| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620581
Identifier: 116620581
GI number: 116620581
Start: 1790717
End: 1791958
Strand: Direct
Name: 116620581
Synonym: Acid_1460
Alternate gene names: NA
Gene position: 1790717-1791958 (Clockwise)
Preceding gene: 116620579
Following gene: 116620589
Centisome position: 17.97
GC content: 59.9
Gene sequence:
>1242_bases ATGCCCGAAAACAAGACTCAGTTGAATGTGGTTCTGGTCTGGCCCAGCGATGTACTTGCCGAACGTGAGGCCCTGGAAAA AACCATCATCACCCGGGTCAATAAAGTTGCCGCGGGCTATGGCCTCGATCTTCGCCTGGCCTTCTGGCCGAAGGACGTCG TCCCACGCGCCGATCCCATTGCCGCCGAATGCGTCATCGAAAAAGACCTGCGGTTTGGAGAGTGCGATATCGTCATCGCA GTCCTATGGAAGCGTTTCGGAACCCCCGTGCTCGACGCGCAGTCCGGCACCGAATATGAATTGCGCCTGGCCTACGACGG CTGGGAAAAGCGCCAGACGCCCAGGCTCATCATGCATTACTTCCGCACTCCGAGCGGCGAAATCAGCAGCGCCGAGGAGG CCGAGCAAATCCGCAAGGTGCTCGAATACAAGCGCTCGATTCAGCCCAAGACTCTCTATGGACAGTACAAAAGCGTGAGC GAGTTTGAGGAGATCGTGTTCGGCGATCTCGTCCGCGTCGTGCGCGAGTGGAATCGCGAAGAACAGAAGCCCGGCCAGAC CGAGCCGCCGCCACCGGAAATCGCCACCCATCAAGGTTGGGAGAAACAGACCCTCGGCAACTCTCCCCTGTACACTTTCT GCGGCTACCAGAAGGAATTGCGCGACGAGGACTCATTCCAGAATTTCGCCATCGAGCGTCAACCATCCTTCAGGAATCCG AATCCCGTGTCCCACTTGTGGGCCGATTCCTACCGCAGCAGCTGGATTCAGGCGCGCGTCGTCGAAGCCGGAGGTGCCCA CCTCGCCGTCAGCTTCTTCAATGGCCCGGAAAGCTGGCCTTGCAGTCTGGCCATCCGCCCGATTCGTGAACTAGCCGTCG CTACCAAAAATCGCAAACACATCCGCTTCGAAGCCCAACTCGCACCCGATAGCGATCTCGCCGAAGCCTGCATCGCCGTG CGCGTTGTCAACGCCTGGTATCAGCACTGGGCTTATGGACCCGGCGGCGGAACCTACTCCTTGCAGAAAATTACCCGCGA TCCAGACCCGGTAACTATCTCAGTCCCGCTCGACGGCCGCTGGTGGCTGTTCCCCGCCGACGGCAATCACACCTATGGAC CTCCCGGCTTTGACTACCGCGTCATCGCCTCCATCATTCTGGAATTCGGCGGCCCCGCCAGCCAGATTCCCGGCCCGGGA AAAGGCACCGTGCTCCTCCGCGACGTCCGTCTGACCAGGTAA
Upstream 100 bases:
>100_bases TTTCAGCCGGCTTGCCCCGCGCCAACGCGTCCGCCCCTCTTCGGAAACGCAATCCCCAGCTTTCGGTCGTGCCCCCTCGC GATTCGGATATCCTACCTCT
Downstream 100 bases:
>100_bases AGGAACCGGCTCACAGCGATTGGCGCAGACGCTGCTCCACCGGTCCGCGATAGGTTCGGCTCAACCGGACCCGTTTCCCG CTCTTCAGGATCACCTCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MPENKTQLNVVLVWPSDVLAEREALEKTIITRVNKVAAGYGLDLRLAFWPKDVVPRADPIAAECVIEKDLRFGECDIVIA VLWKRFGTPVLDAQSGTEYELRLAYDGWEKRQTPRLIMHYFRTPSGEISSAEEAEQIRKVLEYKRSIQPKTLYGQYKSVS EFEEIVFGDLVRVVREWNREEQKPGQTEPPPPEIATHQGWEKQTLGNSPLYTFCGYQKELRDEDSFQNFAIERQPSFRNP NPVSHLWADSYRSSWIQARVVEAGGAHLAVSFFNGPESWPCSLAIRPIRELAVATKNRKHIRFEAQLAPDSDLAEACIAV RVVNAWYQHWAYGPGGGTYSLQKITRDPDPVTISVPLDGRWWLFPADGNHTYGPPGFDYRVIASIILEFGGPASQIPGPG KGTVLLRDVRLTR
Sequences:
>Translated_413_residues MPENKTQLNVVLVWPSDVLAEREALEKTIITRVNKVAAGYGLDLRLAFWPKDVVPRADPIAAECVIEKDLRFGECDIVIA VLWKRFGTPVLDAQSGTEYELRLAYDGWEKRQTPRLIMHYFRTPSGEISSAEEAEQIRKVLEYKRSIQPKTLYGQYKSVS EFEEIVFGDLVRVVREWNREEQKPGQTEPPPPEIATHQGWEKQTLGNSPLYTFCGYQKELRDEDSFQNFAIERQPSFRNP NPVSHLWADSYRSSWIQARVVEAGGAHLAVSFFNGPESWPCSLAIRPIRELAVATKNRKHIRFEAQLAPDSDLAEACIAV RVVNAWYQHWAYGPGGGTYSLQKITRDPDPVTISVPLDGRWWLFPADGNHTYGPPGFDYRVIASIILEFGGPASQIPGPG KGTVLLRDVRLTR >Mature_412_residues PENKTQLNVVLVWPSDVLAEREALEKTIITRVNKVAAGYGLDLRLAFWPKDVVPRADPIAAECVIEKDLRFGECDIVIAV LWKRFGTPVLDAQSGTEYELRLAYDGWEKRQTPRLIMHYFRTPSGEISSAEEAEQIRKVLEYKRSIQPKTLYGQYKSVSE FEEIVFGDLVRVVREWNREEQKPGQTEPPPPEIATHQGWEKQTLGNSPLYTFCGYQKELRDEDSFQNFAIERQPSFRNPN PVSHLWADSYRSSWIQARVVEAGGAHLAVSFFNGPESWPCSLAIRPIRELAVATKNRKHIRFEAQLAPDSDLAEACIAVR VVNAWYQHWAYGPGGGTYSLQKITRDPDPVTISVPLDGRWWLFPADGNHTYGPPGFDYRVIASIILEFGGPASQIPGPGK GTVLLRDVRLTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46808; Mature: 46677
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPENKTQLNVVLVWPSDVLAEREALEKTIITRVNKVAAGYGLDLRLAFWPKDVVPRADPI CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC AAECVIEKDLRFGECDIVIAVLWKRFGTPVLDAQSGTEYELRLAYDGWEKRQTPRLIMHY HHHHEECCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCEEEEEEECCCCCCCCHHHHHHH FRTPSGEISSAEEAEQIRKVLEYKRSIQPKTLYGQYKSVSEFEEIVFGDLVRVVREWNRE HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCHH EQKPGQTEPPPPEIATHQGWEKQTLGNSPLYTFCGYQKELRDEDSFQNFAIERQPSFRNP HCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEECCCHHHHCCCCCHHHEEEECCCCCCCC NPVSHLWADSYRSSWIQARVVEAGGAHLAVSFFNGPESWPCSLAIRPIRELAVATKNRKH CCHHHHHHHHHHHHHHEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCE IRFEAQLAPDSDLAEACIAVRVVNAWYQHWAYGPGGGTYSLQKITRDPDPVTISVPLDGR EEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHCCCCCCEEEEEECCCE WWLFPADGNHTYGPPGFDYRVIASIILEFGGPASQIPGPGKGTVLLRDVRLTR EEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure PENKTQLNVVLVWPSDVLAEREALEKTIITRVNKVAAGYGLDLRLAFWPKDVVPRADPI CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC AAECVIEKDLRFGECDIVIAVLWKRFGTPVLDAQSGTEYELRLAYDGWEKRQTPRLIMHY HHHHEECCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCEEEEEEECCCCCCCCHHHHHHH FRTPSGEISSAEEAEQIRKVLEYKRSIQPKTLYGQYKSVSEFEEIVFGDLVRVVREWNRE HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCHH EQKPGQTEPPPPEIATHQGWEKQTLGNSPLYTFCGYQKELRDEDSFQNFAIERQPSFRNP HCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEECCCHHHHCCCCCHHHEEEECCCCCCCC NPVSHLWADSYRSSWIQARVVEAGGAHLAVSFFNGPESWPCSLAIRPIRELAVATKNRKH CCHHHHHHHHHHHHHHEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCE IRFEAQLAPDSDLAEACIAVRVVNAWYQHWAYGPGGGTYSLQKITRDPDPVTISVPLDGR EEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHCCCCCCEEEEEECCCE WWLFPADGNHTYGPPGFDYRVIASIILEFGGPASQIPGPGKGTVLLRDVRLTR EEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA