| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is macB [H]
Identifier: 116620589
GI number: 116620589
Start: 1798060
End: 1800600
Strand: Direct
Name: macB [H]
Synonym: Acid_1468
Alternate gene names: 116620589
Gene position: 1798060-1800600 (Clockwise)
Preceding gene: 116620581
Following gene: 116620592
Centisome position: 18.04
GC content: 66.35
Gene sequence:
>2541_bases ATGGTGAAAGAGCAGACCCGCGAAGCCTCGATCCTGAGCTGGCTGGAAGGACTGTTCCAGGACGCCGGCTATACGCTCCG CACTTTCCGCAAGGCGCGCGCCGTCTGCGCCCTGATCGTCTTTCTCCTCGCCCTTGGCGTAGGCGCCAACACCGCGATTT TCAGCATCGCCCACGCGCTCCTCTTGCGCACCCTCCCGGTGAAGGATCCCGCCGGCCTGGTCAATCTCAGGTTGGGCAAT TTCATGTCCTGGGGGTACATCGAGGAAGACGAAACCCTCACCTATTCCCTCTGGCAGCAGGTCCTTCAGCGCCAGGACGT CTTCTCCCAACCCTTCGCCTACGCCGATGGCGAATTCGACGTCGTGCTGAACTCCGTCCGCAAGCCGGCCCAGGGTGCCT TCGTGAGCGCGGAGGCCTTCCGCACGCTCGGCATCGAACCTGCCGCCGGCCGGATGTTCGGCCCGGACGACCAGCGCGCC GCCTCGACCCAGCCCGTCGTCGTGATCAGCTATTCCTTGTGGAAACGCGCCTTCGCCGCCGACCCGGCGGCCATCGGACG CACACTCCTGATCGAAAGCAAGCCCTTCACCATCGTTGGCGTGACGCCGTCAAGGTTTTTCGGACTCACCGTCGGACGCC AGGCCGACGTATACATTCCCCTCGACACGGAGCCGTACCTGCGCGGCGCGGAGTCTGCCTTCCTCAACCCGACGCGCTAT TGGATTACGGTCTTCGGCCGCGTCCGCCCGGGTCTCACCCGCGAACAGGCCGCCAACCGCCTCGCCCGGATGTCTCCCCT CGCCATGCAGGCCACCCTGCCCGCCGAACTGCCGCTCCGAGTCCGGCCGCGCTATCTGAAGCAGTCCTTCGTATTCCAAT CCGCGGCTTCGGGTGTCTCCTATGTCCGCGAAACCCTGAAGCCACCGCTCGCGATTCTGTCCGCCATCGCGTTGCTTCTC CTCCTGCTGACCTCGTTCACCGTCGCCAATCTCCTCCTGGCCCGAGCCTCGGCCCGACAGAAGGAAATCGCCGTGCGCAT TGCGCTCGGGGCATCGCGCGGCCGCATCATCCGGCAGCTGGCGCTTGAGGGCTTCGCTCTCGCCTCCGCAGGCGCGGGCG CCGGCCTCCTGCTCTCCCGTGTTTTGGCCGCCTCGCTCGTCCGCATAGCCTCCTCCCCGTCCAACCCCCTCGTCCTCGAC CTGTCGCTCAATGGGGCGGTCTTCGGCTTCGCAGGTGCCGCCGCCGCGCTGAGCGCGATTCTCTTCGGTCTCGCGCCCGC CCTGCGCGCCGCCCACATCGCGCCCGCGGACGCCTTCAAGGGCGGCAGCGCCACCATGTCTTCCTCGGTAATGCGCCTGC GCCGCGCCCTCCTCACCGGCCAGGTCGCGATCACCGTCGTGATGATCGTCGGCGCCATTCTCTTTGGCGCGACCCTCAGG AACCTCCTCACGGTTCAAACGGGCTTCGATCCCAAGAACGTAGTGCTCGCCAACCTGGACCTCCGCCGCACCCGCATTCC CCAAACGGCTCGCGCATCGTTCTATACCCAACTCCTCAACCGCGTCGCTTCGCTGCCCCTGGTCGATTCGGCCAGCCTCT GCTACGTGACCCCGATCTCCGGCAGCACCTGGCAGCACGACGTGCTCGTTGAGAGCCCGGACGGCCGGCAAGCCATCCAC ACCCACTACAACGCGGTCACACCCGCTTTTTTCTCGACCTTCGGGACTCGCGTCCTCGCCGGCCGCGCCTTCAGCGATCG CGATTCATCTGGCGGGTCGCCGGTCGCCGTGGTCAACCAGTCCTTCGCGCGTGCCGCATTTGGAAATGCCAGCCCAATCG GGCGTCGCGTCTCCGATCGCCGTCGCACGCTGGGCGGCACGCAAGCCTCCGACGCGCACACAGTCGAAATCGTCGGCATT GTCGAGGATGCCAAATACCGCAGCCTGCGCGCCGCGGTTCCTCCCACTCTGTATGTCCCCTTCGTTCAAGACCCGGAGTC GCCGCGCTTCGCCGGCGTGGCGCTGCGTACCCACGCTCCCGCGAACCGGATGATCCACGATCTTTCCCTCGTGCTGAGCC AGGAATATCCCGACCTCAGCTTCCAGGTCACCACCCTGCGCGCCCAGGTCGATAGCTCCGTCACCCGCGAGCGTGTCTTC GCCCTGATCTTCGCGCTCTTTGGGGGTCTCGCCCTTTGTCTGGCCGCCACCGGCATATTCGGCGTGCTCTCCTATTTTGT GGAGCAGCGCCGCCCCGAGTTAAGCATTCGGATGGCCCTTGGTGCCACTCCGGCCAACATTCGCACGTTGGTCTACCGCC AAAGCCTGGCCGCCCTCGCCGCGGGCGCCGCCGCCGGATGCCTGTTCACTCTCTGGGCGGCGAAGTTCACCCGCGCCATC CTCTACGGCGTCACGCCGGCACAACCGGAGGTATATGTAGCCGCGATCGCGATCGTCGCCCTGATCGCCGCCATCGCCAC TCTCTTCCCCGCCATCCGCGCATCCCGCGCCCAAGCCCTCGATTCCCTGCGCTGCGAATGA
Upstream 100 bases:
>100_bases AATCGTCATAACCTTCCCATAGAGGTCCCACCCGCCCGCGATAGCCGCACCGCCGGCGGATGCCGGAAAGGACGCCCGCC TGCGACTTGGCAATCTCACG
Downstream 100 bases:
>100_bases GCCGGTTCATCTTTCGAATGCTAGGGAGCCCTCCAGATGTCCGCCCAGCGACCAGCAGCCTGGGGATCCCTCACGTGCGA CCGGCAAGCGCGGCACACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 846; Mature: 846
Protein sequence:
>846_residues MVKEQTREASILSWLEGLFQDAGYTLRTFRKARAVCALIVFLLALGVGANTAIFSIAHALLLRTLPVKDPAGLVNLRLGN FMSWGYIEEDETLTYSLWQQVLQRQDVFSQPFAYADGEFDVVLNSVRKPAQGAFVSAEAFRTLGIEPAAGRMFGPDDQRA ASTQPVVVISYSLWKRAFAADPAAIGRTLLIESKPFTIVGVTPSRFFGLTVGRQADVYIPLDTEPYLRGAESAFLNPTRY WITVFGRVRPGLTREQAANRLARMSPLAMQATLPAELPLRVRPRYLKQSFVFQSAASGVSYVRETLKPPLAILSAIALLL LLLTSFTVANLLLARASARQKEIAVRIALGASRGRIIRQLALEGFALASAGAGAGLLLSRVLAASLVRIASSPSNPLVLD LSLNGAVFGFAGAAAALSAILFGLAPALRAAHIAPADAFKGGSATMSSSVMRLRRALLTGQVAITVVMIVGAILFGATLR NLLTVQTGFDPKNVVLANLDLRRTRIPQTARASFYTQLLNRVASLPLVDSASLCYVTPISGSTWQHDVLVESPDGRQAIH THYNAVTPAFFSTFGTRVLAGRAFSDRDSSGGSPVAVVNQSFARAAFGNASPIGRRVSDRRRTLGGTQASDAHTVEIVGI VEDAKYRSLRAAVPPTLYVPFVQDPESPRFAGVALRTHAPANRMIHDLSLVLSQEYPDLSFQVTTLRAQVDSSVTRERVF ALIFALFGGLALCLAATGIFGVLSYFVEQRRPELSIRMALGATPANIRTLVYRQSLAALAAGAAAGCLFTLWAAKFTRAI LYGVTPAQPEVYVAAIAIVALIAAIATLFPAIRASRAQALDSLRCE
Sequences:
>Translated_846_residues MVKEQTREASILSWLEGLFQDAGYTLRTFRKARAVCALIVFLLALGVGANTAIFSIAHALLLRTLPVKDPAGLVNLRLGN FMSWGYIEEDETLTYSLWQQVLQRQDVFSQPFAYADGEFDVVLNSVRKPAQGAFVSAEAFRTLGIEPAAGRMFGPDDQRA ASTQPVVVISYSLWKRAFAADPAAIGRTLLIESKPFTIVGVTPSRFFGLTVGRQADVYIPLDTEPYLRGAESAFLNPTRY WITVFGRVRPGLTREQAANRLARMSPLAMQATLPAELPLRVRPRYLKQSFVFQSAASGVSYVRETLKPPLAILSAIALLL LLLTSFTVANLLLARASARQKEIAVRIALGASRGRIIRQLALEGFALASAGAGAGLLLSRVLAASLVRIASSPSNPLVLD LSLNGAVFGFAGAAAALSAILFGLAPALRAAHIAPADAFKGGSATMSSSVMRLRRALLTGQVAITVVMIVGAILFGATLR NLLTVQTGFDPKNVVLANLDLRRTRIPQTARASFYTQLLNRVASLPLVDSASLCYVTPISGSTWQHDVLVESPDGRQAIH THYNAVTPAFFSTFGTRVLAGRAFSDRDSSGGSPVAVVNQSFARAAFGNASPIGRRVSDRRRTLGGTQASDAHTVEIVGI VEDAKYRSLRAAVPPTLYVPFVQDPESPRFAGVALRTHAPANRMIHDLSLVLSQEYPDLSFQVTTLRAQVDSSVTRERVF ALIFALFGGLALCLAATGIFGVLSYFVEQRRPELSIRMALGATPANIRTLVYRQSLAALAAGAAAGCLFTLWAAKFTRAI LYGVTPAQPEVYVAAIAIVALIAAIATLFPAIRASRAQALDSLRCE >Mature_846_residues MVKEQTREASILSWLEGLFQDAGYTLRTFRKARAVCALIVFLLALGVGANTAIFSIAHALLLRTLPVKDPAGLVNLRLGN FMSWGYIEEDETLTYSLWQQVLQRQDVFSQPFAYADGEFDVVLNSVRKPAQGAFVSAEAFRTLGIEPAAGRMFGPDDQRA ASTQPVVVISYSLWKRAFAADPAAIGRTLLIESKPFTIVGVTPSRFFGLTVGRQADVYIPLDTEPYLRGAESAFLNPTRY WITVFGRVRPGLTREQAANRLARMSPLAMQATLPAELPLRVRPRYLKQSFVFQSAASGVSYVRETLKPPLAILSAIALLL LLLTSFTVANLLLARASARQKEIAVRIALGASRGRIIRQLALEGFALASAGAGAGLLLSRVLAASLVRIASSPSNPLVLD LSLNGAVFGFAGAAAALSAILFGLAPALRAAHIAPADAFKGGSATMSSSVMRLRRALLTGQVAITVVMIVGAILFGATLR NLLTVQTGFDPKNVVLANLDLRRTRIPQTARASFYTQLLNRVASLPLVDSASLCYVTPISGSTWQHDVLVESPDGRQAIH THYNAVTPAFFSTFGTRVLAGRAFSDRDSSGGSPVAVVNQSFARAAFGNASPIGRRVSDRRRTLGGTQASDAHTVEIVGI VEDAKYRSLRAAVPPTLYVPFVQDPESPRFAGVALRTHAPANRMIHDLSLVLSQEYPDLSFQVTTLRAQVDSSVTRERVF ALIFALFGGLALCLAATGIFGVLSYFVEQRRPELSIRMALGATPANIRTLVYRQSLAALAAGAAAGCLFTLWAAKFTRAI LYGVTPAQPEVYVAAIAIVALIAAIATLFPAIRASRAQALDSLRCE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=323, Percent_Identity=23.8390092879257, Blast_Score=76, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 90818; Mature: 90818
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKEQTREASILSWLEGLFQDAGYTLRTFRKARAVCALIVFLLALGVGANTAIFSIAHAL CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LLRTLPVKDPAGLVNLRLGNFMSWGYIEEDETLTYSLWQQVLQRQDVFSQPFAYADGEFD HHHHCCCCCCCCEEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH VVLNSVRKPAQGAFVSAEAFRTLGIEPAAGRMFGPDDQRAASTQPVVVISYSLWKRAFAA HHHHHHCCCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCC DPAAIGRTLLIESKPFTIVGVTPSRFFGLTVGRQADVYIPLDTEPYLRGAESAFLNPTRY CHHHHCCEEEEECCCEEEEECCHHHHEEEEECCCCEEEEECCCCHHHCCCCHHHCCCCEE WITVFGRVRPGLTREQAANRLARMSPLAMQATLPAELPLRVRPRYLKQSFVFQSAASGVS EEEEEECCCCCCCHHHHHHHHHHCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH YVRETLKPPLAILSAIALLLLLLTSFTVANLLLARASARQKEIAVRIALGASRGRIIRQL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCHHHHHHH ALEGFALASAGAGAGLLLSRVLAASLVRIASSPSNPLVLDLSLNGAVFGFAGAAAALSAI HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEHHHHHHHHHHH LFGLAPALRAAHIAPADAFKGGSATMSSSVMRLRRALLTGQVAITVVMIVGAILFGATLR HHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLLTVQTGFDPKNVVLANLDLRRTRIPQTARASFYTQLLNRVASLPLVDSASLCYVTPIS HHHEEECCCCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC GSTWQHDVLVESPDGRQAIHTHYNAVTPAFFSTFGTRVLAGRAFSDRDSSGGSPVAVVNQ CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHH SFARAAFGNASPIGRRVSDRRRTLGGTQASDAHTVEIVGIVEDAKYRSLRAAVPPTLYVP HHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCHHHHHHHCCCCEEEEE FVQDPESPRFAGVALRTHAPANRMIHDLSLVLSQEYPDLSFQVTTLRAQVDSSVTRERVF ECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHH ALIFALFGGLALCLAATGIFGVLSYFVEQRRPELSIRMALGATPANIRTLVYRQSLAALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH AGAAAGCLFTLWAAKFTRAILYGVTPAQPEVYVAAIAIVALIAAIATLFPAIRASRAQAL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSLRCE HHHCCC >Mature Secondary Structure MVKEQTREASILSWLEGLFQDAGYTLRTFRKARAVCALIVFLLALGVGANTAIFSIAHAL CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LLRTLPVKDPAGLVNLRLGNFMSWGYIEEDETLTYSLWQQVLQRQDVFSQPFAYADGEFD HHHHCCCCCCCCEEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH VVLNSVRKPAQGAFVSAEAFRTLGIEPAAGRMFGPDDQRAASTQPVVVISYSLWKRAFAA HHHHHHCCCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCC DPAAIGRTLLIESKPFTIVGVTPSRFFGLTVGRQADVYIPLDTEPYLRGAESAFLNPTRY CHHHHCCEEEEECCCEEEEECCHHHHEEEEECCCCEEEEECCCCHHHCCCCHHHCCCCEE WITVFGRVRPGLTREQAANRLARMSPLAMQATLPAELPLRVRPRYLKQSFVFQSAASGVS EEEEEECCCCCCCHHHHHHHHHHCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH YVRETLKPPLAILSAIALLLLLLTSFTVANLLLARASARQKEIAVRIALGASRGRIIRQL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCHHHHHHH ALEGFALASAGAGAGLLLSRVLAASLVRIASSPSNPLVLDLSLNGAVFGFAGAAAALSAI HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEHHHHHHHHHHH LFGLAPALRAAHIAPADAFKGGSATMSSSVMRLRRALLTGQVAITVVMIVGAILFGATLR HHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLLTVQTGFDPKNVVLANLDLRRTRIPQTARASFYTQLLNRVASLPLVDSASLCYVTPIS HHHEEECCCCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC GSTWQHDVLVESPDGRQAIHTHYNAVTPAFFSTFGTRVLAGRAFSDRDSSGGSPVAVVNQ CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHH SFARAAFGNASPIGRRVSDRRRTLGGTQASDAHTVEIVGIVEDAKYRSLRAAVPPTLYVP HHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCHHHHHHHCCCCEEEEE FVQDPESPRFAGVALRTHAPANRMIHDLSLVLSQEYPDLSFQVTTLRAQVDSSVTRERVF ECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHH ALIFALFGGLALCLAATGIFGVLSYFVEQRRPELSIRMALGATPANIRTLVYRQSLAALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH AGAAAGCLFTLWAAKFTRAILYGVTPAQPEVYVAAIAIVALIAAIATLFPAIRASRAQAL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSLRCE HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA