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The map label for this gene is 116620753

Identifier: 116620753

GI number: 116620753

Start: 2018225

End: 2019202

Strand: Direct

Name: 116620753

Synonym: Acid_1634

Alternate gene names: NA

Gene position: 2018225-2019202 (Clockwise)

Preceding gene: 116620752

Following gene: 116620756

Centisome position: 20.25

GC content: 56.24

Gene sequence:

>978_bases
ATGAATTCAATAATTCAGTTTTCCGGCAAAGACCACGTTCTGCAGCTGTTTGGCGTCCGGTTGTTAGGTATTACTCCGGA
GAACGGCAAAAAGCTGCTAATGAGCGTGGTCTTCCTGTTTGTCCTTTTCACCCTGAACCGGATTCTCCGCGCCGTCTCCG
CGGCAGCGCTGGGCACCAAGACCGGGCCCGCCCGTTTTTGGGCCAAGCAGGTCATCAGAATTGCCACGGCCGTTCTGCTG
ATCACCGGCATGCTTTCGATATGGTTCAACGACCCGGGGAGATTGGCTAACGCGGCAGCATTTGTCACGGCCGGCCTCGC
GATTGCCTCGCAGAGAGTAATCACGGCGATTTCCGCGTACTTGATTATTCTTCGCGGCAAGACCTTCCACGTCGGCGATC
GGATTGTTATGGGCGGTGTGCGTGGCGATGTGATCGCACTAGGATTCATCCAGACCACCATCATGGAGATGGGGCAAGCG
CCGCCGGAACAATCGGACGCTCCTTCTGTATGGGTTGCCGGCAGGCAGTATACCGGCCGAATCGTGACCGTCTCGAACGA
CAAAATTTTCGATGAGCCCGTCTACAATTACACTCGCGATTTTCCGTACATCTGGGAAGAGATGCGTCTGCCGATTCCCT
ACTCCGGAGATCGGAACCGGGCGGAGGAGATAATTCTACACGCCGCGCAACGCCACACCACGAAGGTCGCCGAACTGAGT
GAGGATGCGCTCACCGAACTCGAGCGCCGCTTCATGGTGAAACGGGAGAGCTTGAATCCGCGGGTCTATTTCCGGTTGAC
CGACAACTGGGTGGAGATGTCGGTTCGCTTCATCACCGAAGATCATGGGATCCGTCACGTGAAAGACGCCATGAGCCGAG
AAATTCTGGACGAATTCGATCAGGCCCACATCAGCATCGCGTCGGGTACCTATGAAATCGTCGGTCTCCCGGAAGTGAAA
GTCCACCTCGACCGGTGA

Upstream 100 bases:

>100_bases
CAGACCGAAGGTCAGTTTGGAATGACGAAGCCGAGCCGCAAGGGGCAATTCGAAAGCGCCGGCAATGCACCGCTGATCAA
GAAATGATGCCCGCCGCATC

Downstream 100 bases:

>100_bases
GCGAGCGGTCGATTCGAGTAAGGACCTCTATTTGCGGGGGGCGCCCGCCAGGCTGACACCCCCCGGCAAAGCGGAACTAA
CTGCGGGTAGTACGGTTAGT

Product: mechanosensitive ion channel MscS

Products: NA

Alternate protein names: Mechanosensitive Ion Channel MscS; Mechanosensitive Ion Channel Family Protein; Mscs Mechanosensitive Ion Channel; Mechanosensitive Ion Channel Protein; Mechanosensitive Ion Channel Membrane Protein; Integral Membrane Protein; Transporter MscS Family; Mechanosensitive Ion Channel Protein MscS; Mechanosensitive Ion Channel; Small-Conductance Mechanosensitive Ion Channel; Small Conductance Mechanosensitive Ion Channel

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MNSIIQFSGKDHVLQLFGVRLLGITPENGKKLLMSVVFLFVLFTLNRILRAVSAAALGTKTGPARFWAKQVIRIATAVLL
ITGMLSIWFNDPGRLANAAAFVTAGLAIASQRVITAISAYLIILRGKTFHVGDRIVMGGVRGDVIALGFIQTTIMEMGQA
PPEQSDAPSVWVAGRQYTGRIVTVSNDKIFDEPVYNYTRDFPYIWEEMRLPIPYSGDRNRAEEIILHAAQRHTTKVAELS
EDALTELERRFMVKRESLNPRVYFRLTDNWVEMSVRFITEDHGIRHVKDAMSREILDEFDQAHISIASGTYEIVGLPEVK
VHLDR

Sequences:

>Translated_325_residues
MNSIIQFSGKDHVLQLFGVRLLGITPENGKKLLMSVVFLFVLFTLNRILRAVSAAALGTKTGPARFWAKQVIRIATAVLL
ITGMLSIWFNDPGRLANAAAFVTAGLAIASQRVITAISAYLIILRGKTFHVGDRIVMGGVRGDVIALGFIQTTIMEMGQA
PPEQSDAPSVWVAGRQYTGRIVTVSNDKIFDEPVYNYTRDFPYIWEEMRLPIPYSGDRNRAEEIILHAAQRHTTKVAELS
EDALTELERRFMVKRESLNPRVYFRLTDNWVEMSVRFITEDHGIRHVKDAMSREILDEFDQAHISIASGTYEIVGLPEVK
VHLDR
>Mature_325_residues
MNSIIQFSGKDHVLQLFGVRLLGITPENGKKLLMSVVFLFVLFTLNRILRAVSAAALGTKTGPARFWAKQVIRIATAVLL
ITGMLSIWFNDPGRLANAAAFVTAGLAIASQRVITAISAYLIILRGKTFHVGDRIVMGGVRGDVIALGFIQTTIMEMGQA
PPEQSDAPSVWVAGRQYTGRIVTVSNDKIFDEPVYNYTRDFPYIWEEMRLPIPYSGDRNRAEEIILHAAQRHTTKVAELS
EDALTELERRFMVKRESLNPRVYFRLTDNWVEMSVRFITEDHGIRHVKDAMSREILDEFDQAHISIASGTYEIVGLPEVK
VHLDR

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36530; Mature: 36530

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS00027 HOMEOBOX_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIIQFSGKDHVLQLFGVRLLGITPENGKKLLMSVVFLFVLFTLNRILRAVSAAALGTK
CCCEEEECCCHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TGPARFWAKQVIRIATAVLLITGMLSIWFNDPGRLANAAAFVTAGLAIASQRVITAISAY
CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIILRGKTFHVGDRIVMGGVRGDVIALGFIQTTIMEMGQAPPEQSDAPSVWVAGRQYTGR
HHEEECCEEECCCEEEECCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCEEEECCEECCE
IVTVSNDKIFDEPVYNYTRDFPYIWEEMRLPIPYSGDRNRAEEIILHAAQRHTTKVAELS
EEEEECCCCCCCCHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EDALTELERRFMVKRESLNPRVYFRLTDNWVEMSVRFITEDHGIRHVKDAMSREILDEFD
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHH
QAHISIASGTYEIVGLPEVKVHLDR
HHEEEEECCCEEEEECCEEEEEECC
>Mature Secondary Structure
MNSIIQFSGKDHVLQLFGVRLLGITPENGKKLLMSVVFLFVLFTLNRILRAVSAAALGTK
CCCEEEECCCHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TGPARFWAKQVIRIATAVLLITGMLSIWFNDPGRLANAAAFVTAGLAIASQRVITAISAY
CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIILRGKTFHVGDRIVMGGVRGDVIALGFIQTTIMEMGQAPPEQSDAPSVWVAGRQYTGR
HHEEECCEEECCCEEEECCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCEEEECCEECCE
IVTVSNDKIFDEPVYNYTRDFPYIWEEMRLPIPYSGDRNRAEEIILHAAQRHTTKVAELS
EEEEECCCCCCCCHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EDALTELERRFMVKRESLNPRVYFRLTDNWVEMSVRFITEDHGIRHVKDAMSREILDEFD
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHH
QAHISIASGTYEIVGLPEVKVHLDR
HHEEEEECCCEEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA