Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

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The map label for this gene is 116620438

Identifier: 116620438

GI number: 116620438

Start: 1625558

End: 1625935

Strand: Reverse

Name: 116620438

Synonym: Acid_1316

Alternate gene names: NA

Gene position: 1625935-1625558 (Counterclockwise)

Preceding gene: 116620440

Following gene: 116620437

Centisome position: 16.32

GC content: 54.76

Gene sequence:

>378_bases
ATGGACCAGCGATCTGCCTCAATCGTGCTAATCACCATTCTCGCCCTTATTTCTCCTTCTACCGCACGGGGCGCCGCTGG
ATTCTCTGAGCAAAATAAACAGGAACCTGCCAAGAAAAAATCAGAGCAGGTCACATCGCTCACCGGCTGTGTAGACCAGC
AGGACGGCCAGTACGTAATGGTCGATGACCGCGGCTTGACTGCGATTGCCGACCTGGTCGCCGAGGGCTTCCCCACCGAG
GGGTTTGCCAAACACATGGGCCACAAGGTAACCGTCCGAGGGACAACAACATCGGGTGGTACACACACCATTTTTCACGT
TCGGAGTATCGAAACCCTCAGCGATACATGTGCGCCGCAGCAACAAGGAAAACAATAG

Upstream 100 bases:

>100_bases
AGTGCGGCCTAGTACAAAATCCGCTGTGGTAACCGGTGATTGCGGATAGTGACATCTGGCACGCGAAATGCTGCACATAT
TCGGAAGAGCGCAAATGTAC

Downstream 100 bases:

>100_bases
GCGCTTTTTAGAGCGCGTGGAGGAGACAAAAACATGGCATCCAGTCTGACGGCATTCACGCCACAACCTAAGACACTCGA
AGATCCTCTAGCTCATCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MDQRSASIVLITILALISPSTARGAAGFSEQNKQEPAKKKSEQVTSLTGCVDQQDGQYVMVDDRGLTAIADLVAEGFPTE
GFAKHMGHKVTVRGTTTSGGTHTIFHVRSIETLSDTCAPQQQGKQ

Sequences:

>Translated_125_residues
MDQRSASIVLITILALISPSTARGAAGFSEQNKQEPAKKKSEQVTSLTGCVDQQDGQYVMVDDRGLTAIADLVAEGFPTE
GFAKHMGHKVTVRGTTTSGGTHTIFHVRSIETLSDTCAPQQQGKQ
>Mature_125_residues
MDQRSASIVLITILALISPSTARGAAGFSEQNKQEPAKKKSEQVTSLTGCVDQQDGQYVMVDDRGLTAIADLVAEGFPTE
GFAKHMGHKVTVRGTTTSGGTHTIFHVRSIETLSDTCAPQQQGKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13318; Mature: 13318

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQRSASIVLITILALISPSTARGAAGFSEQNKQEPAKKKSEQVTSLTGCVDQQDGQYVM
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEE
VDDRGLTAIADLVAEGFPTEGFAKHMGHKVTVRGTTTSGGTHTIFHVRSIETLSDTCAPQ
EECCCHHHHHHHHHCCCCCCHHHHHCCCEEEEEECCCCCCCEEEEEEECHHHHHHHCCCH
QQGKQ
HCCCC
>Mature Secondary Structure
MDQRSASIVLITILALISPSTARGAAGFSEQNKQEPAKKKSEQVTSLTGCVDQQDGQYVM
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEE
VDDRGLTAIADLVAEGFPTEGFAKHMGHKVTVRGTTTSGGTHTIFHVRSIETLSDTCAPQ
EECCCHHHHHHHHHCCCCCCHHHHHCCCEEEEEECCCCCCCEEEEEEECHHHHHHHCCCH
QQGKQ
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA