| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620672
Identifier: 116620672
GI number: 116620672
Start: 1905463
End: 1908201
Strand: Direct
Name: 116620672
Synonym: Acid_1552
Alternate gene names: NA
Gene position: 1905463-1908201 (Clockwise)
Preceding gene: 116620670
Following gene: 116620675
Centisome position: 19.12
GC content: 64.8
Gene sequence:
>2739_bases TTGCGCACCCTGTTTCTCTGTCTGATCTCTATCGCTGCCCACGCGGCGACTACCGTCTACCAGGCTTCCGTCGATCAGCT CACCGTCATCCACGGCACAGCCGCCCCGGACGCCGCCGTTCACCACAATGCGCCGAAATCCCTCCGCGTAGAGCCTGGCG GGCAGTATCCCGATGCCATCATTCGTTCCGCGCCCGTCTCCCTCACCATCGGCAAGCGCTATGAGCTCTCCGGCTGGGTG CGCACCGAGAACCTGACCGTCCACGATCTGGACCGCTCGCCCATCGCCACCGGCGCCGCGCTCTCCATGGCGTCCATGCC TTTCGACGTCCACTCCGAATCGCTCGGCGGCACCCGCCCCTGGACGCGCCTCTCGCTCAAGTTCACCGCCACCCGTGCGC AGGATGCCATCCTGCTGGCGGTCGCCAACGGCGGCGGCTTCAGGGGCAAAGCCTGGTTCGAAGGCGTCTCGCTCGACGAG GCATCCTCCAGCGACGCCTGGCCTGCGCGCGACGCCGTCAAGACCCTGGGACCCGCCTACCGCTATCCCAAAGCCGGCTG GACCTACCTCCACATCGAAGGCCAGCCCTATGAACGCGGCTACCAGCACGGCTACCTGATGGCGCGCGAAATCCCCGAGT ACCTGGAGCGCTGCGCCGCCGACCTCGGCACCAATGCCGCCGGCTGGAGCAATCTCCGTACCACCGCCAATGCGCTCTTC CTGCGCGGCTTCGATCGCGAAATCCTGGAGGAAATGCGCGGCATCGCCGATGGCGCGTCCGACGCCGGCATTCAATGGCA GGGACGGCGGCTCGACCTGATCGATATCGTGGTCGCCAATGTCACTGTCGAAATCGGCGAACTGCGCAGCGCCATGACCG TTACTCCCACCGGCCTTGAGCAGTTCAAGTTCGAACCGCCTTCCTACGCCGAGAAGAAGCACGATACCGTGCTCGATCAC TGCAGCGCCTTCGCCGCCACCGGCCCCGCCACGCGCGATGGGAAAATGGTGATCGGCCACGTCACCTGGTGGCCCCTGAC GCTCGCCGAGGGCACCAACGTCTGGCTCGACATCAAGCCCGCCAACGGGCATCGCGTACTCATGCAGAGCTACGCCGGCG GCATCGAGAGCGGCACTGACTGGTATCAGAACGATGCCGGCATGGTGCTCACCGAGACCACCATCCGCCAGACGCCTTTC AACCCGCAGGGTACGCCGGTCGCCTTCCGCGCCCGGATGGCGATTCAATATGCCGGCAACATCGATGAAATGGTGAAGCA GCTCGGCACCCGCAACAACGGTCTCTACACTAACGAGTGGCTGATGGGCGATGGCAAGACCAACGAGATTGCCATGTACG AGCTCGGCACCGCGCACACCAAGCTCTGGCGTAGTGGAAAGAACGAATGGTTCAACAACACGCCCGGCTTCTATTGGGGC AACAACAACGCCAAAGACCTGACCATCCGCACCGAGTACCTGCCCGACCCGCAGGGCCAGCCCGAATACGTCCCCTTCAC GCCCACCGTCCGCGACCTTGCCTGGCAGGATCTCTACAAGAAGTACAACGGCCAGATCGATGAGCAGTTCGCGTATCTCG CCTTCCGCACCGCGCCCCTGGTCAGCGCGAGCACGATGGACGCCAAGGTCATCACCGCCGACATGGCGAAGAACATGATG GTGTGGGCCGCCATCGGCAAGCCCAATCAGCGCGAATGGCTGCCCGGCGGCCGCAGCACTTACGAAAAGAATGACGGCAT CTACCCCAGCGGCTACGCGCTCTTCAGCACCGCGATCGAACAGGACCGCCTCGCGCCCAGGCCCGCTGCCGCCCCCGCGC CGGCTGCGCAGCGCCCCGCCGCCAATAAGCTGAAGGACCGCCTCTGGAAGGGCTGGATCATCCCCGCAGGCGAAGCCGAC ACCTGGTTTGCCGCCGGTTCCACCGCGTATCACAACCTGCTGCAAGCCGAGGACATCGAGAAGGCGATCGACGCGCGCCG CATTGAATACCGCGGCCTGAAACTTGCCGTCGATAACGAGATGACGCGCTTCCGCATGGCGGAGACCAAGGGCGTCCTCT TCCTCGACGGCCTGCGCCGTAAACTCGGCGACGATAAATTCCTCGCGCTAATGCAAAGCTACTTCGACGCCAACACCACG CGCACCGTGACCGCGCAGAGCTTCCTCGAAAAGGCCGGCGTGCCGTTCGAATTTACCGAGCCCGCCGAGGGCCCCGCCTA CTCCGTAAGCGACATCGGCCGCCGCCTCGCCACCGCCGTGCTGGTCTACGGCACGCAGCGCGAAGCCGGCGCCAACCGCT ACGCCGCCGAGCAGCTGCAGTCGTCGTACCTCAACATGTTCGAGAGTCAGGTCCCGATCTATAAGGATTTCGAAGTCACC GACGAACTGCTCGCCCACAAGGACGTGATCTTCGTCGGCCGTCCCGAGGCCAACACTGCGCTCGCCGCCTGGGCGAAATC AATCGGCCTGGATTACGAGGGCGCCATCTTCAAGATCGAAAATCAACTCCACGCCACCGAGCGCGAAGCGCTCACCCTGG CCGCCAAGAATCCGCAGGACCCCAGCCACATGGTCCTGGTGCTGGCCGGCAACGACGCCCTCCGCACCGTAAAACTCGCC ACCTCCGGTGGCGTGCGTTTCGAGCAAACGCCCTACGTGATCACCGGCGATGCCTCTCGCCCCGCCCCTGCCCCCATGGG AGGCCGAAGGCCCCGGTAG
Upstream 100 bases:
>100_bases AGCCCAATATAACAATACCCGCAATCATGCAATATGGATCGGACCCAGTGTGCATTTGGAGCGTCCGATCTTGCTATCCT AAATTCCCAGGAGGGCTCCC
Downstream 100 bases:
>100_bases GACGCCGCGAAGATTCGAGGGCTTGGCTTTGTGGGGCAGGCATTTTGCCTGCAGCCGCCTTTCAGTCGGCTTCTTCGTTC ATGCTCGGCACCCCGCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 912; Mature: 912
Protein sequence:
>912_residues MRTLFLCLISIAAHAATTVYQASVDQLTVIHGTAAPDAAVHHNAPKSLRVEPGGQYPDAIIRSAPVSLTIGKRYELSGWV RTENLTVHDLDRSPIATGAALSMASMPFDVHSESLGGTRPWTRLSLKFTATRAQDAILLAVANGGGFRGKAWFEGVSLDE ASSSDAWPARDAVKTLGPAYRYPKAGWTYLHIEGQPYERGYQHGYLMAREIPEYLERCAADLGTNAAGWSNLRTTANALF LRGFDREILEEMRGIADGASDAGIQWQGRRLDLIDIVVANVTVEIGELRSAMTVTPTGLEQFKFEPPSYAEKKHDTVLDH CSAFAATGPATRDGKMVIGHVTWWPLTLAEGTNVWLDIKPANGHRVLMQSYAGGIESGTDWYQNDAGMVLTETTIRQTPF NPQGTPVAFRARMAIQYAGNIDEMVKQLGTRNNGLYTNEWLMGDGKTNEIAMYELGTAHTKLWRSGKNEWFNNTPGFYWG NNNAKDLTIRTEYLPDPQGQPEYVPFTPTVRDLAWQDLYKKYNGQIDEQFAYLAFRTAPLVSASTMDAKVITADMAKNMM VWAAIGKPNQREWLPGGRSTYEKNDGIYPSGYALFSTAIEQDRLAPRPAAAPAPAAQRPAANKLKDRLWKGWIIPAGEAD TWFAAGSTAYHNLLQAEDIEKAIDARRIEYRGLKLAVDNEMTRFRMAETKGVLFLDGLRRKLGDDKFLALMQSYFDANTT RTVTAQSFLEKAGVPFEFTEPAEGPAYSVSDIGRRLATAVLVYGTQREAGANRYAAEQLQSSYLNMFESQVPIYKDFEVT DELLAHKDVIFVGRPEANTALAAWAKSIGLDYEGAIFKIENQLHATEREALTLAAKNPQDPSHMVLVLAGNDALRTVKLA TSGGVRFEQTPYVITGDASRPAPAPMGGRRPR
Sequences:
>Translated_912_residues MRTLFLCLISIAAHAATTVYQASVDQLTVIHGTAAPDAAVHHNAPKSLRVEPGGQYPDAIIRSAPVSLTIGKRYELSGWV RTENLTVHDLDRSPIATGAALSMASMPFDVHSESLGGTRPWTRLSLKFTATRAQDAILLAVANGGGFRGKAWFEGVSLDE ASSSDAWPARDAVKTLGPAYRYPKAGWTYLHIEGQPYERGYQHGYLMAREIPEYLERCAADLGTNAAGWSNLRTTANALF LRGFDREILEEMRGIADGASDAGIQWQGRRLDLIDIVVANVTVEIGELRSAMTVTPTGLEQFKFEPPSYAEKKHDTVLDH CSAFAATGPATRDGKMVIGHVTWWPLTLAEGTNVWLDIKPANGHRVLMQSYAGGIESGTDWYQNDAGMVLTETTIRQTPF NPQGTPVAFRARMAIQYAGNIDEMVKQLGTRNNGLYTNEWLMGDGKTNEIAMYELGTAHTKLWRSGKNEWFNNTPGFYWG NNNAKDLTIRTEYLPDPQGQPEYVPFTPTVRDLAWQDLYKKYNGQIDEQFAYLAFRTAPLVSASTMDAKVITADMAKNMM VWAAIGKPNQREWLPGGRSTYEKNDGIYPSGYALFSTAIEQDRLAPRPAAAPAPAAQRPAANKLKDRLWKGWIIPAGEAD TWFAAGSTAYHNLLQAEDIEKAIDARRIEYRGLKLAVDNEMTRFRMAETKGVLFLDGLRRKLGDDKFLALMQSYFDANTT RTVTAQSFLEKAGVPFEFTEPAEGPAYSVSDIGRRLATAVLVYGTQREAGANRYAAEQLQSSYLNMFESQVPIYKDFEVT DELLAHKDVIFVGRPEANTALAAWAKSIGLDYEGAIFKIENQLHATEREALTLAAKNPQDPSHMVLVLAGNDALRTVKLA TSGGVRFEQTPYVITGDASRPAPAPMGGRRPR >Mature_912_residues MRTLFLCLISIAAHAATTVYQASVDQLTVIHGTAAPDAAVHHNAPKSLRVEPGGQYPDAIIRSAPVSLTIGKRYELSGWV RTENLTVHDLDRSPIATGAALSMASMPFDVHSESLGGTRPWTRLSLKFTATRAQDAILLAVANGGGFRGKAWFEGVSLDE ASSSDAWPARDAVKTLGPAYRYPKAGWTYLHIEGQPYERGYQHGYLMAREIPEYLERCAADLGTNAAGWSNLRTTANALF LRGFDREILEEMRGIADGASDAGIQWQGRRLDLIDIVVANVTVEIGELRSAMTVTPTGLEQFKFEPPSYAEKKHDTVLDH CSAFAATGPATRDGKMVIGHVTWWPLTLAEGTNVWLDIKPANGHRVLMQSYAGGIESGTDWYQNDAGMVLTETTIRQTPF NPQGTPVAFRARMAIQYAGNIDEMVKQLGTRNNGLYTNEWLMGDGKTNEIAMYELGTAHTKLWRSGKNEWFNNTPGFYWG NNNAKDLTIRTEYLPDPQGQPEYVPFTPTVRDLAWQDLYKKYNGQIDEQFAYLAFRTAPLVSASTMDAKVITADMAKNMM VWAAIGKPNQREWLPGGRSTYEKNDGIYPSGYALFSTAIEQDRLAPRPAAAPAPAAQRPAANKLKDRLWKGWIIPAGEAD TWFAAGSTAYHNLLQAEDIEKAIDARRIEYRGLKLAVDNEMTRFRMAETKGVLFLDGLRRKLGDDKFLALMQSYFDANTT RTVTAQSFLEKAGVPFEFTEPAEGPAYSVSDIGRRLATAVLVYGTQREAGANRYAAEQLQSSYLNMFESQVPIYKDFEVT DELLAHKDVIFVGRPEANTALAAWAKSIGLDYEGAIFKIENQLHATEREALTLAAKNPQDPSHMVLVLAGNDALRTVKLA TSGGVRFEQTPYVITGDASRPAPAPMGGRRPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005079 [H]
Pfam domain/function: PF03417 AAT [H]
EC number: NA
Molecular weight: Translated: 100593; Mature: 100593
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLFLCLISIAAHAATTVYQASVDQLTVIHGTAAPDAAVHHNAPKSLRVEPGGQYPDAI CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCCCEEECCCCCCCHHH IRSAPVSLTIGKRYELSGWVRTENLTVHDLDRSPIATGAALSMASMPFDVHSESLGGTRP HHCCCCEEEECCEEECCCEEEECCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC WTRLSLKFTATRAQDAILLAVANGGGFRGKAWFEGVSLDEASSSDAWPARDAVKTLGPAY CEEEEEEEEEECCCCEEEEEEECCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHCCCHH RYPKAGWTYLHIEGQPYERGYQHGYLMAREIPEYLERCAADLGTNAAGWSNLRTTANALF CCCCCCEEEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHE LRGFDREILEEMRGIADGASDAGIQWQGRRLDLIDIVVANVTVEIGELRSAMTVTPTGLE EECCCHHHHHHHHHHCCCCCCCCEEECCCEEEEEEEEEEHEEEEEHHCCCCEEECCCCHH QFKFEPPSYAEKKHDTVLDHCSAFAATGPATRDGKMVIGHVTWWPLTLAEGTNVWLDIKP HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEECCCEEEEEEEC ANGHRVLMQSYAGGIESGTDWYQNDAGMVLTETTIRQTPFNPQGTPVAFRARMAIQYAGN CCCCEEHHHHHCCCCCCCCCHHCCCCCEEEEECCHHCCCCCCCCCCEEEEEEEEEEECCC IDEMVKQLGTRNNGLYTNEWLMGDGKTNEIAMYELGTAHTKLWRSGKNEWFNNTPGFYWG HHHHHHHHCCCCCCEEECCEEECCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCCEEEC NNNAKDLTIRTEYLPDPQGQPEYVPFTPTVRDLAWQDLYKKYNGQIDEQFAYLAFRTAPL CCCCCEEEEEEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCHHHHHEEEEEECCCC VSASTMDAKVITADMAKNMMVWAAIGKPNQREWLPGGRSTYEKNDGIYPSGYALFSTAIE EECCCCCCEEEEHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH QDRLAPRPAAAPAPAAQRPAANKLKDRLWKGWIIPAGEADTWFAAGSTAYHNLLQAEDIE HHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCEEECCCHHHHHHHHHHHHH KAIDARRIEYRGLKLAVDNEMTRFRMAETKGVLFLDGLRRKLGDDKFLALMQSYFDANTT HHHHHHHEEECCEEEEECCCCHHEEHHHCCCEEEEEHHHHHHCCHHHHHHHHHHHCCCCC RTVTAQSFLEKAGVPFEFTEPAEGPAYSVSDIGRRLATAVLVYGTQREAGANRYAAEQLQ EEEHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHH SSYLNMFESQVPIYKDFEVTDELLAHKDVIFVGRPEANTALAAWAKSIGLDYEGAIFKIE HHHHHHHHHCCCCEECCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEC NQLHATEREALTLAAKNPQDPSHMVLVLAGNDALRTVKLATSGGVRFEQTPYVITGDASR CHHHHCCHHEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCCEEECCCEEEECCCCC PAPAPMGGRRPR CCCCCCCCCCCC >Mature Secondary Structure MRTLFLCLISIAAHAATTVYQASVDQLTVIHGTAAPDAAVHHNAPKSLRVEPGGQYPDAI CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCCCEEECCCCCCCHHH IRSAPVSLTIGKRYELSGWVRTENLTVHDLDRSPIATGAALSMASMPFDVHSESLGGTRP HHCCCCEEEECCEEECCCEEEECCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC WTRLSLKFTATRAQDAILLAVANGGGFRGKAWFEGVSLDEASSSDAWPARDAVKTLGPAY CEEEEEEEEEECCCCEEEEEEECCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHCCCHH RYPKAGWTYLHIEGQPYERGYQHGYLMAREIPEYLERCAADLGTNAAGWSNLRTTANALF CCCCCCEEEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHE LRGFDREILEEMRGIADGASDAGIQWQGRRLDLIDIVVANVTVEIGELRSAMTVTPTGLE EECCCHHHHHHHHHHCCCCCCCCEEECCCEEEEEEEEEEHEEEEEHHCCCCEEECCCCHH QFKFEPPSYAEKKHDTVLDHCSAFAATGPATRDGKMVIGHVTWWPLTLAEGTNVWLDIKP HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEECCCEEEEEEEC ANGHRVLMQSYAGGIESGTDWYQNDAGMVLTETTIRQTPFNPQGTPVAFRARMAIQYAGN CCCCEEHHHHHCCCCCCCCCHHCCCCCEEEEECCHHCCCCCCCCCCEEEEEEEEEEECCC IDEMVKQLGTRNNGLYTNEWLMGDGKTNEIAMYELGTAHTKLWRSGKNEWFNNTPGFYWG HHHHHHHHCCCCCCEEECCEEECCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCCEEEC NNNAKDLTIRTEYLPDPQGQPEYVPFTPTVRDLAWQDLYKKYNGQIDEQFAYLAFRTAPL CCCCCEEEEEEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCHHHHHEEEEEECCCC VSASTMDAKVITADMAKNMMVWAAIGKPNQREWLPGGRSTYEKNDGIYPSGYALFSTAIE EECCCCCCEEEEHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH QDRLAPRPAAAPAPAAQRPAANKLKDRLWKGWIIPAGEADTWFAAGSTAYHNLLQAEDIE HHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCEEECCCHHHHHHHHHHHHH KAIDARRIEYRGLKLAVDNEMTRFRMAETKGVLFLDGLRRKLGDDKFLALMQSYFDANTT HHHHHHHEEECCEEEEECCCCHHEEHHHCCCEEEEEHHHHHHCCHHHHHHHHHHHCCCCC RTVTAQSFLEKAGVPFEFTEPAEGPAYSVSDIGRRLATAVLVYGTQREAGANRYAAEQLQ EEEHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHH SSYLNMFESQVPIYKDFEVTDELLAHKDVIFVGRPEANTALAAWAKSIGLDYEGAIFKIE HHHHHHHHHCCCCEECCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEC NQLHATEREALTLAAKNPQDPSHMVLVLAGNDALRTVKLATSGGVRFEQTPYVITGDASR CHHHHCCHHEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCCEEECCCEEEECCCCC PAPAPMGGRRPR CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]