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The map label for this gene is yneN [H]

Identifier: 116620682

GI number: 116620682

Start: 1920673

End: 1921146

Strand: Reverse

Name: yneN [H]

Synonym: Acid_1562

Alternate gene names: 116620682

Gene position: 1921146-1920673 (Counterclockwise)

Preceding gene: 116620687

Following gene: 116620681

Centisome position: 19.28

GC content: 59.7

Gene sequence:

>474_bases
GTGCTGCTCTCCGTGGTCCTGGTTTTTTTCATTTACTCCGGCATCCACGAGCGCGTTGTCGTCGCGGGTGACAGTGCACC
GGAATTCACCATCCACACCGATAACGGCCGCACCGTAACGCTGCCGAACTTTGGCGGCAAATTGCTGGTCTTGAATTTCT
GGGCCACGTGGTGTCCGCCCTGCGTGCAGGAGACTCCGTCGCTCAGCCAGTTCGCCGCCACGTATGCCGGCAAGGGCGTG
GTTGTCCTCGGCGTGAGTGTGGACCGCGATGAGAAGGCGTACCGCGCCTTCCTGCAGAAATTCAACCCGGCCTTCCTGAC
CGCGCGCGAAGGCAAGCTGCACGAAGACTACGGCACGTTCATGTACCCCGAGACCTACATCATCGATTCAAAGGGCAAGG
TTCTCGAGAAATTGGCCGAACCGGCCGATTGGATGGACCCGAAGATGACGCAGTTGATCGACCGGCTGCTGTAG

Upstream 100 bases:

>100_bases
TGAGTAATTTTTCGACGCCGCGAGGATCTCGGGAGATACAATTAAATTATAGAACGTCATGCAGAACCCCAAGACTGACC
GGCTGCTGCGAGCGGGAATT

Downstream 100 bases:

>100_bases
AGTAAGAGCGTGACCCCGGTTCCCCTGGATCTGCCGCTCCGCCCAGCGGAAGCGACGGAATTAGCGAGTCTCATTTTCGA
GCACGCCGAGCGGAAGCCGC

Product: redoxin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MLLSVVLVFFIYSGIHERVVVAGDSAPEFTIHTDNGRTVTLPNFGGKLLVLNFWATWCPPCVQETPSLSQFAATYAGKGV
VVLGVSVDRDEKAYRAFLQKFNPAFLTAREGKLHEDYGTFMYPETYIIDSKGKVLEKLAEPADWMDPKMTQLIDRLL

Sequences:

>Translated_157_residues
MLLSVVLVFFIYSGIHERVVVAGDSAPEFTIHTDNGRTVTLPNFGGKLLVLNFWATWCPPCVQETPSLSQFAATYAGKGV
VVLGVSVDRDEKAYRAFLQKFNPAFLTAREGKLHEDYGTFMYPETYIIDSKGKVLEKLAEPADWMDPKMTQLIDRLL
>Mature_157_residues
MLLSVVLVFFIYSGIHERVVVAGDSAPEFTIHTDNGRTVTLPNFGGKLLVLNFWATWCPPCVQETPSLSQFAATYAGKGV
VVLGVSVDRDEKAYRAFLQKFNPAFLTAREGKLHEDYGTFMYPETYIIDSKGKVLEKLAEPADWMDPKMTQLIDRLL

Specific function: Involved In Disulfide Bond Formation. Catalyzes A Late, Reductive Step In The Assembly Of Periplasmic C-Type Cytochromes, Probably The Reduction Of Disulfide Bonds Of The Apocytochrome C To Allow Covalent Linkage With The Heme. Possible Subunit Of A Heme

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: NA

Molecular weight: Translated: 17594; Mature: 17594

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSVVLVFFIYSGIHERVVVAGDSAPEFTIHTDNGRTVTLPNFGGKLLVLNFWATWCPP
CHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCEEEECCCCCEEEEEEEHHHHCCH
CVQETPSLSQFAATYAGKGVVVLGVSVDRDEKAYRAFLQKFNPAFLTAREGKLHEDYGTF
HHHCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCE
MYPETYIIDSKGKVLEKLAEPADWMDPKMTQLIDRLL
ECCCEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHC
>Mature Secondary Structure
MLLSVVLVFFIYSGIHERVVVAGDSAPEFTIHTDNGRTVTLPNFGGKLLVLNFWATWCPP
CHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCEEEECCCCCEEEEEEEHHHHCCH
CVQETPSLSQFAATYAGKGVVVLGVSVDRDEKAYRAFLQKFNPAFLTAREGKLHEDYGTF
HHHCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCE
MYPETYIIDSKGKVLEKLAEPADWMDPKMTQLIDRLL
ECCCEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]