| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620653
Identifier: 116620653
GI number: 116620653
Start: 1878963
End: 1881647
Strand: Reverse
Name: 116620653
Synonym: Acid_1533
Alternate gene names: NA
Gene position: 1881647-1878963 (Counterclockwise)
Preceding gene: 116620655
Following gene: 116620649
Centisome position: 18.88
GC content: 63.31
Gene sequence:
>2685_bases ATGTTAAAGGCGACGATATCGTTTGCGGCCGTAGTGTTTCTGGCGCCGGCCTATGCTCAAAAGGGCTATGAATTCTGGCC CGGCATCACGTACGACGCCAACATCCCCACGCTGCGCAAGGTGCTTGGCTATGACCCCGGCGACAAGGTCACCAGCCATG CGGGCATTGTGCAGTACATGAATGCGCTTGCCGGCGCGGCTCCGACGCGCATGAAGGTTTTCGAGTACGGCGAAAGCTGG GAAGGACGGAAGCTGATCTACGCTGCCATCGGCAGCGAGGCCAACATTCGTAAACTCGGCGAGACCAAGAGCGGCATTCA GCGGCTTGCCGACCCTCGCAAGACGACGGAGGCGGAGGCGCGCAAGTTGATCGCGGGGCTGCCGGCGGTGGTCTGGCTCT CATACGGCGTTCACGGCAACGAGATCTCTTCGCCCGAAGCGGCGCTGCTCACGGCCTGGCACCTGCTGGCGGCGCGCCAC GACAAGCTGGTGGATGATGTGCTGGAGAAGGTGGTGGTGCTGATCGACCCGATCCAGAATCCGGATGGACGGGATCGGTT CGTCAACTACTTTGAGCAGACGCGCGGACTCGCTCCGGATGCAAGTCCACTGGCGGCCGAGCACAACGAGCCGTGGCCCG GCGGTCGCGCCAACCACTATCTCTTCGATCTCAACCGCGATTGGATCGGGTTGACGCAGCCGGAGATTGCGAGCCAGGTC AAAATGCTGCGCGAATGGCTGCCGCTGGTCTACGTGGACCTGCACGAAATGAGCGGCGAGAGCACGTACTTCTTCACGCC CGAATCCGACCCGTATAATCCCAACCTGACACCGAATCTGCGGCAAAGCCTGACGCTCTTCGGCAAGAACAACGCGAAAT GGTTCGATAAATACGGCTTCGATTACTTCACGCGCGAGCAGTATGACGCGTTCTATCCGGGCTACGGCGCCAGCTGGCCG CTTTATTACGGCGCGCTGGCGATGACTTACGAACAGGCGTCAGTACGCGGGCTGGCGCTGCGCCGCGCCGACGACACGCT GCTGACCTACCGCGACACGGTACGGCATCATTTCGTGGCGTCGATCTCCACGCTCGAGACGGCGGCGGCGAATCGCGAGA AGCTGCTCACGGACTTCTATCGCTACCGTGCCACCGCGGTGGAGGAAGGGCGGCAGGAAGCGATCAAGGAGTACCTCCTG CCGCGCAGGCGCGACGGGGCTGCCACCGACAAGCTCGCCGGCATCCTGATGGAGCACGGCATCGAGGTCAACCGTGCCAC GGCTCCGTTTCGTGCCGGCGGCAAGGAGTACGCAACGGGGACATACGTGGTGCCGATGGCGCAGCCATCCAAACGTTTGA TCCGCACGCTGCTCGATACGGACACGAAGATGGACGATAAGTTCGTTGCCGCCGAGGAATCACGGCGCAGATTGAAGCAG CGCACCGAGATCTACGACGTCACCGCGTGGAGCCTGCCGCTGCTCTTCAACGTGGAATGCGTCGCGAGCGGCGAGGTTTC CGCGGGCGCGTTCGAGGCTGCGAAACCGGCGCGCATCGCCCCCGGCGAAGTGCACGGCAATCGCGCGAGCGTTGCGTATC TGGTGCCGTGGGGCAGCCAGGCGGCGGGACGGCTGCTCACGGCGGCGCTGCGGCAGGACCTGAAGATCGATTCCAGCGAC AAGCCTTTCGCGCAGAACGGAATCAATTTTCCTGCCGGCAGCCTGATTCTCAAGGCGGCGATCAATCCGGCGGACCTGGG CGACCGAATGACGCGCATGGCGAGGGAGACCGGCGCCGAGGTTTACGCGGCGAACTCTGGTTGGGTGGACGACGGGGTGA ACTTCGGAAGCCGATGGGTGGTGCCGATTAAGAGGCCGGCGATCGCGATCGCGTGGGACACACCGACGCAATCGGCATCG GCCGGCGCGACGCGGTTTATCCTGGAGCGGCAGTACGGTTACCCGGTGACGCCGATCCGGACCGCGCAGCTCGCCGGAGC GGATCTCTCGAAGTTCCAGGTGTTGATCTTGCCTTCGGGCGGCAATTACGCCGCGGTGCTCGGCGAAGGCGGCGTGGAGC GGGTGAAGAACTGGGTGGCGGCCGGCGGGACAATCGTGGCGCTCGGAGACTCGGTCGGATTCCTGGCGAAGGCCGAGTTG ATGGAGATCGCACAGGAGAATGCGCTGGGCGACGGCGAAGAGAAGAAAGGTGACAAGGAGAAGGACGAAAAGGCGGACGG GCGTGTGCCCGGTACCACGATCGCCAGCGAGGCCGAGTTCGACAAGTTGACGCGCGCCAACATGGAATTGCCGGACAGCG TCCCCGGCGCCATCGCCCGCGTAAAAATTAGATCCGACTACTGGCTCACAGCGGGTGCCGCCGATAGCGTTTACACGATG GTGGAGGGTCGGGCAATTTTCGCGCCGCTGAAAGCCGACAAGGGAATCAACGCCGCATATTACGATGCGGCCGACAAGCT GCTGGCGAGCGGGCATCTGTGGGCGGAGAACAAGAAGCAGATGGCGTTTAAACCTGTCGTGGTCTCGGGGACTTCGGGCC GCGGGATTGTGGTGGGGTTCACGCAGGATCCGAGTTTCCGGGCCATCACCGACGGCATGAATCTGCTGTTTTTGAATGCC GTGTTCCGTGGCCCCGCTCACGCACGCGGCGCGGCGACGGAATAG
Upstream 100 bases:
>100_bases CAAACACGGGCGCCAGCAGGGGAAGCAGAAAGCGTACTTTCATATTCACACCGGAAGTTCCGATTTTAGCTCACGGCGGG AACGGTAAACTAGAGGTTTC
Downstream 100 bases:
>100_bases CTATTCGAAGAGCGGCTTGAGGTTCGCGATGCGATCGGTGGGGTAGCCGGAAATCGCGATATGACGGTTGCCGATGCGGT CAACGTAGAGGAAGACGTCC
Product: peptidase M14, carboxypeptidase A
Products: NA
Alternate protein names: Zinc-Dependent Carboxypeptidase Domain-Containing Protein; Zinc Carboxypeptidase; Zinc-Dependent Carboxypeptidase Domain-Conatining Protein; Deacylase/Carboxypeptidase Superfamily Protein; Zinc Carboxypeptidase Family; M14 Family Peptidase
Number of amino acids: Translated: 894; Mature: 894
Protein sequence:
>894_residues MLKATISFAAVVFLAPAYAQKGYEFWPGITYDANIPTLRKVLGYDPGDKVTSHAGIVQYMNALAGAAPTRMKVFEYGESW EGRKLIYAAIGSEANIRKLGETKSGIQRLADPRKTTEAEARKLIAGLPAVVWLSYGVHGNEISSPEAALLTAWHLLAARH DKLVDDVLEKVVVLIDPIQNPDGRDRFVNYFEQTRGLAPDASPLAAEHNEPWPGGRANHYLFDLNRDWIGLTQPEIASQV KMLREWLPLVYVDLHEMSGESTYFFTPESDPYNPNLTPNLRQSLTLFGKNNAKWFDKYGFDYFTREQYDAFYPGYGASWP LYYGALAMTYEQASVRGLALRRADDTLLTYRDTVRHHFVASISTLETAAANREKLLTDFYRYRATAVEEGRQEAIKEYLL PRRRDGAATDKLAGILMEHGIEVNRATAPFRAGGKEYATGTYVVPMAQPSKRLIRTLLDTDTKMDDKFVAAEESRRRLKQ RTEIYDVTAWSLPLLFNVECVASGEVSAGAFEAAKPARIAPGEVHGNRASVAYLVPWGSQAAGRLLTAALRQDLKIDSSD KPFAQNGINFPAGSLILKAAINPADLGDRMTRMARETGAEVYAANSGWVDDGVNFGSRWVVPIKRPAIAIAWDTPTQSAS AGATRFILERQYGYPVTPIRTAQLAGADLSKFQVLILPSGGNYAAVLGEGGVERVKNWVAAGGTIVALGDSVGFLAKAEL MEIAQENALGDGEEKKGDKEKDEKADGRVPGTTIASEAEFDKLTRANMELPDSVPGAIARVKIRSDYWLTAGAADSVYTM VEGRAIFAPLKADKGINAAYYDAADKLLASGHLWAENKKQMAFKPVVVSGTSGRGIVVGFTQDPSFRAITDGMNLLFLNA VFRGPAHARGAATE
Sequences:
>Translated_894_residues MLKATISFAAVVFLAPAYAQKGYEFWPGITYDANIPTLRKVLGYDPGDKVTSHAGIVQYMNALAGAAPTRMKVFEYGESW EGRKLIYAAIGSEANIRKLGETKSGIQRLADPRKTTEAEARKLIAGLPAVVWLSYGVHGNEISSPEAALLTAWHLLAARH DKLVDDVLEKVVVLIDPIQNPDGRDRFVNYFEQTRGLAPDASPLAAEHNEPWPGGRANHYLFDLNRDWIGLTQPEIASQV KMLREWLPLVYVDLHEMSGESTYFFTPESDPYNPNLTPNLRQSLTLFGKNNAKWFDKYGFDYFTREQYDAFYPGYGASWP LYYGALAMTYEQASVRGLALRRADDTLLTYRDTVRHHFVASISTLETAAANREKLLTDFYRYRATAVEEGRQEAIKEYLL PRRRDGAATDKLAGILMEHGIEVNRATAPFRAGGKEYATGTYVVPMAQPSKRLIRTLLDTDTKMDDKFVAAEESRRRLKQ RTEIYDVTAWSLPLLFNVECVASGEVSAGAFEAAKPARIAPGEVHGNRASVAYLVPWGSQAAGRLLTAALRQDLKIDSSD KPFAQNGINFPAGSLILKAAINPADLGDRMTRMARETGAEVYAANSGWVDDGVNFGSRWVVPIKRPAIAIAWDTPTQSAS AGATRFILERQYGYPVTPIRTAQLAGADLSKFQVLILPSGGNYAAVLGEGGVERVKNWVAAGGTIVALGDSVGFLAKAEL MEIAQENALGDGEEKKGDKEKDEKADGRVPGTTIASEAEFDKLTRANMELPDSVPGAIARVKIRSDYWLTAGAADSVYTM VEGRAIFAPLKADKGINAAYYDAADKLLASGHLWAENKKQMAFKPVVVSGTSGRGIVVGFTQDPSFRAITDGMNLLFLNA VFRGPAHARGAATE >Mature_894_residues MLKATISFAAVVFLAPAYAQKGYEFWPGITYDANIPTLRKVLGYDPGDKVTSHAGIVQYMNALAGAAPTRMKVFEYGESW EGRKLIYAAIGSEANIRKLGETKSGIQRLADPRKTTEAEARKLIAGLPAVVWLSYGVHGNEISSPEAALLTAWHLLAARH DKLVDDVLEKVVVLIDPIQNPDGRDRFVNYFEQTRGLAPDASPLAAEHNEPWPGGRANHYLFDLNRDWIGLTQPEIASQV KMLREWLPLVYVDLHEMSGESTYFFTPESDPYNPNLTPNLRQSLTLFGKNNAKWFDKYGFDYFTREQYDAFYPGYGASWP LYYGALAMTYEQASVRGLALRRADDTLLTYRDTVRHHFVASISTLETAAANREKLLTDFYRYRATAVEEGRQEAIKEYLL PRRRDGAATDKLAGILMEHGIEVNRATAPFRAGGKEYATGTYVVPMAQPSKRLIRTLLDTDTKMDDKFVAAEESRRRLKQ RTEIYDVTAWSLPLLFNVECVASGEVSAGAFEAAKPARIAPGEVHGNRASVAYLVPWGSQAAGRLLTAALRQDLKIDSSD KPFAQNGINFPAGSLILKAAINPADLGDRMTRMARETGAEVYAANSGWVDDGVNFGSRWVVPIKRPAIAIAWDTPTQSAS AGATRFILERQYGYPVTPIRTAQLAGADLSKFQVLILPSGGNYAAVLGEGGVERVKNWVAAGGTIVALGDSVGFLAKAEL MEIAQENALGDGEEKKGDKEKDEKADGRVPGTTIASEAEFDKLTRANMELPDSVPGAIARVKIRSDYWLTAGAADSVYTM VEGRAIFAPLKADKGINAAYYDAADKLLASGHLWAENKKQMAFKPVVVSGTSGRGIVVGFTQDPSFRAITDGMNLLFLNA VFRGPAHARGAATE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97896; Mature: 97896
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKATISFAAVVFLAPAYAQKGYEFWPGITYDANIPTLRKVLGYDPGDKVTSHAGIVQYM CCEEHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHH NALAGAAPTRMKVFEYGESWEGRKLIYAAIGSEANIRKLGETKSGIQRLADPRKTTEAEA HHHHCCCCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHCCHHHHHHHHCCCCCCHHHHH RKLIAGLPAVVWLSYGVHGNEISSPEAALLTAWHLLAARHDKLVDDVLEKVVVLIDPIQN HHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC PDGRDRFVNYFEQTRGLAPDASPLAAEHNEPWPGGRANHYLFDLNRDWIGLTQPEIASQV CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHH KMLREWLPLVYVDLHEMSGESTYFFTPESDPYNPNLTPNLRQSLTLFGKNNAKWFDKYGF HHHHHHHCEEEEEHHHCCCCEEEEECCCCCCCCCCCCCCHHHHEEEEECCCCCHHHHCCC DYFTREQYDAFYPGYGASWPLYYGALAMTYEQASVRGLALRRADDTLLTYRDTVRHHFVA CHHHHCCCCCCCCCCCCCCHHHHHHHHEEHHHHHHHEEEEECCCCCHHHHHHHHHHHHHH SISTLETAAANREKLLTDFYRYRATAVEEGRQEAIKEYLLPRRRDGAATDKLAGILMEHG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC IEVNRATAPFRAGGKEYATGTYVVPMAQPSKRLIRTLLDTDTKMDDKFVAAEESRRRLKQ CCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHH RTEIYDVTAWSLPLLFNVECVASGEVSAGAFEAAKPARIAPGEVHGNRASVAYLVPWGSQ HHHEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCH AAGRLLTAALRQDLKIDSSDKPFAQNGINFPAGSLILKAAINPADLGDRMTRMARETGAE HHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHCCCE VYAANSGWVDDGVNFGSRWVVPIKRPAIAIAWDTPTQSASAGATRFILERQYGYPVTPIR EEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCC TAQLAGADLSKFQVLILPSGGNYAAVLGEGGVERVKNWVAAGGTIVALGDSVGFLAKAEL HHHHCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHH MEIAQENALGDGEEKKGDKEKDEKADGRVPGTTIASEAEFDKLTRANMELPDSVPGAIAR HHHHHHCCCCCCHHHCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEE VKIRSDYWLTAGAADSVYTMVEGRAIFAPLKADKGINAAYYDAADKLLASGHLWAENKKQ EEEECCEEEECCCCCCEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEECCCCCC MAFKPVVVSGTSGRGIVVGFTQDPSFRAITDGMNLLFLNAVFRGPAHARGAATE EEEEEEEEECCCCCEEEEEECCCCCCHHHHCCCCEEEHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLKATISFAAVVFLAPAYAQKGYEFWPGITYDANIPTLRKVLGYDPGDKVTSHAGIVQYM CCEEHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHH NALAGAAPTRMKVFEYGESWEGRKLIYAAIGSEANIRKLGETKSGIQRLADPRKTTEAEA HHHHCCCCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHCCHHHHHHHHCCCCCCHHHHH RKLIAGLPAVVWLSYGVHGNEISSPEAALLTAWHLLAARHDKLVDDVLEKVVVLIDPIQN HHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC PDGRDRFVNYFEQTRGLAPDASPLAAEHNEPWPGGRANHYLFDLNRDWIGLTQPEIASQV CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHH KMLREWLPLVYVDLHEMSGESTYFFTPESDPYNPNLTPNLRQSLTLFGKNNAKWFDKYGF HHHHHHHCEEEEEHHHCCCCEEEEECCCCCCCCCCCCCCHHHHEEEEECCCCCHHHHCCC DYFTREQYDAFYPGYGASWPLYYGALAMTYEQASVRGLALRRADDTLLTYRDTVRHHFVA CHHHHCCCCCCCCCCCCCCHHHHHHHHEEHHHHHHHEEEEECCCCCHHHHHHHHHHHHHH SISTLETAAANREKLLTDFYRYRATAVEEGRQEAIKEYLLPRRRDGAATDKLAGILMEHG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC IEVNRATAPFRAGGKEYATGTYVVPMAQPSKRLIRTLLDTDTKMDDKFVAAEESRRRLKQ CCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHH RTEIYDVTAWSLPLLFNVECVASGEVSAGAFEAAKPARIAPGEVHGNRASVAYLVPWGSQ HHHEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCH AAGRLLTAALRQDLKIDSSDKPFAQNGINFPAGSLILKAAINPADLGDRMTRMARETGAE HHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHCCCE VYAANSGWVDDGVNFGSRWVVPIKRPAIAIAWDTPTQSASAGATRFILERQYGYPVTPIR EEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCC TAQLAGADLSKFQVLILPSGGNYAAVLGEGGVERVKNWVAAGGTIVALGDSVGFLAKAEL HHHHCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHH MEIAQENALGDGEEKKGDKEKDEKADGRVPGTTIASEAEFDKLTRANMELPDSVPGAIAR HHHHHHCCCCCCHHHCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEE VKIRSDYWLTAGAADSVYTMVEGRAIFAPLKADKGINAAYYDAADKLLASGHLWAENKKQ EEEECCEEEECCCCCCEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEECCCCCC MAFKPVVVSGTSGRGIVVGFTQDPSFRAITDGMNLLFLNAVFRGPAHARGAATE EEEEEEEEECCCCCEEEEEECCCCCCHHHHCCCCEEEHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA