| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is cocE [H]
Identifier: 116620702
GI number: 116620702
Start: 1941128
End: 1943092
Strand: Direct
Name: cocE [H]
Synonym: Acid_1582
Alternate gene names: 116620702
Gene position: 1941128-1943092 (Clockwise)
Preceding gene: 116620695
Following gene: 116620707
Centisome position: 19.48
GC content: 60.56
Gene sequence:
>1965_bases ATGAAGTTTCACCCACTCTGTAAGAGCCGGCTGTTAAAGGGCGGCGTGTCGCTCCTGCTGATCGGCGGCTTCGCAGCCAG CGTCGCGCAACAGCGGCCCGCACCGAATCCGCAAATGATCGCGGCGCGCAACGCCAGCGAGAAGGAACTCGAAGATCTGG CGATTATCGATCGCAAGCTGATGGTTCCGATGCGCGATGGCAAACGCATGGCGACCGACGTTTATCGTCCCAAGGACACT TCGAAGAAGTATCCGATCATTTTCGTGCGGACTCCTTACAACTTCAACTTTTGGGATGTCCGCAACGGAGCGCCGCGCGA CATGAGCGCGGAGGTGGCGGCGGTCAAGCGCGGGTACGCGTACGTCGAGATGAACGAGCGCGGCCACTTCTTTTCGGAGG GGACTTACGACATTCTCGGCGCACCGCTGACGGATGGCACCGATGCGATCACGTGGATGTCGTCGCAGCCGTGGTCCAAC GGCAAGGTCGGGACGATCGGCTGCTCGTCCACGGCGGAGTGGCAGATGGGCGTGGCGGCGCAGGGCAATCCGGCGTTCGC GGCCATGATCCCGCAGGGTTTCGGCGCGGGTGTCGGCAGGGTTGCGCCGTACTTCGAGCAGGGCAACTGGTATCGCGGGG GCGCGGTGCAAATGCTGTTCATCGCGTGGCTGTATGGAGAGCAGAACCAGGTGCGGCCGATGTTCCCGCCCAACACCTCG CAGGCGGATTTGATCAAAGCGTCGAAGCTATTCGACCTGGCGCCGCAGATGCCGCCGGTGGATTGGTCGAAGGCGCTGCA AATGCTTCCGGTCGCGGACATCATGAAGAAGGTGGATGGTCCCGCGGGAATTTTCGCGGACCGCGCGGAAGTTTCCACCG GCGGCGCGATGATCAAACGAACACCCAACGATCCGGCGTGGTATCGCGGCGGATTGTGGCACGACGATATGAAGATCAAC GTGCCCGGCTTCTGGTTCATGTCCTGGTACGACGTTTCGGTGGGGCCGAACCTCGCCGCCTATAATTACGTGCGCGCCAC TGCCAAGCCGGAGATCGGCAAGCAGCAGTACGCCGTGATTGCTCCGACGCTGCATTGCTCTTACAAGCGAGCGACCGAGC ACACGATGGTGGGCGAGCGCGATATGGGCGATGCCCGCCTGGACTACGACGAGCTGACTTACGGCTGGTTCGATCACTTC CTTAAGGGCGAAGATAACAAGGTGCTGGAAACGATGCCGCGCGTTCGTTACTACACGATGGGGATGAACAAGTGGCAATC CTCGGAGACCTGGCCGCCGGCGGGAGCGCGGCCGATGAAGCTCTTCCTGGGGAGCGCCGGAAAGGCGAATACGGGCAAGG GTGACGGGGCTCTCGCGACTGCGGTGCCCTCTGCCGACAGCCCCGATTCGTTTACGTACGATCCGATGAATCCCGTGCCC TCGTACGGCGGAAACGTCTGCTGCACGGGGAACGCGGTGCAAGGCGGCGCTTTCGATCAGCGCAAGATGGAAGAGCGGCC GGACATTCTGGTGTACACGTCGGACCCTTTGAAAGAGGGCATTGAAGCCAGTGGTCCGATCCAAGCGACGCTTTATGTAT CGTCCGACGCGAAGGACACGGATATTACGGTCAAGTTGATCGACGTGCTTCCCGACGGCACGGCGTACAACCTGGATGAG ACGATCCAGCGCCTGCGGTATCGCGAGGGCTATGACAAACCGCCGGTGTGGATGGAGAACGGCAAGGTGTACAAAGTGAC GCTGCAGCCGATGAATACGAGTAACTTCTTCGCGGTTGGACACCGCATTCGGATTGAAGTATCGAGCAGCAATTTTCCGC GCTTCGACCGGAATTTGAATACCGGCGGGAATAACTACGATGAGGCGAAGGGGGTGGTGGCGCATACCGTGATCCATCAC TCGGCAACTTATCCGTCACAGGTGACGTTGACGGTGGTGAAGTAG
Upstream 100 bases:
>100_bases TCGCCAGAACACTTCACGTTTCACCTGCGCTGTGTTCGTGTACTCGCAATCGGAGCACGTGAAAACGGTACACTGGCTAT TTCCCGAGGAGACCTGCGAA
Downstream 100 bases:
>100_bases GTGCGTCTCCGCGGAAGCCGCCTGAAAGGCAGCTGCAGCCAGGATTGGCTGCCCCACAAGTCGGCAAGCAACGGACGCTC CCTTACTTACGGTCGCGGCT
Product: X-Pro dipeptidyl-peptidase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 654; Mature: 654
Protein sequence:
>654_residues MKFHPLCKSRLLKGGVSLLLIGGFAASVAQQRPAPNPQMIAARNASEKELEDLAIIDRKLMVPMRDGKRMATDVYRPKDT SKKYPIIFVRTPYNFNFWDVRNGAPRDMSAEVAAVKRGYAYVEMNERGHFFSEGTYDILGAPLTDGTDAITWMSSQPWSN GKVGTIGCSSTAEWQMGVAAQGNPAFAAMIPQGFGAGVGRVAPYFEQGNWYRGGAVQMLFIAWLYGEQNQVRPMFPPNTS QADLIKASKLFDLAPQMPPVDWSKALQMLPVADIMKKVDGPAGIFADRAEVSTGGAMIKRTPNDPAWYRGGLWHDDMKIN VPGFWFMSWYDVSVGPNLAAYNYVRATAKPEIGKQQYAVIAPTLHCSYKRATEHTMVGERDMGDARLDYDELTYGWFDHF LKGEDNKVLETMPRVRYYTMGMNKWQSSETWPPAGARPMKLFLGSAGKANTGKGDGALATAVPSADSPDSFTYDPMNPVP SYGGNVCCTGNAVQGGAFDQRKMEERPDILVYTSDPLKEGIEASGPIQATLYVSSDAKDTDITVKLIDVLPDGTAYNLDE TIQRLRYREGYDKPPVWMENGKVYKVTLQPMNTSNFFAVGHRIRIEVSSSNFPRFDRNLNTGGNNYDEAKGVVAHTVIHH SATYPSQVTLTVVK
Sequences:
>Translated_654_residues MKFHPLCKSRLLKGGVSLLLIGGFAASVAQQRPAPNPQMIAARNASEKELEDLAIIDRKLMVPMRDGKRMATDVYRPKDT SKKYPIIFVRTPYNFNFWDVRNGAPRDMSAEVAAVKRGYAYVEMNERGHFFSEGTYDILGAPLTDGTDAITWMSSQPWSN GKVGTIGCSSTAEWQMGVAAQGNPAFAAMIPQGFGAGVGRVAPYFEQGNWYRGGAVQMLFIAWLYGEQNQVRPMFPPNTS QADLIKASKLFDLAPQMPPVDWSKALQMLPVADIMKKVDGPAGIFADRAEVSTGGAMIKRTPNDPAWYRGGLWHDDMKIN VPGFWFMSWYDVSVGPNLAAYNYVRATAKPEIGKQQYAVIAPTLHCSYKRATEHTMVGERDMGDARLDYDELTYGWFDHF LKGEDNKVLETMPRVRYYTMGMNKWQSSETWPPAGARPMKLFLGSAGKANTGKGDGALATAVPSADSPDSFTYDPMNPVP SYGGNVCCTGNAVQGGAFDQRKMEERPDILVYTSDPLKEGIEASGPIQATLYVSSDAKDTDITVKLIDVLPDGTAYNLDE TIQRLRYREGYDKPPVWMENGKVYKVTLQPMNTSNFFAVGHRIRIEVSSSNFPRFDRNLNTGGNNYDEAKGVVAHTVIHH SATYPSQVTLTVVK >Mature_654_residues MKFHPLCKSRLLKGGVSLLLIGGFAASVAQQRPAPNPQMIAARNASEKELEDLAIIDRKLMVPMRDGKRMATDVYRPKDT SKKYPIIFVRTPYNFNFWDVRNGAPRDMSAEVAAVKRGYAYVEMNERGHFFSEGTYDILGAPLTDGTDAITWMSSQPWSN GKVGTIGCSSTAEWQMGVAAQGNPAFAAMIPQGFGAGVGRVAPYFEQGNWYRGGAVQMLFIAWLYGEQNQVRPMFPPNTS QADLIKASKLFDLAPQMPPVDWSKALQMLPVADIMKKVDGPAGIFADRAEVSTGGAMIKRTPNDPAWYRGGLWHDDMKIN VPGFWFMSWYDVSVGPNLAAYNYVRATAKPEIGKQQYAVIAPTLHCSYKRATEHTMVGERDMGDARLDYDELTYGWFDHF LKGEDNKVLETMPRVRYYTMGMNKWQSSETWPPAGARPMKLFLGSAGKANTGKGDGALATAVPSADSPDSFTYDPMNPVP SYGGNVCCTGNAVQGGAFDQRKMEERPDILVYTSDPLKEGIEASGPIQATLYVSSDAKDTDITVKLIDVLPDGTAYNLDE TIQRLRYREGYDKPPVWMENGKVYKVTLQPMNTSNFFAVGHRIRIEVSSSNFPRFDRNLNTGGNNYDEAKGVVAHTVIHH SATYPSQVTLTVVK
Specific function: Hydrolyzes cocaine to benzoate and ecgonine methyl ester, endowing the bacteria with the ability to utilize cocaine as a sole source of carbon and energy for growth, as this bacterium lives in the rhizosphere of coca plants [H]
COG id: COG2936
COG function: function code R; Predicted acyl esterases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha/beta hydrolase family. Carboxylesterase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005674 - InterPro: IPR008979 - InterPro: IPR013736 - InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15; PF08530 PepX_C [H]
EC number: NA
Molecular weight: Translated: 72373; Mature: 72373
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFHPLCKSRLLKGGVSLLLIGGFAASVAQQRPAPNPQMIAARNASEKELEDLAIIDRKL CCCCHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHEE MVPMRDGKRMATDVYRPKDTSKKYPIIFVRTPYNFNFWDVRNGAPRDMSAEVAAVKRGYA EEECCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCHHHHHHHCCEE YVEMNERGHFFSEGTYDILGAPLTDGTDAITWMSSQPWSNGKVGTIGCSSTAEWQMGVAA EEEECCCCCEECCCCCEEECCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEEEE QGNPAFAAMIPQGFGAGVGRVAPYFEQGNWYRGGAVQMLFIAWLYGEQNQVRPMFPPNTS CCCCEEEEECCCCCCCCHHHCCCHHHCCCEECCCHHEEEEEEEHCCCCCCCCCCCCCCCC QADLIKASKLFDLAPQMPPVDWSKALQMLPVADIMKKVDGPAGIFADRAEVSTGGAMIKR HHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCEEECCCCCCCCCEEEEE TPNDPAWYRGGLWHDDMKINVPGFWFMSWYDVSVGPNLAAYNYVRATAKPEIGKQQYAVI CCCCCCCCCCCEEECCCEEECCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEE APTLHCSYKRATEHTMVGERDMGDARLDYDELTYGWFDHFLKGEDNKVLETMPRVRYYTM ECEEECCCHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEE GMNKWQSSETWPPAGARPMKLFLGSAGKANTGKGDGALATAVPSADSPDSFTYDPMNPVP CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCC SYGGNVCCTGNAVQGGAFDQRKMEERPDILVYTSDPLKEGIEASGPIQATLYVSSDAKDT CCCCCEEEECCCCCCCCCCHHHHHCCCCEEEEECCHHHHCCCCCCCEEEEEEEECCCCCC DITVKLIDVLPDGTAYNLDETIQRLRYREGYDKPPVWMENGKVYKVTLQPMNTSNFFAVG CEEEEEEEECCCCCEECHHHHHHHHHHHCCCCCCCEEEECCEEEEEEEEECCCCCEEEEC HRIRIEVSSSNFPRFDRNLNTGGNNYDEAKGVVAHTVIHHSATYPSQVTLTVVK EEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCCCCEEEEEEEC >Mature Secondary Structure MKFHPLCKSRLLKGGVSLLLIGGFAASVAQQRPAPNPQMIAARNASEKELEDLAIIDRKL CCCCHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHEE MVPMRDGKRMATDVYRPKDTSKKYPIIFVRTPYNFNFWDVRNGAPRDMSAEVAAVKRGYA EEECCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCHHHHHHHCCEE YVEMNERGHFFSEGTYDILGAPLTDGTDAITWMSSQPWSNGKVGTIGCSSTAEWQMGVAA EEEECCCCCEECCCCCEEECCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEEEE QGNPAFAAMIPQGFGAGVGRVAPYFEQGNWYRGGAVQMLFIAWLYGEQNQVRPMFPPNTS CCCCEEEEECCCCCCCCHHHCCCHHHCCCEECCCHHEEEEEEEHCCCCCCCCCCCCCCCC QADLIKASKLFDLAPQMPPVDWSKALQMLPVADIMKKVDGPAGIFADRAEVSTGGAMIKR HHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCEEECCCCCCCCCEEEEE TPNDPAWYRGGLWHDDMKINVPGFWFMSWYDVSVGPNLAAYNYVRATAKPEIGKQQYAVI CCCCCCCCCCCEEECCCEEECCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEE APTLHCSYKRATEHTMVGERDMGDARLDYDELTYGWFDHFLKGEDNKVLETMPRVRYYTM ECEEECCCHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEE GMNKWQSSETWPPAGARPMKLFLGSAGKANTGKGDGALATAVPSADSPDSFTYDPMNPVP CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCC SYGGNVCCTGNAVQGGAFDQRKMEERPDILVYTSDPLKEGIEASGPIQATLYVSSDAKDT CCCCCEEEECCCCCCCCCCHHHHHCCCCEEEEECCHHHHCCCCCCCEEEEEEEECCCCCC DITVKLIDVLPDGTAYNLDETIQRLRYREGYDKPPVWMENGKVYKVTLQPMNTSNFFAVG CEEEEEEEECCCCCEECHHHHHHHHHHHCCCCCCCEEEECCEEEEEEEEECCCCCEEEEC HRIRIEVSSSNFPRFDRNLNTGGNNYDEAKGVVAHTVIHHSATYPSQVTLTVVK EEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10698749; 11742345; 12369817 [H]