| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620763
Identifier: 116620763
GI number: 116620763
Start: 2033154
End: 2036036
Strand: Reverse
Name: 116620763
Synonym: Acid_1644
Alternate gene names: NA
Gene position: 2036036-2033154 (Counterclockwise)
Preceding gene: 116620764
Following gene: 116620758
Centisome position: 20.43
GC content: 63.68
Gene sequence:
>2883_bases TTGCCTCGAATTCTAGCATTCCTCCTCCTCTCGCCGGCTCTCTTCGCCCAGACCGCGACACTACGCGGCGTGGTCACCGA CGAGAGTGCGGCACTTGTGCCGGGCGCGCGCGTGACTCTGCAAGGCCCCTCGGCGAAACATGCCGTCACCGATAACGCCG GGGCCTACAACTTCCCTGCCCTCACGCCCGGGGATTACACGGTCCAGGCAGCCGCTCCCAATCTCGCGCAGCCTCAGGCG GTGAAGATCACCCTGCGCAGCGGACCGCAGACGCTCAACCTCACGCTCGCCGTGGCGGCTATCTCCGAAAAGCTCACCGT AGCCGACACCTCCGCCCCCGCGCTCACCACCGATTCTTCCAACAACGCCAGCGCCGTCGTCCTCCGCGGCGCCGACCTTG AAGCCCTGTCCGACGATCCCGATGATCTCGCGGCTGACCTCTCCGCTCTCGCCGGCCCTTCCGCCGGCCCAAACGGCGGC TCGATCTTCGTCGATGGGTTCAGCGGCGGCCAGCTTCCGCCAAAGGAATCCATCCGCGAGATCCGTATCAACCAAAACCC CTTTTCACCCGAGTACGACAAGCTCGGCTACGGCAAAATCGAAATTTTCACCAAGCCTGGCTCCGATAAATACCGCGGCA CAGCCCAGTGGAATTTCGCGAACGATTTTTGGAACACGCGCAATCCCTACTCGCCCACCAAAGCGCCGTTCCTGCTGAAT GAATTCGAGGGCAACGCGGGCGGCCCGCTCACCAAAAAGTCCTCCTTCACCATCGACGCCCAGCGCAACATGGTCGATAA CGGCGCCATCACCAACGCCGTCACGCTCAATCCCCAAACCCTTGCGCCCCTGAGCTTCGCCGGGATCATCACCACCCCCG GCCGCTTCACCAACATCAGCCCGCGCGTGGATTATCAGCTCGGCGACAATAACACCCTGATGTTCCGCTACGGAATCACG CACTCCGACGTCCGCGACAACGGGATCGGCGGCTTCGACCTGGTTTCGCGCGGCTACCACTCACAGTTCACCAACCAGAC CGTGCAAGCCGCCGACACCATGCTGCTGGGTTCTACCGTCAACGAGATGCGTTTTCAATACTACCGGAGCGCCACGCAAG CGATCGCCAACAGCCTGGAGCCTGCGCTACTCGTGCTTCAATCCTTCAACGGCGGGGGCGCCGCGCAGGGACGCACCTTC GACACCCAGAACAGCTACGAGTTCCAGAACTACAGCTCACGATTGCAGGGCCGCCACTCCTGGCGATTCGGCGTGCGGTT GCGCGCCCAGACCGATGACAGTGTCTCGCCGAATAACTTCAATGGCGCTTTCACTTTCGGCGGCGGAGCGCTCGCACCGG TGCTCGATTCGCAGAACCGCCCTACCGGCGAGGTCGCGCCGATCACGTCCATTGAGCGGTATCGCCGCACGCTGCTCTTC CAGCAGCTCGGCGATACGCCCGAGCAGATACGCCTGCTCGGCGGCGGCGCCACCCAGTTCACCATGAACACCGGCACGCC CGCGCTCTCCGTGCACCAGGTAGACGCCGGCTTCTTCGTCGGCGACGAATGGCGTATGCGCCCCAATTTCACGGTCAATC TCGGCCTCCGGTACGAGACCCAGACCAACATCAGCGACCACCGCGATTTCGCGCCGCGCGTTGCCTTCGCGTGGGCGCCC GGCGGTTCGGGGCAGAAGCGCGCCAAGACCGTCCTGCGCGCCGGCTTCGGCATCTTTTACGACCGCTTTGCCCTCGCCAA CACGCTCGCCGCCAGCCGCTTCAACGGCCTCGTGCAGCAGCAGCTCGTCGTGCCCAATCCGGATTTCTACCCCAACGTGC CGGCGCCCGCCACGCTCGCCGCCTTTCAATCCACCCAGGTCATTCAGGAAATCAGTGCGCACATGCGCGCCCCATACATT CTGCAATCGGCCTTCACGCTGGAGCGGCAACTACCGGCCAACACGACCATGGCGGTTACATATACCACCTCGCATGGCCT GCACCTCTTCCGCTCGCAGGACATCAACGCGCCGCTCAGGGGCGTCTTCCCACTGGGCCATCCAGGACCGCTGGATCTGA TGGAATCCTCCGGCCTCTATAACCAGAACCAGGTGATCGCCAACGTCAACTCCAAGCTCAACGCCGGCCTCTCCCTGTTT GGGTTCTACGTGTTCAACCGCGCCCACAGCAACACGGATGGCATCGGCACGTTCCCCGCTAACCCCTATAACTTCACCGG CGAGTACGGCCCCGCTTCCACCGACGTGCACCACCGCTTCACCATCGGCGGCTCCATCAATTTAAAGTGGTCGCTTCGGA TCAGCCCGTTCGTGGTGGCGCAATCCGCCGCGCCCTTCGATATCACCGCCGGCAGCGATCTCTACGGCACCACGCTCTTC AACGGACGTCCCGGCATTGCCGCCGACCCCACGCGACCCGGCCTGATATCGACATCCTACGGCCTGCTCGATCCCAATCC GTCGCCTGGCGAGCGCCTGATCCCTCGCAACTACGGCCGCGGTCCCGGGCAGTTCAATTTCAACCTGCGCATAGCCAAGA CCATCGGCTTCGGCCGTGAGCGAGGAGGGTCCGCCAGCGGATCTGGCGCTCCTTCCGGACAGGGCGCGGCCCTCGCCGCC GCGGGCGGGCGCGGGCTGGGAAGCCTCATCGGCGCCGCGTCAACCACGCGCCGCTACAACCTCAGCATCGGCATCTCGAT ACGCAATCTCTTCAACCACACGAATCCTGGCCCCATCATCGGCAACATCACCTCGCCCTACTTCGGCTCGGCCAACCAGA TCGCCGGCAGCCAAAATGGCGAAGGCTTCTACGAGACCGCCAACAACCGCCGCCTCGAATCGCAGATAAAGTTTACGTTC TAG
Upstream 100 bases:
>100_bases CCTCTCTCCACGCTGAACCAGAAAATCAAACGCCTGGACATCAAAATTCGAAAAAAATCCGAAGGCTGAAACTCGCATCC TGGTTTGATAGCCTTAAATA
Downstream 100 bases:
>100_bases GATTCGATGCTACTTCGCGGGCGCCGAACCGGTGGCTGGGTTGTACTTCGGATTATCGGGATTTTGCGGCTGATCGATGG GGTCTACGCGGGGCAGCGGT
Product: CnaB domain-containing protein
Products: NA
Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Receptor; Cna B-Type Protein
Number of amino acids: Translated: 960; Mature: 959
Protein sequence:
>960_residues MPRILAFLLLSPALFAQTATLRGVVTDESAALVPGARVTLQGPSAKHAVTDNAGAYNFPALTPGDYTVQAAAPNLAQPQA VKITLRSGPQTLNLTLAVAAISEKLTVADTSAPALTTDSSNNASAVVLRGADLEALSDDPDDLAADLSALAGPSAGPNGG SIFVDGFSGGQLPPKESIREIRINQNPFSPEYDKLGYGKIEIFTKPGSDKYRGTAQWNFANDFWNTRNPYSPTKAPFLLN EFEGNAGGPLTKKSSFTIDAQRNMVDNGAITNAVTLNPQTLAPLSFAGIITTPGRFTNISPRVDYQLGDNNTLMFRYGIT HSDVRDNGIGGFDLVSRGYHSQFTNQTVQAADTMLLGSTVNEMRFQYYRSATQAIANSLEPALLVLQSFNGGGAAQGRTF DTQNSYEFQNYSSRLQGRHSWRFGVRLRAQTDDSVSPNNFNGAFTFGGGALAPVLDSQNRPTGEVAPITSIERYRRTLLF QQLGDTPEQIRLLGGGATQFTMNTGTPALSVHQVDAGFFVGDEWRMRPNFTVNLGLRYETQTNISDHRDFAPRVAFAWAP GGSGQKRAKTVLRAGFGIFYDRFALANTLAASRFNGLVQQQLVVPNPDFYPNVPAPATLAAFQSTQVIQEISAHMRAPYI LQSAFTLERQLPANTTMAVTYTTSHGLHLFRSQDINAPLRGVFPLGHPGPLDLMESSGLYNQNQVIANVNSKLNAGLSLF GFYVFNRAHSNTDGIGTFPANPYNFTGEYGPASTDVHHRFTIGGSINLKWSLRISPFVVAQSAAPFDITAGSDLYGTTLF NGRPGIAADPTRPGLISTSYGLLDPNPSPGERLIPRNYGRGPGQFNFNLRIAKTIGFGRERGGSASGSGAPSGQGAALAA AGGRGLGSLIGAASTTRRYNLSIGISIRNLFNHTNPGPIIGNITSPYFGSANQIAGSQNGEGFYETANNRRLESQIKFTF
Sequences:
>Translated_960_residues MPRILAFLLLSPALFAQTATLRGVVTDESAALVPGARVTLQGPSAKHAVTDNAGAYNFPALTPGDYTVQAAAPNLAQPQA VKITLRSGPQTLNLTLAVAAISEKLTVADTSAPALTTDSSNNASAVVLRGADLEALSDDPDDLAADLSALAGPSAGPNGG SIFVDGFSGGQLPPKESIREIRINQNPFSPEYDKLGYGKIEIFTKPGSDKYRGTAQWNFANDFWNTRNPYSPTKAPFLLN EFEGNAGGPLTKKSSFTIDAQRNMVDNGAITNAVTLNPQTLAPLSFAGIITTPGRFTNISPRVDYQLGDNNTLMFRYGIT HSDVRDNGIGGFDLVSRGYHSQFTNQTVQAADTMLLGSTVNEMRFQYYRSATQAIANSLEPALLVLQSFNGGGAAQGRTF DTQNSYEFQNYSSRLQGRHSWRFGVRLRAQTDDSVSPNNFNGAFTFGGGALAPVLDSQNRPTGEVAPITSIERYRRTLLF QQLGDTPEQIRLLGGGATQFTMNTGTPALSVHQVDAGFFVGDEWRMRPNFTVNLGLRYETQTNISDHRDFAPRVAFAWAP GGSGQKRAKTVLRAGFGIFYDRFALANTLAASRFNGLVQQQLVVPNPDFYPNVPAPATLAAFQSTQVIQEISAHMRAPYI LQSAFTLERQLPANTTMAVTYTTSHGLHLFRSQDINAPLRGVFPLGHPGPLDLMESSGLYNQNQVIANVNSKLNAGLSLF GFYVFNRAHSNTDGIGTFPANPYNFTGEYGPASTDVHHRFTIGGSINLKWSLRISPFVVAQSAAPFDITAGSDLYGTTLF NGRPGIAADPTRPGLISTSYGLLDPNPSPGERLIPRNYGRGPGQFNFNLRIAKTIGFGRERGGSASGSGAPSGQGAALAA AGGRGLGSLIGAASTTRRYNLSIGISIRNLFNHTNPGPIIGNITSPYFGSANQIAGSQNGEGFYETANNRRLESQIKFTF >Mature_959_residues PRILAFLLLSPALFAQTATLRGVVTDESAALVPGARVTLQGPSAKHAVTDNAGAYNFPALTPGDYTVQAAAPNLAQPQAV KITLRSGPQTLNLTLAVAAISEKLTVADTSAPALTTDSSNNASAVVLRGADLEALSDDPDDLAADLSALAGPSAGPNGGS IFVDGFSGGQLPPKESIREIRINQNPFSPEYDKLGYGKIEIFTKPGSDKYRGTAQWNFANDFWNTRNPYSPTKAPFLLNE FEGNAGGPLTKKSSFTIDAQRNMVDNGAITNAVTLNPQTLAPLSFAGIITTPGRFTNISPRVDYQLGDNNTLMFRYGITH SDVRDNGIGGFDLVSRGYHSQFTNQTVQAADTMLLGSTVNEMRFQYYRSATQAIANSLEPALLVLQSFNGGGAAQGRTFD TQNSYEFQNYSSRLQGRHSWRFGVRLRAQTDDSVSPNNFNGAFTFGGGALAPVLDSQNRPTGEVAPITSIERYRRTLLFQ QLGDTPEQIRLLGGGATQFTMNTGTPALSVHQVDAGFFVGDEWRMRPNFTVNLGLRYETQTNISDHRDFAPRVAFAWAPG GSGQKRAKTVLRAGFGIFYDRFALANTLAASRFNGLVQQQLVVPNPDFYPNVPAPATLAAFQSTQVIQEISAHMRAPYIL QSAFTLERQLPANTTMAVTYTTSHGLHLFRSQDINAPLRGVFPLGHPGPLDLMESSGLYNQNQVIANVNSKLNAGLSLFG FYVFNRAHSNTDGIGTFPANPYNFTGEYGPASTDVHHRFTIGGSINLKWSLRISPFVVAQSAAPFDITAGSDLYGTTLFN GRPGIAADPTRPGLISTSYGLLDPNPSPGERLIPRNYGRGPGQFNFNLRIAKTIGFGRERGGSASGSGAPSGQGAALAAA GGRGLGSLIGAASTTRRYNLSIGISIRNLFNHTNPGPIIGNITSPYFGSANQIAGSQNGEGFYETANNRRLESQIKFTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102842; Mature: 102711
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRILAFLLLSPALFAQTATLRGVVTDESAALVPGARVTLQGPSAKHAVTDNAGAYNFPA CCHHHHHHHHCHHHHHHHHHEEEEEECCCCEECCCCEEEEECCCCCCEECCCCCCCCCCC LTPGDYTVQAAAPNLAQPQAVKITLRSGPQTLNLTLAVAAISEKLTVADTSAPALTTDSS CCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCEEEECCC NNASAVVLRGADLEALSDDPDDLAADLSALAGPSAGPNGGSIFVDGFSGGQLPPKESIRE CCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHE IRINQNPFSPEYDKLGYGKIEIFTKPGSDKYRGTAQWNFANDFWNTRNPYSPTKAPFLLN EEECCCCCCCCHHHCCCCEEEEEECCCCCCCCCEEEECCHHHCCCCCCCCCCCCCCEEEE EFEGNAGGPLTKKSSFTIDAQRNMVDNGAITNAVTLNPQTLAPLSFAGIITTPGRFTNIS ECCCCCCCCCCCCCCEEEEHHCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCC PRVDYQLGDNNTLMFRYGITHSDVRDNGIGGFDLVSRGYHSQFTNQTVQAADTMLLGSTV CEEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHCCHHHHHCCCHHHHHHHEEECCCH NEMRFQYYRSATQAIANSLEPALLVLQSFNGGGAAQGRTFDTQNSYEFQNYSSRLQGRHS HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEECCCCCCCHHHHHHHHCCCCC WRFGVRLRAQTDDSVSPNNFNGAFTFGGGALAPVLDSQNRPTGEVAPITSIERYRRTLLF EEEEEEEEECCCCCCCCCCCCEEEEECCCCEEHHCCCCCCCCCCCCCCHHHHHHHHHHHH QQLGDTPEQIRLLGGGATQFTMNTGTPALSVHQVDAGFFVGDEWRMRPNFTVNLGLRYET HHHCCCHHHEEEEECCCEEEEECCCCCEEEEEEECCCEEECCCEEECCCEEEEEEEEEEC QTNISDHRDFAPRVAFAWAPGGSGQKRAKTVLRAGFGIFYDRFALANTLAASRFNGLVQQ CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLVVPNPDFYPNVPAPATLAAFQSTQVIQEISAHMRAPYILQSAFTLERQLPANTTMAVT EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEE YTTSHGLHLFRSQDINAPLRGVFPLGHPGPLDLMESSGLYNQNQVIANVNSKLNAGLSLF EECCCCEEEEECCCCCCCHHEECCCCCCCCCHHHHCCCCCCCCEEEEECCCCHHCCHHHE GFYVFNRAHSNTDGIGTFPANPYNFTGEYGPASTDVHHRFTIGGSINLKWSLRISPFVVA EEHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEEECEEEEE QSAAPFDITAGSDLYGTTLFNGRPGIAADPTRPGLISTSYGLLDPNPSPGERLIPRNYGR CCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC GPGQFNFNLRIAKTIGFGRERGGSASGSGAPSGQGAALAAAGGRGLGSLIGAASTTRRYN CCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCEEEE LSIGISIRNLFNHTNPGPIIGNITSPYFGSANQIAGSQNGEGFYETANNRRLESQIKFTF EEEEEEEHHHHCCCCCCCEEECCCCCCCCCHHHCCCCCCCCCCEECCCCCEEECEEEECC >Mature Secondary Structure PRILAFLLLSPALFAQTATLRGVVTDESAALVPGARVTLQGPSAKHAVTDNAGAYNFPA CHHHHHHHHCHHHHHHHHHEEEEEECCCCEECCCCEEEEECCCCCCEECCCCCCCCCCC LTPGDYTVQAAAPNLAQPQAVKITLRSGPQTLNLTLAVAAISEKLTVADTSAPALTTDSS CCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCEEEECCC NNASAVVLRGADLEALSDDPDDLAADLSALAGPSAGPNGGSIFVDGFSGGQLPPKESIRE CCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHE IRINQNPFSPEYDKLGYGKIEIFTKPGSDKYRGTAQWNFANDFWNTRNPYSPTKAPFLLN EEECCCCCCCCHHHCCCCEEEEEECCCCCCCCCEEEECCHHHCCCCCCCCCCCCCCEEEE EFEGNAGGPLTKKSSFTIDAQRNMVDNGAITNAVTLNPQTLAPLSFAGIITTPGRFTNIS ECCCCCCCCCCCCCCEEEEHHCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCC PRVDYQLGDNNTLMFRYGITHSDVRDNGIGGFDLVSRGYHSQFTNQTVQAADTMLLGSTV CEEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHCCHHHHHCCCHHHHHHHEEECCCH NEMRFQYYRSATQAIANSLEPALLVLQSFNGGGAAQGRTFDTQNSYEFQNYSSRLQGRHS HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEECCCCCCCHHHHHHHHCCCCC WRFGVRLRAQTDDSVSPNNFNGAFTFGGGALAPVLDSQNRPTGEVAPITSIERYRRTLLF EEEEEEEEECCCCCCCCCCCCEEEEECCCCEEHHCCCCCCCCCCCCCCHHHHHHHHHHHH QQLGDTPEQIRLLGGGATQFTMNTGTPALSVHQVDAGFFVGDEWRMRPNFTVNLGLRYET HHHCCCHHHEEEEECCCEEEEECCCCCEEEEEEECCCEEECCCEEECCCEEEEEEEEEEC QTNISDHRDFAPRVAFAWAPGGSGQKRAKTVLRAGFGIFYDRFALANTLAASRFNGLVQQ CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLVVPNPDFYPNVPAPATLAAFQSTQVIQEISAHMRAPYILQSAFTLERQLPANTTMAVT EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEE YTTSHGLHLFRSQDINAPLRGVFPLGHPGPLDLMESSGLYNQNQVIANVNSKLNAGLSLF EECCCCEEEEECCCCCCCHHEECCCCCCCCCHHHHCCCCCCCCEEEEECCCCHHCCHHHE GFYVFNRAHSNTDGIGTFPANPYNFTGEYGPASTDVHHRFTIGGSINLKWSLRISPFVVA EEHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEEECEEEEE QSAAPFDITAGSDLYGTTLFNGRPGIAADPTRPGLISTSYGLLDPNPSPGERLIPRNYGR CCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC GPGQFNFNLRIAKTIGFGRERGGSASGSGAPSGQGAALAAAGGRGLGSLIGAASTTRRYN CCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCEEEE LSIGISIRNLFNHTNPGPIIGNITSPYFGSANQIAGSQNGEGFYETANNRRLESQIKFTF EEEEEEEHHHHCCCCCCCEEECCCCCCCCCHHHCCCCCCCCCCEECCCCCEEECEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA