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The map label for this gene is yfdC [H]

Identifier: 116620756

GI number: 116620756

Start: 2020629

End: 2021441

Strand: Direct

Name: yfdC [H]

Synonym: Acid_1637

Alternate gene names: 116620756

Gene position: 2020629-2021441 (Clockwise)

Preceding gene: 116620753

Following gene: 116620757

Centisome position: 20.28

GC content: 64.08

Gene sequence:

>813_bases
ATGGCGGAAACCAGTCAGCAGGAGCTTACAGAGGACCAGCAAAAAGAGGCCGAACAGCGCAGCTCAGTAACCGTGCATGT
GGTTCACGAGGCGGTGCGGCGCGAAGGCGAGGAGGAGCTGAAGCGGAGCTCGTCGGCGCTGGCATGGTCCGGGCTGGCGG
CCGGGCTCTCGATGGGCTTTTCGGCGATTGCGGAGGGCCTGATCCGGTCCAGGCTCCCGGACGCGCCGTGGCGGCCGCTG
CTCACGACAATGGGTTACAGCGCTGGATTTCTGCTGGTGGTACTGGGGCGGCAGCAGTTGTTCACCGAGAATACACTGAC
TCCCATGCTGCCGCTGTTCAGCAATCGCGATGGTGCCACGCTACGCAACGTGGCGCGTTTATGGGTGGTGGTACTGGCGG
CCAACATGGTGGGCGCGCTGGTGATCGCCTGGGTGCTGGCCGCCACGGGGGCGCTTCCTCCCGAGGTGAAACGGGCGCTC
TCGGATATCGCGCGTGAGTCGTCGGGGTTAGGATTCGGCGTGGTGCTGCTGCGCGGAGTGTTCGCGGGTTGGCTGATCGC
GATGCTGGTGTGGATGTTGCCGTTCGCAGAGGGCGCGCGCTTTTTTGTGGTGCTGGGGATGACGTGGCTGATCGGGCTGG
GCGGATTTTCTCACGTAGTCGCGGGCGCGGTGGAGGCGCTATATCTGGCAGTGAGCGGAGCGGGAACTTGGGAGGGAGCG
ATTCTGGGATACATCGTGCCGGCTCTAATCGGCAACATCCTGGGAGGGGTGACGCTGGTCGCGGTAATCAATCACGCGCA
GGTAGTGTCCTGA

Upstream 100 bases:

>100_bases
GATCGTGCGTTTTCCGGGGAGCGCGGTCCGCGTTCATCAAGCGCGGCGGTCGTGATGGGCAAAAAGAGGAAATCGAGGGC
ACAACCGAGCAGGAAGAGTC

Downstream 100 bases:

>100_bases
CAGCCCGATGTTTGATCCCTTCGCCAGGCTACGGTGTGCTTACCCACTCCCGATCTTCACCCTCCTCCCGACGGCCCTGG
CCAGTCTCGGTACTGCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MAETSQQELTEDQQKEAEQRSSVTVHVVHEAVRREGEEELKRSSSALAWSGLAAGLSMGFSAIAEGLIRSRLPDAPWRPL
LTTMGYSAGFLLVVLGRQQLFTENTLTPMLPLFSNRDGATLRNVARLWVVVLAANMVGALVIAWVLAATGALPPEVKRAL
SDIARESSGLGFGVVLLRGVFAGWLIAMLVWMLPFAEGARFFVVLGMTWLIGLGGFSHVVAGAVEALYLAVSGAGTWEGA
ILGYIVPALIGNILGGVTLVAVINHAQVVS

Sequences:

>Translated_270_residues
MAETSQQELTEDQQKEAEQRSSVTVHVVHEAVRREGEEELKRSSSALAWSGLAAGLSMGFSAIAEGLIRSRLPDAPWRPL
LTTMGYSAGFLLVVLGRQQLFTENTLTPMLPLFSNRDGATLRNVARLWVVVLAANMVGALVIAWVLAATGALPPEVKRAL
SDIARESSGLGFGVVLLRGVFAGWLIAMLVWMLPFAEGARFFVVLGMTWLIGLGGFSHVVAGAVEALYLAVSGAGTWEGA
ILGYIVPALIGNILGGVTLVAVINHAQVVS
>Mature_269_residues
AETSQQELTEDQQKEAEQRSSVTVHVVHEAVRREGEEELKRSSSALAWSGLAAGLSMGFSAIAEGLIRSRLPDAPWRPLL
TTMGYSAGFLLVVLGRQQLFTENTLTPMLPLFSNRDGATLRNVARLWVVVLAANMVGALVIAWVLAATGALPPEVKRALS
DIARESSGLGFGVVLLRGVFAGWLIAMLVWMLPFAEGARFFVVLGMTWLIGLGGFSHVVAGAVEALYLAVSGAGTWEGAI
LGYIVPALIGNILGGVTLVAVINHAQVVS

Specific function: Unknown

COG id: COG2116

COG function: function code P; Formate/nitrite family of transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788689, Length=251, Percent_Identity=39.4422310756972, Blast_Score=189, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000292 [H]

Pfam domain/function: PF01226 Form_Nir_trans [H]

EC number: NA

Molecular weight: Translated: 28676; Mature: 28545

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETSQQELTEDQQKEAEQRSSVTVHVVHEAVRREGEEELKRSSSALAWSGLAAGLSMGF
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SAIAEGLIRSRLPDAPWRPLLTTMGYSAGFLLVVLGRQQLFTENTLTPMLPLFSNRDGAT
HHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHH
LRNVARLWVVVLAANMVGALVIAWVLAATGALPPEVKRALSDIARESSGLGFGVVLLRGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
FAGWLIAMLVWMLPFAEGARFFVVLGMTWLIGLGGFSHVVAGAVEALYLAVSGAGTWEGA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHH
ILGYIVPALIGNILGGVTLVAVINHAQVVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AETSQQELTEDQQKEAEQRSSVTVHVVHEAVRREGEEELKRSSSALAWSGLAAGLSMGF
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SAIAEGLIRSRLPDAPWRPLLTTMGYSAGFLLVVLGRQQLFTENTLTPMLPLFSNRDGAT
HHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHH
LRNVARLWVVVLAANMVGALVIAWVLAATGALPPEVKRALSDIARESSGLGFGVVLLRGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
FAGWLIAMLVWMLPFAEGARFFVVLGMTWLIGLGGFSHVVAGAVEALYLAVSGAGTWEGA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHH
ILGYIVPALIGNILGGVTLVAVINHAQVVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]