| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620670
Identifier: 116620670
GI number: 116620670
Start: 1902025
End: 1903740
Strand: Direct
Name: 116620670
Synonym: Acid_1550
Alternate gene names: NA
Gene position: 1902025-1903740 (Clockwise)
Preceding gene: 116620668
Following gene: 116620672
Centisome position: 19.09
GC content: 60.84
Gene sequence:
>1716_bases ATGGCTGACCATCCACCACCATTCTCTATGCCCGCCGGCGCGGCAAGTTTTGCCGCAACCATGCGGTACCTGGCGGTTGT TTGCCTGCTCCCTTTGATCGTCCTATGGCGCCAGGACAACATACTCTTCACCGGTTCCGGGTACATAGATCCCTGGGTTT ATTGGGGCTATTTCCGTAGCCTGGTGGAGCATAAGCGCAACCTCTTTCCGGGAAGCCAGTTCGGTTCTCAATTGTCCTGG ATCTTGCCCGGGGCTGCGGTCTACAAACTGTTCTCGCCGGTCGCGGCCAACTGCATATTGCATCTCGGTGTGCACACGCT CGCCGGCGTCTCGTTTTTTCTCACGCTCAAGTGGGTGGTGGGAGCGCGGCGGGCTTTGGTGGCGACGATGATATTCTCGC TAAACCCATGGCTCGCGTCCGCGACCGGTTGGGACTATGTGGATGGAATCGGCATCGCCTACTGTCTTCTCACGATTGCC CTGCTCACGTGGGCGGCACTGGTTCCGGTACGCCGCTGGGCTCTCATGGCCGCCGGAATGTCACTGGCAGCCCTAACCTA TTCGAACTCCGACTGGGTGATGCTGACGCCTCTTCTTCCGCTGCTCTATATCGGCTTGACCCGCGTCTGGCACGGAACTC GGCCGGTGCGCTCTTTTTGGGATCTCTGCCGCTGGTTCGGTCCCGGCTGTTTTCTGGCAACCATCGCCTTCTGCGCAATC AACTATCGGCTCGAAGGTCACTACTGGTTCTACACCAGTTCCGCTCTGGCCACCTTCCAACTGAACAGTCGGCCAACGCC ATGGTGGCAGGGCCTGTGGCAGATCAGCGCACCGTCGCCCTGGCTGTTGTTCGCGATTGCTGCAGCGGTCGTTTTGGGAG CGGTCCTGTACGAGGAAAGGTGGAGCGCCTTCCGGGTGAGAACGCCCGCCGCGCTGTTCTCGTGGCTTTTCCTTTTCGCT TTGATATGGATGGCAAGGTGTCAGGTTCGCGGAAGCTTTCTGGGTCTGTCCTACCATGCCAGTATCCTGCTTCCCTTCAG TTTCCTGGTGATCGGCGTCCGGTTCTGGCCGGAGTTGGAAACGGCCAACTGGCGATACTACCTCTTCTTTTGCGGCACAG TGGCGGTAGTGATGGGGTACGCCTGGTCCGCCGAAGGGCCGGGAATGGCCGCCGCTCTTCCATACCCCGTTTGGCTTGGC CTCGCTGCGCTGGCCGCATGCCTCGTGTGGCGACTGGTCCCGGAGAATATCCTCTGCGGTTTGGCCGCCCTCTTTATCTT CACGGCGCTTGGTGTGGCCCATAGCTACGCTGGCATGGATCCCCATGACTCACGCGATCAATACCAGGCACTCTGCCGCG CTCGAGAGCGCGTCGAGACCGTCCGCAACGGCCGGCCTGTTCGCTTCTGGTTCGACAAAGACGATCGCGTTTCTCGGGAC GCCATGGCGTTAGTCTCTGCATACTCCTGGGATAGTCTGCTGAGTCAGAGCGTCGGCACAGCGCCGTGCTTCCCGGAGCA AGCGCCCTCCACGATCATCGTCACGCTCGCTTCGGACCCTTCGCGTGGAGCGGACTTCGCAGCGTCCACGCTCACCGCCT GTTGGAGCGGCAAGGGGCTGCGGGTTGTGCCTCTCGAGACCGACACCATCCCGCGTGGCGCTTCGAGCTATCGTCTCTCA TTTTTCCGGGTCGAACCCGCTCCCGGGACCCATTGA
Upstream 100 bases:
>100_bases CACACGGCTCGCGATGTGACACAAGTCGTGCCGCGGCGAAGCGGTCTTCTCTCGCCGGTCGCGTGCTAGAATTGCAATTC CACAGAGCTTAACGGCCATA
Downstream 100 bases:
>100_bases GTCACCATCCGTGCCGTCACCTCCAGCGGACGCGCTTTAGATTCTCCGGTTCGAAATACGGACTGCACGGGAGTGGATGG TCCCAGCAGTGCATGTTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 571; Mature: 570
Protein sequence:
>571_residues MADHPPPFSMPAGAASFAATMRYLAVVCLLPLIVLWRQDNILFTGSGYIDPWVYWGYFRSLVEHKRNLFPGSQFGSQLSW ILPGAAVYKLFSPVAANCILHLGVHTLAGVSFFLTLKWVVGARRALVATMIFSLNPWLASATGWDYVDGIGIAYCLLTIA LLTWAALVPVRRWALMAAGMSLAALTYSNSDWVMLTPLLPLLYIGLTRVWHGTRPVRSFWDLCRWFGPGCFLATIAFCAI NYRLEGHYWFYTSSALATFQLNSRPTPWWQGLWQISAPSPWLLFAIAAAVVLGAVLYEERWSAFRVRTPAALFSWLFLFA LIWMARCQVRGSFLGLSYHASILLPFSFLVIGVRFWPELETANWRYYLFFCGTVAVVMGYAWSAEGPGMAAALPYPVWLG LAALAACLVWRLVPENILCGLAALFIFTALGVAHSYAGMDPHDSRDQYQALCRARERVETVRNGRPVRFWFDKDDRVSRD AMALVSAYSWDSLLSQSVGTAPCFPEQAPSTIIVTLASDPSRGADFAASTLTACWSGKGLRVVPLETDTIPRGASSYRLS FFRVEPAPGTH
Sequences:
>Translated_571_residues MADHPPPFSMPAGAASFAATMRYLAVVCLLPLIVLWRQDNILFTGSGYIDPWVYWGYFRSLVEHKRNLFPGSQFGSQLSW ILPGAAVYKLFSPVAANCILHLGVHTLAGVSFFLTLKWVVGARRALVATMIFSLNPWLASATGWDYVDGIGIAYCLLTIA LLTWAALVPVRRWALMAAGMSLAALTYSNSDWVMLTPLLPLLYIGLTRVWHGTRPVRSFWDLCRWFGPGCFLATIAFCAI NYRLEGHYWFYTSSALATFQLNSRPTPWWQGLWQISAPSPWLLFAIAAAVVLGAVLYEERWSAFRVRTPAALFSWLFLFA LIWMARCQVRGSFLGLSYHASILLPFSFLVIGVRFWPELETANWRYYLFFCGTVAVVMGYAWSAEGPGMAAALPYPVWLG LAALAACLVWRLVPENILCGLAALFIFTALGVAHSYAGMDPHDSRDQYQALCRARERVETVRNGRPVRFWFDKDDRVSRD AMALVSAYSWDSLLSQSVGTAPCFPEQAPSTIIVTLASDPSRGADFAASTLTACWSGKGLRVVPLETDTIPRGASSYRLS FFRVEPAPGTH >Mature_570_residues ADHPPPFSMPAGAASFAATMRYLAVVCLLPLIVLWRQDNILFTGSGYIDPWVYWGYFRSLVEHKRNLFPGSQFGSQLSWI LPGAAVYKLFSPVAANCILHLGVHTLAGVSFFLTLKWVVGARRALVATMIFSLNPWLASATGWDYVDGIGIAYCLLTIAL LTWAALVPVRRWALMAAGMSLAALTYSNSDWVMLTPLLPLLYIGLTRVWHGTRPVRSFWDLCRWFGPGCFLATIAFCAIN YRLEGHYWFYTSSALATFQLNSRPTPWWQGLWQISAPSPWLLFAIAAAVVLGAVLYEERWSAFRVRTPAALFSWLFLFAL IWMARCQVRGSFLGLSYHASILLPFSFLVIGVRFWPELETANWRYYLFFCGTVAVVMGYAWSAEGPGMAAALPYPVWLGL AALAACLVWRLVPENILCGLAALFIFTALGVAHSYAGMDPHDSRDQYQALCRARERVETVRNGRPVRFWFDKDDRVSRDA MALVSAYSWDSLLSQSVGTAPCFPEQAPSTIIVTLASDPSRGADFAASTLTACWSGKGLRVVPLETDTIPRGASSYRLSF FRVEPAPGTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63510; Mature: 63379
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADHPPPFSMPAGAASFAATMRYLAVVCLLPLIVLWRQDNILFTGSGYIDPWVYWGYFRS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHH LVEHKRNLFPGSQFGSQLSWILPGAAVYKLFSPVAANCILHLGVHTLAGVSFFLTLKWVV HHHHHHHCCCCHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GARRALVATMIFSLNPWLASATGWDYVDGIGIAYCLLTIALLTWAALVPVRRWALMAAGM HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SLAALTYSNSDWVMLTPLLPLLYIGLTRVWHGTRPVRSFWDLCRWFGPGCFLATIAFCAI CEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH NYRLEGHYWFYTSSALATFQLNSRPTPWWQGLWQISAPSPWLLFAIAAAVVLGAVLYEER EEEECCEEEEEECCEEEEEEECCCCCHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHH WSAFRVRTPAALFSWLFLFALIWMARCQVRGSFLGLSYHASILLPFSFLVIGVRFWPELE HHHEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCC TANWRYYLFFCGTVAVVMGYAWSAEGPGMAAALPYPVWLGLAALAACLVWRLVPENILCG CCCEEEEEEEHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH LAALFIFTALGVAHSYAGMDPHDSRDQYQALCRARERVETVRNGRPVRFWFDKDDRVSRD HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH AMALVSAYSWDSLLSQSVGTAPCFPEQAPSTIIVTLASDPSRGADFAASTLTACWSGKGL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCE RVVPLETDTIPRGASSYRLSFFRVEPAPGTH EEEEECCCCCCCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure ADHPPPFSMPAGAASFAATMRYLAVVCLLPLIVLWRQDNILFTGSGYIDPWVYWGYFRS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHH LVEHKRNLFPGSQFGSQLSWILPGAAVYKLFSPVAANCILHLGVHTLAGVSFFLTLKWVV HHHHHHHCCCCHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GARRALVATMIFSLNPWLASATGWDYVDGIGIAYCLLTIALLTWAALVPVRRWALMAAGM HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SLAALTYSNSDWVMLTPLLPLLYIGLTRVWHGTRPVRSFWDLCRWFGPGCFLATIAFCAI CEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH NYRLEGHYWFYTSSALATFQLNSRPTPWWQGLWQISAPSPWLLFAIAAAVVLGAVLYEER EEEECCEEEEEECCEEEEEEECCCCCHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHH WSAFRVRTPAALFSWLFLFALIWMARCQVRGSFLGLSYHASILLPFSFLVIGVRFWPELE HHHEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCC TANWRYYLFFCGTVAVVMGYAWSAEGPGMAAALPYPVWLGLAALAACLVWRLVPENILCG CCCEEEEEEEHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH LAALFIFTALGVAHSYAGMDPHDSRDQYQALCRARERVETVRNGRPVRFWFDKDDRVSRD HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH AMALVSAYSWDSLLSQSVGTAPCFPEQAPSTIIVTLASDPSRGADFAASTLTACWSGKGL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCE RVVPLETDTIPRGASSYRLSFFRVEPAPGTH EEEEECCCCCCCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA