| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is quiA [H]
Identifier: 116620758
GI number: 116620758
Start: 2022521
End: 2024920
Strand: Reverse
Name: quiA [H]
Synonym: Acid_1639
Alternate gene names: 116620758
Gene position: 2024920-2022521 (Counterclockwise)
Preceding gene: 116620763
Following gene: 116620755
Centisome position: 20.32
GC content: 62.29
Gene sequence:
>2400_bases ATGGGGAATGAGGATTTGGAAAGCTTACTGGCCCGGGCGATTCCCCGGGCCGCGTGTATTTTCGGGGTTCTGCTCGCCGG CGCTACCTTCACCAGCGCCGCCACTTTGCCGGAAGGCCCGGGGAAAGCGGAGACCACTCGGGTTTGCGGCAAGTGTCACT CGCTGGATCAGACAATATCGCTGCGGCAGGGACGGGCGGCCTGGCAGGAGACCATTTCCAAGATGGTCAACCTCGGCGCC GAAGGCAGCCAATCCGAGGTTGCCGCGATCCTCAATTATCTGGTGAAGAACTTCGGCTCTGCGAATGCGAATCCCGCAGC CGAGGGCGCCATCGCCCCGACTGCGCCTCCGGAACGCACTGAAACGGCAATGCCCGACGGCGCACGGCCGATCCGGAACA ATGCCGCGCCCTTCACCACCGGTCCTCCGCTTCCGGCCGCCAGGGAGTGGCCTACCTATGGCCACGATCCCGGCGGCCAA CGCTACTCGCCTTTGACGGAGCTAACGCCTGAAAATGTCGGGCGCCTAAAAGTTGCGTGGACATATCACATGAGGCCTGC CGGCTTCACCGGCAGCGGTGGCGGATTCCCAACGATGGAGGGCCGCGGGCCTGGAGGCGCTGTCGGCGACACACCCGAGT CACCGGAAGGCAGCGGGCGCGGCGCGGGGCGCGGCGGGCGTGGTGGCTCCGGCTTCCGCCCCAGCGGTGACACGCCTTTG GTAAAGGGCGGCATCATGTACATGGCGACGCCGTATTCTCGTGTGGTCGCCGTGGATCCCGTGACGGGAGGGGAACTCTG GTCGTTTTCACTTCGTTCGGGAAACCCCTCGACGCGCGGCCTGGAATTCTGGGCCGGTGATGGGCACACGCCCGCGCAGA TCGTCTTCGGCTCAAGCGACGGGAAGCTCTATTCAATCGACGCACAAACCGGAAAGCCGAACCCTGCGTTTGGCGATAAC GGGGTCGTGAATCTGAACACCGATGCCATTATGCACGGACTGCCCGGCCGCAACAGCCTGTCGTCTCCGCCGATCGTTTA CAAGAACTTCGTCATCACCGGTGGCACGACGCAAGAGAATCCGCCTCACGGCCCGGCAGGAGACGTCCGCGCCTGGGACA TGCGCACAGGGAAGCTGGCATGGACCTTCCACTCGGTCCCGCAGAAGGGCGAGAAGTTCAACAACACCTGGGCGGGCGAG AGTTGGAAGAATCGATCCGGCGTGAACGTCTGGGGTTTCCTTACCGTGGATGAGAAGCGCGGGATCGTTTACATGCCGTT CGGCGCACCTTCTGTCGATCAGTACGGCGGCGATCGCGCGGGCGACAACCTCTTCAGCACGAGCCTGGTTGCAGCCGACG CCAACACAGGAAAATACTTGTGGCACTTTCAGGTTGTGCATCATGACATCTGGGATGCCGACATGACAGGTGCGCCCGCG TTGATTGATGTCAAGCGAGGCGGTAAAACAATTCCCGCGGTGGCCGCGATGGATAAGGTCGGAATGGTGTTTCTGCTGGA TCGGGTAACTGGCAAGCCGATTTACGGCGTCGAAGAACGGCCGGTGCCGCAAAGCGAAGTACCACTTGAGCGGACCGCGA AAACGCAGCCGTTCCCTATAAAGCCTCCGCCCCTGGCGCGAATGATATTCAATAAGGCTGACCTCGCGACCGTCACGCCC GAATTAGAAGCTGCATGCAGGAAACTGGTCGAAGGCGTAGAGACTGGAGGGCCGTTCCTTCCGCCCAGCTATAACCATTT GCGCGTGCAGTTCCCGGGAAATCATGGCGGGGTGAATTGGGGCGGAACTTCGTTCGATCCGCAGCTTGGATATCTCTTCG CGAATGTCAACGAATTGGGCCAACTCTCGGGGCTACGCGACCACGATCCAACGAGCGGTCCGGCGATGGCTAATGGCCAG GGCAACCGCGTCGACCCGGGCGGCCCGTACGAAGGAGTGCCAGGTGGCGGGCGGTTCAGCATTAAGGGCCCCACTTCCCA GCAGTTGCCCTGCCAGCAGCCGCCCTGGGGTGAGTTGGCCGCGGTTGATGTGAATACGGGCGACATTGCGTGGAAGGTGT CGCTGGGAGTGACAGAGAGCTTGCCGGAGGGAAAGCAGAACACCGGACGGCCGGGTAATGGGGGCACGATCGTGACTGCC GGCGGACTTGTGTTCGTCGGCGCCACAGACGACGCGCGTTTCCGCGCCTTCGAAGCCAAGACCGGGAAGGAGCTTTGGAC AGTGAAACTGCCCGGCGCCGCGGAAGCAACTCCCATCACCTACCAGGGCCGCGACGGACGACAATATGTTGTGATTACGG CGACCGGCGGAGGCTTTTTCAATAACCCGGTCACTGGAGATAGCGTCATCGCGTTCGCGCTGGATGGTCCGCAACAGTAG
Upstream 100 bases:
>100_bases CTAGCCTCGTCCGCGGCGACCGAATATGCAGTAGCATGTATGCGAACGCTATAGGGCCGCTGTCCCTGCGCGTAAATTGT CACGTTCGAGAGGGTGATCC
Downstream 100 bases:
>100_bases CATCTCTGGCGACGAGCCACGGGAGTTGGGACGAAGCTGCAAATCTTGGCCGGCCAATCCGGACTGCGACGCCGGGTGAG AAGTGCGCGAGCGGGAGGCC
Product: quinoprotein glucose dehydrogenase
Products: NA
Alternate protein names: NAD(P)-independent quinate dehydrogenase [H]
Number of amino acids: Translated: 799; Mature: 798
Protein sequence:
>799_residues MGNEDLESLLARAIPRAACIFGVLLAGATFTSAATLPEGPGKAETTRVCGKCHSLDQTISLRQGRAAWQETISKMVNLGA EGSQSEVAAILNYLVKNFGSANANPAAEGAIAPTAPPERTETAMPDGARPIRNNAAPFTTGPPLPAAREWPTYGHDPGGQ RYSPLTELTPENVGRLKVAWTYHMRPAGFTGSGGGFPTMEGRGPGGAVGDTPESPEGSGRGAGRGGRGGSGFRPSGDTPL VKGGIMYMATPYSRVVAVDPVTGGELWSFSLRSGNPSTRGLEFWAGDGHTPAQIVFGSSDGKLYSIDAQTGKPNPAFGDN GVVNLNTDAIMHGLPGRNSLSSPPIVYKNFVITGGTTQENPPHGPAGDVRAWDMRTGKLAWTFHSVPQKGEKFNNTWAGE SWKNRSGVNVWGFLTVDEKRGIVYMPFGAPSVDQYGGDRAGDNLFSTSLVAADANTGKYLWHFQVVHHDIWDADMTGAPA LIDVKRGGKTIPAVAAMDKVGMVFLLDRVTGKPIYGVEERPVPQSEVPLERTAKTQPFPIKPPPLARMIFNKADLATVTP ELEAACRKLVEGVETGGPFLPPSYNHLRVQFPGNHGGVNWGGTSFDPQLGYLFANVNELGQLSGLRDHDPTSGPAMANGQ GNRVDPGGPYEGVPGGGRFSIKGPTSQQLPCQQPPWGELAAVDVNTGDIAWKVSLGVTESLPEGKQNTGRPGNGGTIVTA GGLVFVGATDDARFRAFEAKTGKELWTVKLPGAAEATPITYQGRDGRQYVVITATGGGFFNNPVTGDSVIAFALDGPQQ
Sequences:
>Translated_799_residues MGNEDLESLLARAIPRAACIFGVLLAGATFTSAATLPEGPGKAETTRVCGKCHSLDQTISLRQGRAAWQETISKMVNLGA EGSQSEVAAILNYLVKNFGSANANPAAEGAIAPTAPPERTETAMPDGARPIRNNAAPFTTGPPLPAAREWPTYGHDPGGQ RYSPLTELTPENVGRLKVAWTYHMRPAGFTGSGGGFPTMEGRGPGGAVGDTPESPEGSGRGAGRGGRGGSGFRPSGDTPL VKGGIMYMATPYSRVVAVDPVTGGELWSFSLRSGNPSTRGLEFWAGDGHTPAQIVFGSSDGKLYSIDAQTGKPNPAFGDN GVVNLNTDAIMHGLPGRNSLSSPPIVYKNFVITGGTTQENPPHGPAGDVRAWDMRTGKLAWTFHSVPQKGEKFNNTWAGE SWKNRSGVNVWGFLTVDEKRGIVYMPFGAPSVDQYGGDRAGDNLFSTSLVAADANTGKYLWHFQVVHHDIWDADMTGAPA LIDVKRGGKTIPAVAAMDKVGMVFLLDRVTGKPIYGVEERPVPQSEVPLERTAKTQPFPIKPPPLARMIFNKADLATVTP ELEAACRKLVEGVETGGPFLPPSYNHLRVQFPGNHGGVNWGGTSFDPQLGYLFANVNELGQLSGLRDHDPTSGPAMANGQ GNRVDPGGPYEGVPGGGRFSIKGPTSQQLPCQQPPWGELAAVDVNTGDIAWKVSLGVTESLPEGKQNTGRPGNGGTIVTA GGLVFVGATDDARFRAFEAKTGKELWTVKLPGAAEATPITYQGRDGRQYVVITATGGGFFNNPVTGDSVIAFALDGPQQ >Mature_798_residues GNEDLESLLARAIPRAACIFGVLLAGATFTSAATLPEGPGKAETTRVCGKCHSLDQTISLRQGRAAWQETISKMVNLGAE GSQSEVAAILNYLVKNFGSANANPAAEGAIAPTAPPERTETAMPDGARPIRNNAAPFTTGPPLPAAREWPTYGHDPGGQR YSPLTELTPENVGRLKVAWTYHMRPAGFTGSGGGFPTMEGRGPGGAVGDTPESPEGSGRGAGRGGRGGSGFRPSGDTPLV KGGIMYMATPYSRVVAVDPVTGGELWSFSLRSGNPSTRGLEFWAGDGHTPAQIVFGSSDGKLYSIDAQTGKPNPAFGDNG VVNLNTDAIMHGLPGRNSLSSPPIVYKNFVITGGTTQENPPHGPAGDVRAWDMRTGKLAWTFHSVPQKGEKFNNTWAGES WKNRSGVNVWGFLTVDEKRGIVYMPFGAPSVDQYGGDRAGDNLFSTSLVAADANTGKYLWHFQVVHHDIWDADMTGAPAL IDVKRGGKTIPAVAAMDKVGMVFLLDRVTGKPIYGVEERPVPQSEVPLERTAKTQPFPIKPPPLARMIFNKADLATVTPE LEAACRKLVEGVETGGPFLPPSYNHLRVQFPGNHGGVNWGGTSFDPQLGYLFANVNELGQLSGLRDHDPTSGPAMANGQG NRVDPGGPYEGVPGGGRFSIKGPTSQQLPCQQPPWGELAAVDVNTGDIAWKVSLGVTESLPEGKQNTGRPGNGGTIVTAG GLVFVGATDDARFRAFEAKTGKELWTVKLPGAAEATPITYQGRDGRQYVVITATGGGFFNNPVTGDSVIAFALDGPQQ
Specific function: Can act either on quinate or on shikimate [H]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial PQQ dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=684, Percent_Identity=30.8479532163743, Blast_Score=292, Evalue=7e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017511 - InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: =1.1.99.25 [H]
Molecular weight: Translated: 84074; Mature: 83943
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNEDLESLLARAIPRAACIFGVLLAGATFTSAATLPEGPGKAETTRVCGKCHSLDQTIS CCHHHHHHHHHHHCHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHH LRQGRAAWQETISKMVNLGAEGSQSEVAAILNYLVKNFGSANANPAAEGAIAPTAPPERT HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ETAMPDGARPIRNNAAPFTTGPPLPAAREWPTYGHDPGGQRYSPLTELTPENVGRLKVAW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEE TYHMRPAGFTGSGGGFPTMEGRGPGGAVGDTPESPEGSGRGAGRGGRGGSGFRPSGDTPL EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE VKGGIMYMATPYSRVVAVDPVTGGELWSFSLRSGNPSTRGLEFWAGDGHTPAQIVFGSSD EECCEEEEECCCCEEEEECCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCEEEEEECCC GKLYSIDAQTGKPNPAFGDNGVVNLNTDAIMHGLPGRNSLSSPPIVYKNFVITGGTTQEN CEEEEEECCCCCCCCCCCCCCEEEECHHHHEECCCCCCCCCCCCEEEEEEEEECCCCCCC PPHGPAGDVRAWDMRTGKLAWTFHSVPQKGEKFNNTWAGESWKNRSGVNVWGFLTVDEKR CCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCC GIVYMPFGAPSVDQYGGDRAGDNLFSTSLVAADANTGKYLWHFQVVHHDIWDADMTGAPA CEEEEECCCCCHHHCCCCCCCCCHHEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCE LIDVKRGGKTIPAVAAMDKVGMVFLLDRVTGKPIYGVEERPVPQSEVPLERTAKTQPFPI EEEECCCCCCCCHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC KPPPLARMIFNKADLATVTPELEAACRKLVEGVETGGPFLPPSYNHLRVQFPGNHGGVNW CCCHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCC GGTSFDPQLGYLFANVNELGQLSGLRDHDPTSGPAMANGQGNRVDPGGPYEGVPGGGRFS CCCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEE IKGPTSQQLPCQQPPWGELAAVDVNTGDIAWKVSLGVTESLPEGKQNTGRPGNGGTIVTA ECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEE GGLVFVGATDDARFRAFEAKTGKELWTVKLPGAAEATPITYQGRDGRQYVVITATGGGFF CCEEEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEECCCCCC NNPVTGDSVIAFALDGPQQ CCCCCCCCEEEEEECCCCC >Mature Secondary Structure GNEDLESLLARAIPRAACIFGVLLAGATFTSAATLPEGPGKAETTRVCGKCHSLDQTIS CHHHHHHHHHHHCHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHH LRQGRAAWQETISKMVNLGAEGSQSEVAAILNYLVKNFGSANANPAAEGAIAPTAPPERT HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ETAMPDGARPIRNNAAPFTTGPPLPAAREWPTYGHDPGGQRYSPLTELTPENVGRLKVAW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEE TYHMRPAGFTGSGGGFPTMEGRGPGGAVGDTPESPEGSGRGAGRGGRGGSGFRPSGDTPL EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE VKGGIMYMATPYSRVVAVDPVTGGELWSFSLRSGNPSTRGLEFWAGDGHTPAQIVFGSSD EECCEEEEECCCCEEEEECCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCEEEEEECCC GKLYSIDAQTGKPNPAFGDNGVVNLNTDAIMHGLPGRNSLSSPPIVYKNFVITGGTTQEN CEEEEEECCCCCCCCCCCCCCEEEECHHHHEECCCCCCCCCCCCEEEEEEEEECCCCCCC PPHGPAGDVRAWDMRTGKLAWTFHSVPQKGEKFNNTWAGESWKNRSGVNVWGFLTVDEKR CCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCC GIVYMPFGAPSVDQYGGDRAGDNLFSTSLVAADANTGKYLWHFQVVHHDIWDADMTGAPA CEEEEECCCCCHHHCCCCCCCCCHHEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCE LIDVKRGGKTIPAVAAMDKVGMVFLLDRVTGKPIYGVEERPVPQSEVPLERTAKTQPFPI EEEECCCCCCCCHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC KPPPLARMIFNKADLATVTPELEAACRKLVEGVETGGPFLPPSYNHLRVQFPGNHGGVNW CCCHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCC GGTSFDPQLGYLFANVNELGQLSGLRDHDPTSGPAMANGQGNRVDPGGPYEGVPGGGRFS CCCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEE IKGPTSQQLPCQQPPWGELAAVDVNTGDIAWKVSLGVTESLPEGKQNTGRPGNGGTIVTA ECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEE GGLVFVGATDDARFRAFEAKTGKELWTVKLPGAAEATPITYQGRDGRQYVVITATGGGFF CCEEEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEECCCCCC NNPVTGDSVIAFALDGPQQ CCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8002591; 7592351 [H]