Click here to switch to the map view.

The map label for this gene is 116620649

Identifier: 116620649

GI number: 116620649

Start: 1875146

End: 1875892

Strand: Reverse

Name: 116620649

Synonym: Acid_1529

Alternate gene names: NA

Gene position: 1875892-1875146 (Counterclockwise)

Preceding gene: 116620653

Following gene: 116620644

Centisome position: 18.82

GC content: 59.44

Gene sequence:

>747_bases
ATGTGCAAGATGAGCGCGCTCAGAGAACGGGTTCTTTCACTTCAATTGCCAGAGGAAACTATCCGCCGGCAATTGCTCGA
GATTCAGCAGGGAGTCCTGGCCAATTCGCGCTACATCAACGCACTCAACTTCGACGCCATCCACCCGCGCGACCTGCGCT
ACCTCTTCGACGAATACGACGCGCGTTTTTTGGGCGGACTGTGCAAGCCGGCGCTGGATGGCCGGCTCGATCTCAAGTTC
TCGGACCGTATGACCGTTAGAGGCGGAATCACCAAGCGCATTGAGAAGCACAGCGGGGAGGTTCGCTTCGAGGTCATGAT
CGCCAGCGCAATACTGTTCGATGGCTTTCGTGAACCCGGCCAGGGCGCTACCGCCTGCGGCCTGGAATGCGCCCACCGGA
TGGATGCGTTGCAACGCATCTTCGAACATGAATTGGTTCACCTGCTGGAGTTTCTCTGCTGGGAAACCAGCGATTGCGCC
AAACCGCGATTTCAGGAGATTTCCGGGAGAATGTTCCTGCATCGCGCGCACACGCACTCGCTCATGACGCGGCGCGCGAT
GGCCGCGAAATCCGGCATCGTGCGCGGCTCGCTGGTGACCTTCCCCTTTCAGGGCCGCCAGCTTTCGGGACGCGTGGCAC
GCATTTCCAAACGCGCCACGGTGCTGGTCGAAGACCCGAACGGACCGCGATACACCGATGGCAAGCACTACGAGAAGTAC
TCCGTTCCCATTTCGGCGCTGAAGTAA

Upstream 100 bases:

>100_bases
GGGTGACCTCGGTGCCCACCCCGTCGCCGGCGATCACGCCAATCGTAAAAGTCTTCATGTCTCGAAGACAATTGTACCGG
GAGGGGGTGGTTTTGCGAAA

Downstream 100 bases:

>100_bases
ACTCTAACCGCCCGCGTCCGCGGCGGGGATCTTGCGGACCTCGTCCCACGGGAGAACGTTGCAGCGCTCCGCCCAACGGT
CGTAACGGCCCACCATGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MCKMSALRERVLSLQLPEETIRRQLLEIQQGVLANSRYINALNFDAIHPRDLRYLFDEYDARFLGGLCKPALDGRLDLKF
SDRMTVRGGITKRIEKHSGEVRFEVMIASAILFDGFREPGQGATACGLECAHRMDALQRIFEHELVHLLEFLCWETSDCA
KPRFQEISGRMFLHRAHTHSLMTRRAMAAKSGIVRGSLVTFPFQGRQLSGRVARISKRATVLVEDPNGPRYTDGKHYEKY
SVPISALK

Sequences:

>Translated_248_residues
MCKMSALRERVLSLQLPEETIRRQLLEIQQGVLANSRYINALNFDAIHPRDLRYLFDEYDARFLGGLCKPALDGRLDLKF
SDRMTVRGGITKRIEKHSGEVRFEVMIASAILFDGFREPGQGATACGLECAHRMDALQRIFEHELVHLLEFLCWETSDCA
KPRFQEISGRMFLHRAHTHSLMTRRAMAAKSGIVRGSLVTFPFQGRQLSGRVARISKRATVLVEDPNGPRYTDGKHYEKY
SVPISALK
>Mature_248_residues
MCKMSALRERVLSLQLPEETIRRQLLEIQQGVLANSRYINALNFDAIHPRDLRYLFDEYDARFLGGLCKPALDGRLDLKF
SDRMTVRGGITKRIEKHSGEVRFEVMIASAILFDGFREPGQGATACGLECAHRMDALQRIFEHELVHLLEFLCWETSDCA
KPRFQEISGRMFLHRAHTHSLMTRRAMAAKSGIVRGSLVTFPFQGRQLSGRVARISKRATVLVEDPNGPRYTDGKHYEKY
SVPISALK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28281; Mature: 28281

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS00028 ZINC_FINGER_C2H2_1 ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKMSALRERVLSLQLPEETIRRQLLEIQQGVLANSRYINALNFDAIHPRDLRYLFDEYD
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH
ARFLGGLCKPALDGRLDLKFSDRMTVRGGITKRIEKHSGEVRFEVMIASAILFDGFREPG
HHHHHHHCCCCCCCEEEEEECCCEEECCCHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCC
QGATACGLECAHRMDALQRIFEHELVHLLEFLCWETSDCAKPRFQEISGRMFLHRAHTHS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHEEHHHHHHH
LMTRRAMAAKSGIVRGSLVTFPFQGRQLSGRVARISKRATVLVEDPNGPRYTDGKHYEKY
HHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCCCEEE
SVPISALK
CCCHHHCC
>Mature Secondary Structure
MCKMSALRERVLSLQLPEETIRRQLLEIQQGVLANSRYINALNFDAIHPRDLRYLFDEYD
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH
ARFLGGLCKPALDGRLDLKFSDRMTVRGGITKRIEKHSGEVRFEVMIASAILFDGFREPG
HHHHHHHCCCCCCCEEEEEECCCEEECCCHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCC
QGATACGLECAHRMDALQRIFEHELVHLLEFLCWETSDCAKPRFQEISGRMFLHRAHTHS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHEEHHHHHHH
LMTRRAMAAKSGIVRGSLVTFPFQGRQLSGRVARISKRATVLVEDPNGPRYTDGKHYEKY
HHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCCCEEE
SVPISALK
CCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA