHAARALLAADEDQ LIRVIARRPRPAESEQLLDEADRAMRFNHCLEPNDQLYFLEVERGDASEFTDTLRVTGERVGAHAVLRASSPVVANAIAA LLIELERTTGKLPHAYFSWTEGNPVINLIRFLILGEGDVAPICHEVLRRAVPDPAHRPIIHVT >Mature_623_residues MKFSEWLLADLRVPEGIQSPAHPVHPWWRVMCLTGVDYFSTLGYQPGIAYLAAGLLSPLATLILVLVTLFGALPVYSRVA AASPNGQGSIGMLERLFPKWSGKVFVLILLGFATTDFVITMTLSAADAAAHVVQNPFVPDWMRSQMGITLILLAILGSIF MMGFKEAIGVAVILVALYLSLNLVVTAIALRRIFTHPELIPHWKSALFATHGSPWTMLGISLLLFPKLALGLSGFETGVA VMPLVKAEDLAARIRNTRKLLFTAAAIMSVFLMATSFATALLIEPEKFREGGEANGRALAYLAHRYGGGAFGSLYDVSTI LILAFAGASAMAGLLNLIPRYLPRFGMAPEWARASRPLVLVFMAVAFAVTLLFRASVDAQGGAYATGVLVLITSGATAVT LSVWNSRARWPFLAIAVIFVYTTAMNIHERPEGIKIASFFIGSMILTSLISRALRSTELRICAVEFDHAARALLAADEDQ LIRVIARRPRPAESEQLLDEADRAMRFNHCLEPNDQLYFLEVERGDASEFTDTLRVTGERVGAHAVLRASSPVVANAIAA LLIELERTTGKLPHAYFSWTEGNPVINLIRFLILGEGDVAPICHEVLRRAVPDPAHRPIIHVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67766; Mature: 67766
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSEWLLADLRVPEGIQSPAHPVHPWWRVMCLTGVDYFSTLGYQPGIAYLAAGLLSPLA CCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH TLILVLVTLFGALPVYSRVAAASPNGQGSIGMLERLFPKWSGKVFVLILLGFATTDFVIT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEHHHHHHHHCEEEE MTLSAADAAAHVVQNPFVPDWMRSQMGITLILLAILGSIFMMGFKEAIGVAVILVALYLS EEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNLVVTAIALRRIFTHPELIPHWKSALFATHGSPWTMLGISLLLFPKLALGLSGFETGVA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHH VMPLVKAEDLAARIRNTRKLLFTAAAIMSVFLMATSFATALLIEPEKFREGGEANGRALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHCCCCCCCCCHH YLAHRYGGGAFGSLYDVSTILILAFAGASAMAGLLNLIPRYLPRFGMAPEWARASRPLVL HHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHH VFMAVAFAVTLLFRASVDAQGGAYATGVLVLITSGATAVTLSVWNSRARWPFLAIAVIFV HHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHH YTTAMNIHERPEGIKIASFFIGSMILTSLISRALRSTELRICAVEFDHAARALLAADEDQ HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHCCHHH LIRVIARRPRPAESEQLLDEADRAMRFNHCLEPNDQLYFLEVERGDASEFTDTLRVTGER HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH VGAHAVLRASSPVVANAIAALLIELERTTGKLPHAYFSWTEGNPVINLIRFLILGEGDVA HCHHHEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCC PICHEVLRRAVPDPAHRPIIHVT HHHHHHHHHHCCCCCCCCEEEEC >Mature Secondary Structure MKFSEWLLADLRVPEGIQSPAHPVHPWWRVMCLTGVDYFSTLGYQPGIAYLAAGLLSPLA CCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH TLILVLVTLFGALPVYSRVAAASPNGQGSIGMLERLFPKWSGKVFVLILLGFATTDFVIT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEHHHHHHHHCEEEE MTLSAADAAAHVVQNPFVPDWMRSQMGITLILLAILGSIFMMGFKEAIGVAVILVALYLS EEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNLVVTAIALRRIFTHPELIPHWKSALFATHGSPWTMLGISLLLFPKLALGLSGFETGVA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHH VMPLVKAEDLAARIRNTRKLLFTAAAIMSVFLMATSFATALLIEPEKFREGGEANGRALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHCCCCCCCCCHH YLAHRYGGGAFGSLYDVSTILILAFAGASAMAGLLNLIPRYLPRFGMAPEWARASRPLVL HHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHH VFMAVAFAVTLLFRASVDAQGGAYATGVLVLITSGATAVTLSVWNSRARWPFLAIAVIFV HHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHH YTTAMNIHERPEGIKIASFFIGSMILTSLISRALRSTELRICAVEFDHAARALLAADEDQ HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHCCHHH LIRVIARRPRPAESEQLLDEADRAMRFNHCLEPNDQLYFLEVERGDASEFTDTLRVTGER HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH VGAHAVLRASSPVVANAIAALLIELERTTGKLPHAYFSWTEGNPVINLIRFLILGEGDVA HCHHHEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCC PICHEVLRRAVPDPAHRPIIHVT HHHHHHHHHHCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA