| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620681
Identifier: 116620681
GI number: 116620681
Start: 1919659
End: 1920663
Strand: Reverse
Name: 116620681
Synonym: Acid_1561
Alternate gene names: NA
Gene position: 1920663-1919659 (Counterclockwise)
Preceding gene: 116620682
Following gene: 116620680
Centisome position: 19.27
GC content: 65.17
Gene sequence:
>1005_bases GTGACCCCGGTTCCCCTGGATCTGCCGCTCCGCCCAGCGGAAGCGACGGAATTAGCGAGTCTCATTTTCGAGCACGCCGA GCGGAAGCCGCTCACCGAGGAACTCCGCTATCGCCTTGCCAGTCGAGCCGCGGTATTGAAGCTGCAGTCGGTCACGCCGC ATTTCGGTTCGCTGGAACGCGATCCGGTACACCCGTCGGCCTACTATCTGGCGGTGGATGCGCAGCAGGGGACGCCGCAA TTGCTTTACCTCGCGACGGCCACTGCCCCCACCAGCAGCATCTATCACAAGGCGCTGCTGATCGGACGCATGCGCCGCGC CAATGGTCCGGAGATGGTGATCAACGCCATTCCGTTCGGCCCCTGGGACAGGGAGAACATCGAAACCTTCGCAGCGCGAA TCAATCACGCGTTCTATCCGCAGCCTCAGGGTGGGCGATCTACGATCACGATCGAAGAGGATCCGGCGGCGGCCTTCGCG CTCTTTCGCGCGCTTCAGAAGCGCACCGGCAAGAATTTCGCGGCACTCTCGTGCGATTATCACGCCGCCGTATGGGCGGC GATCCGCACCGGCTGGCGCACCGGCTACACGGTGGGCGCGGATGTGTCGGGGGCGATTCCCGAAGCGGCCTACAGCCGCT ATTCGGTGAACATCCCGGCCACCGCGGAGGGTTGGAAGATCGCCGGGGAGACGCACAGGCAGGTCCGCCGCGTCCGCTCC GCGCGCAAGATTACGAGGGGCTTTGAGTTCGAAGTGATCTTGGATGGCGCGGTCTCCCCTGAGAGGCTGCGCGGCGCGCT GGAGCACCTGCGGGCCGGGTCGCATGCCGCGCAGCTCGCCGGCGGGAGTTGGACCGGCGACGTCGAAGGGATTGCCGCTG TCGCCCGCCAGTTTCAGGTCACGCTGAGTTCGTGCTCTAGCGGTTTCGCGCCCGACCCGGCCCGGTTCAACTACCGGGTC AAGACGGTGGCCGATGCCGAATCCCTCGCCGAAAGATTTTTATGA
Upstream 100 bases:
>100_bases CGATTCAAAGGGCAAGGTTCTCGAGAAATTGGCCGAACCGGCCGATTGGATGGACCCGAAGATGACGCAGTTGATCGACC GGCTGCTGTAGAGTAAGAGC
Downstream 100 bases:
>100_bases TGCCCTACCGCGCAGAGAATTCCGCAAGATGGAAATGGCGTTCCCGAAGAGGGACGGCCGCGTTGGCACGGAGCAAGCCG GCTGAAAGCCGGCTGCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTPVPLDLPLRPAEATELASLIFEHAERKPLTEELRYRLASRAAVLKLQSVTPHFGSLERDPVHPSAYYLAVDAQQGTPQ LLYLATATAPTSSIYHKALLIGRMRRANGPEMVINAIPFGPWDRENIETFAARINHAFYPQPQGGRSTITIEEDPAAAFA LFRALQKRTGKNFAALSCDYHAAVWAAIRTGWRTGYTVGADVSGAIPEAAYSRYSVNIPATAEGWKIAGETHRQVRRVRS ARKITRGFEFEVILDGAVSPERLRGALEHLRAGSHAAQLAGGSWTGDVEGIAAVARQFQVTLSSCSSGFAPDPARFNYRV KTVADAESLAERFL
Sequences:
>Translated_334_residues MTPVPLDLPLRPAEATELASLIFEHAERKPLTEELRYRLASRAAVLKLQSVTPHFGSLERDPVHPSAYYLAVDAQQGTPQ LLYLATATAPTSSIYHKALLIGRMRRANGPEMVINAIPFGPWDRENIETFAARINHAFYPQPQGGRSTITIEEDPAAAFA LFRALQKRTGKNFAALSCDYHAAVWAAIRTGWRTGYTVGADVSGAIPEAAYSRYSVNIPATAEGWKIAGETHRQVRRVRS ARKITRGFEFEVILDGAVSPERLRGALEHLRAGSHAAQLAGGSWTGDVEGIAAVARQFQVTLSSCSSGFAPDPARFNYRV KTVADAESLAERFL >Mature_333_residues TPVPLDLPLRPAEATELASLIFEHAERKPLTEELRYRLASRAAVLKLQSVTPHFGSLERDPVHPSAYYLAVDAQQGTPQL LYLATATAPTSSIYHKALLIGRMRRANGPEMVINAIPFGPWDRENIETFAARINHAFYPQPQGGRSTITIEEDPAAAFAL FRALQKRTGKNFAALSCDYHAAVWAAIRTGWRTGYTVGADVSGAIPEAAYSRYSVNIPATAEGWKIAGETHRQVRRVRSA RKITRGFEFEVILDGAVSPERLRGALEHLRAGSHAAQLAGGSWTGDVEGIAAVARQFQVTLSSCSSGFAPDPARFNYRVK TVADAESLAERFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36527; Mature: 36396
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPVPLDLPLRPAEATELASLIFEHAERKPLTEELRYRLASRAAVLKLQSVTPHFGSLER CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCC DPVHPSAYYLAVDAQQGTPQLLYLATATAPTSSIYHKALLIGRMRRANGPEMVINAIPFG CCCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC PWDRENIETFAARINHAFYPQPQGGRSTITIEEDPAAAFALFRALQKRTGKNFAALSCDY CCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCH HAAVWAAIRTGWRTGYTVGADVSGAIPEAAYSRYSVNIPATAEGWKIAGETHRQVRRVRS HHHHHHHHHHCCCCCEEECCCCCCCCCHHHHCEEEECCCCCCCCCEECCHHHHHHHHHHH ARKITRGFEFEVILDGAVSPERLRGALEHLRAGSHAAQLAGGSWTGDVEGIAAVARQFQV HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHH TLSSCSSGFAPDPARFNYRVKTVADAESLAERFL HHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHCC >Mature Secondary Structure TPVPLDLPLRPAEATELASLIFEHAERKPLTEELRYRLASRAAVLKLQSVTPHFGSLER CCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCC DPVHPSAYYLAVDAQQGTPQLLYLATATAPTSSIYHKALLIGRMRRANGPEMVINAIPFG CCCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC PWDRENIETFAARINHAFYPQPQGGRSTITIEEDPAAAFALFRALQKRTGKNFAALSCDY CCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCH HAAVWAAIRTGWRTGYTVGADVSGAIPEAAYSRYSVNIPATAEGWKIAGETHRQVRRVRS HHHHHHHHHHCCCCCEEECCCCCCCCCHHHHCEEEECCCCCCCCCEECCHHHHHHHHHHH ARKITRGFEFEVILDGAVSPERLRGALEHLRAGSHAAQLAGGSWTGDVEGIAAVARQFQV HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHH TLSSCSSGFAPDPARFNYRVKTVADAESLAERFL HHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA