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The map label for this gene is 116620710

Identifier: 116620710

GI number: 116620710

Start: 1951451

End: 1952245

Strand: Reverse

Name: 116620710

Synonym: Acid_1590

Alternate gene names: NA

Gene position: 1952245-1951451 (Counterclockwise)

Preceding gene: 116620712

Following gene: 116620708

Centisome position: 19.59

GC content: 63.4

Gene sequence:

>795_bases
ATGTCCACGCTTCGCATCCTCGTCTATGTGGTGTTGCTTTTCGCCATGGTTCCTGCGCTTGCACGGTCGCAGGACGCAGA
GCAGCTGTTTCGCGACGGGGAACGCCTCTTCGCCGAGCACAGCTTTGAGGCCGCAATTGCAGCCTTTCAGCGGTCCGCGG
AGCTGCGGCCGGAGTATGCGCCCGGCTGGAAAGCGCTCGGAGTTGTATACGCGTCGCGCGGGGATTTTGACCGCGCTGAG
ACGCCGTTTCGTAACGCCTGTGAACGTCAGCCTTCGCTCCCCGATGCGTGCCTCTACTATGGCCGCACGCTGTACCTGCT
CAATCGATTCCAAGCCGCGATCCCTGTACTGCAAAGGACACTGCAGCGGGAACCGCGCAATGCCGAAGGGTACCGCCTTC
TCGCCCTGAGCCTCGAAGGACTGGGACGTGCTGCCGAAGCCGGCGACGCATTCCGCCAATCCCTCAACCTCAATCGCCGC
TCCTCGCCCGATGAAGACCCAGGCATCGACTACGGTGTATTCCTCACTCGTCAGGGACATCCCGAGCAGGCAATCGGCCC
GCTCGAAGACGCGCTTAAGCGCCATCCCGATTCCGCCCGTGGGCATCTCGAACTCGGCTGCACCCTGCTGGAACTCGATC
GCCTCGCCGAGGCAGCCGATCAGCTCGAAAAGTCCATCGCGCTGGATCCCCGGGCGCCCCGCGCTCACCTGCTGCTCGGC
AAAGTCTACCTTCGCCTTGGCAGGACGGAAGCCGCCGAAGAGCACCTGCGTCAGGGCTCGCGCACCGTCAAATAA

Upstream 100 bases:

>100_bases
GCTTTTGGAAATGAAACAGAATTTATGTACGCGCTTGCGTAGAACCTATTAACGTTAAATTCCAGATTTCATAGATGTGC
TAGATTCAAGTGCGGACCAC

Downstream 100 bases:

>100_bases
CGATCCGCCGCCACTTCGCCTAGTTGCTGGACCGTGCCGGAAGGCCAGTGGACCTCAACCGTCGCGCGCGCAGCGGCGCC
GAGTCCGAAGTGAACCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_1 Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family; O-Linked N-Acetylglucosamine Transferase; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Domain-Containing Protein; O-Linked GlcNAc Transferase; Glycosyl Transferase Family Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MSTLRILVYVVLLFAMVPALARSQDAEQLFRDGERLFAEHSFEAAIAAFQRSAELRPEYAPGWKALGVVYASRGDFDRAE
TPFRNACERQPSLPDACLYYGRTLYLLNRFQAAIPVLQRTLQREPRNAEGYRLLALSLEGLGRAAEAGDAFRQSLNLNRR
SSPDEDPGIDYGVFLTRQGHPEQAIGPLEDALKRHPDSARGHLELGCTLLELDRLAEAADQLEKSIALDPRAPRAHLLLG
KVYLRLGRTEAAEEHLRQGSRTVK

Sequences:

>Translated_264_residues
MSTLRILVYVVLLFAMVPALARSQDAEQLFRDGERLFAEHSFEAAIAAFQRSAELRPEYAPGWKALGVVYASRGDFDRAE
TPFRNACERQPSLPDACLYYGRTLYLLNRFQAAIPVLQRTLQREPRNAEGYRLLALSLEGLGRAAEAGDAFRQSLNLNRR
SSPDEDPGIDYGVFLTRQGHPEQAIGPLEDALKRHPDSARGHLELGCTLLELDRLAEAADQLEKSIALDPRAPRAHLLLG
KVYLRLGRTEAAEEHLRQGSRTVK
>Mature_263_residues
STLRILVYVVLLFAMVPALARSQDAEQLFRDGERLFAEHSFEAAIAAFQRSAELRPEYAPGWKALGVVYASRGDFDRAET
PFRNACERQPSLPDACLYYGRTLYLLNRFQAAIPVLQRTLQREPRNAEGYRLLALSLEGLGRAAEAGDAFRQSLNLNRRS
SPDEDPGIDYGVFLTRQGHPEQAIGPLEDALKRHPDSARGHLELGCTLLELDRLAEAADQLEKSIALDPRAPRAHLLLGK
VYLRLGRTEAAEEHLRQGSRTVK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29535; Mature: 29404

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLRILVYVVLLFAMVPALARSQDAEQLFRDGERLFAEHSFEAAIAAFQRSAELRPEYA
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PGWKALGVVYASRGDFDRAETPFRNACERQPSLPDACLYYGRTLYLLNRFQAAIPVLQRT
CCHHHHHHHEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LQREPRNAEGYRLLALSLEGLGRAAEAGDAFRQSLNLNRRSSPDEDPGIDYGVFLTRQGH
HHCCCCCCCCEEEEEEEHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCC
PEQAIGPLEDALKRHPDSARGHLELGCTLLELDRLAEAADQLEKSIALDPRAPRAHLLLG
CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
KVYLRLGRTEAAEEHLRQGSRTVK
HHHHHHCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STLRILVYVVLLFAMVPALARSQDAEQLFRDGERLFAEHSFEAAIAAFQRSAELRPEYA
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PGWKALGVVYASRGDFDRAETPFRNACERQPSLPDACLYYGRTLYLLNRFQAAIPVLQRT
CCHHHHHHHEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LQREPRNAEGYRLLALSLEGLGRAAEAGDAFRQSLNLNRRSSPDEDPGIDYGVFLTRQGH
HHCCCCCCCCEEEEEEEHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCC
PEQAIGPLEDALKRHPDSARGHLELGCTLLELDRLAEAADQLEKSIALDPRAPRAHLLLG
CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
KVYLRLGRTEAAEEHLRQGSRTVK
HHHHHHCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA