| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620435
Identifier: 116620435
GI number: 116620435
Start: 1622409
End: 1623773
Strand: Direct
Name: 116620435
Synonym: Acid_1313
Alternate gene names: NA
Gene position: 1622409-1623773 (Clockwise)
Preceding gene: 116620434
Following gene: 116620436
Centisome position: 16.28
GC content: 67.18
Gene sequence:
>1365_bases ATGACGAAGCGCCTGGATCAAGGGCGGGGATTCCAAGTGCTCCGGGATCGCTCCCTAACGGTCGCGGCTCTGTTTTTTGC GGCAGTGAGTTCCTCGTTTGGACAAGTCGTATTGGTGCTGCCGGATGGCGCGCCGGCGCCAGGGTTGTACGATCTTGGGG CGGTCGATAGCGGGCAGATTGCGACGGCCCGGTTCCGGCTGCGCAACACCTCGGCGGGCGCCGCCACGGTGAGCAGTCTG AGTGTCGCCGGGGTGGGATTCGGCGTGAACGCGCCCTCGACGCCATTCGGCATTCCGGCGCTGGACGCGGTCGATTTCAC GATCAACTTTCAGGCCACCGGCGCCGGCAGTTACAGCGCGGCACTGCGTGCGGATGGGATCGCGATCCTGCTCACGGCCT CGGTCCTGCCGAGCCTGACCTATCGCGCCGATGGCGCCAATGGGCTGGTGCTGCTTACCGGGCTCGATTTCGGCGCGGTG GTGCGCGGCACAGCCGCGCAGCGGCGGGTCACGGTCCGCAATGAGACCTCGGTGATCCTCAACATTCCGGCGATCTCGGT GCAGGGTGAGGGCTTTACGCTGGCTGCGGGCGCGCCCTTCGGACAGATTCTGCAGCCGCAGCAGGGCGGGGAATTCAATG TCGTGTTCAGCCCACTGGCGACGGGCGCGGGCCAGGGCACACTGGTGATCGGCGGACGCACGTTCCCGCTCTCGGGCACG GGTACCGAGCCGCCGCTGCCGAAGGTCTCGCTCGCGATCGACCTTCAGCCGGTGGCCAGCGCGCGGCAGGGGAACATCGT GATCCGCTTCGATGCTCCGGCGCAGACCACCGGGATGGGAACGGCGACGCTGGAGTTCGGCGGGTCCGCCGACGCGGCGA TCGCGTTCGCCTCAGGCGGCCGCACTGCGACATTCGCGATTGCGTCCGGCGACACCCAGGCGGTGCTTGGCTTCCAGACC GGAACCAGTGCGGGTACGATTACCTTCAGCGTGCAACTGGGGCAATCGACCGAGAGGCAGAGCGTCGCGATCCCGGCGGC CAAGCCCACCGTCACGGCGAGTGCCGGCGTGCGCTCCAGCGGGGCTGTTGAGGTCCGCGTGACCGGCTTCGACAATACGC GCACGCTCGGCGGACTTGTGTTTACCTTTTACGATGGGGCGGGGAAGACGCTGGCTTCGGTCCCCGACGACGCGGCCGCG GACTTCGCCAGGTTCTTCGCTGCGTCCGACCTGGGCGGCGTGTTTCAGCTGCGGGCCATCTTCCCGGTCGGCGGAGATGC GTCGCAGATCAGCTCTTGCGACGTCACGCTTGCCAACTCGGCGGGCACCACCATACAACGGATCGCGACATTCAGTATCC TGTAA
Upstream 100 bases:
>100_bases TGGCATCGCAGGGCGGCTCCACCGCGCGGACGGAGGCTGCCCCACCTGTGGTTCCACCGGCCCTGACCATCGGCACACCC GTGATCACGGTGGGCAAGCC
Downstream 100 bases:
>100_bases CGCATGAAGCTTCGTGCTCTTGCGGTTGCCATTCTGCCAGCGCTGCTGTGCGGTGCGGACCTGGATTCCACTATCGCCGA ACGCATGCAGGCATTGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MTKRLDQGRGFQVLRDRSLTVAALFFAAVSSSFGQVVLVLPDGAPAPGLYDLGAVDSGQIATARFRLRNTSAGAATVSSL SVAGVGFGVNAPSTPFGIPALDAVDFTINFQATGAGSYSAALRADGIAILLTASVLPSLTYRADGANGLVLLTGLDFGAV VRGTAAQRRVTVRNETSVILNIPAISVQGEGFTLAAGAPFGQILQPQQGGEFNVVFSPLATGAGQGTLVIGGRTFPLSGT GTEPPLPKVSLAIDLQPVASARQGNIVIRFDAPAQTTGMGTATLEFGGSADAAIAFASGGRTATFAIASGDTQAVLGFQT GTSAGTITFSVQLGQSTERQSVAIPAAKPTVTASAGVRSSGAVEVRVTGFDNTRTLGGLVFTFYDGAGKTLASVPDDAAA DFARFFAASDLGGVFQLRAIFPVGGDASQISSCDVTLANSAGTTIQRIATFSIL
Sequences:
>Translated_454_residues MTKRLDQGRGFQVLRDRSLTVAALFFAAVSSSFGQVVLVLPDGAPAPGLYDLGAVDSGQIATARFRLRNTSAGAATVSSL SVAGVGFGVNAPSTPFGIPALDAVDFTINFQATGAGSYSAALRADGIAILLTASVLPSLTYRADGANGLVLLTGLDFGAV VRGTAAQRRVTVRNETSVILNIPAISVQGEGFTLAAGAPFGQILQPQQGGEFNVVFSPLATGAGQGTLVIGGRTFPLSGT GTEPPLPKVSLAIDLQPVASARQGNIVIRFDAPAQTTGMGTATLEFGGSADAAIAFASGGRTATFAIASGDTQAVLGFQT GTSAGTITFSVQLGQSTERQSVAIPAAKPTVTASAGVRSSGAVEVRVTGFDNTRTLGGLVFTFYDGAGKTLASVPDDAAA DFARFFAASDLGGVFQLRAIFPVGGDASQISSCDVTLANSAGTTIQRIATFSIL >Mature_453_residues TKRLDQGRGFQVLRDRSLTVAALFFAAVSSSFGQVVLVLPDGAPAPGLYDLGAVDSGQIATARFRLRNTSAGAATVSSLS VAGVGFGVNAPSTPFGIPALDAVDFTINFQATGAGSYSAALRADGIAILLTASVLPSLTYRADGANGLVLLTGLDFGAVV RGTAAQRRVTVRNETSVILNIPAISVQGEGFTLAAGAPFGQILQPQQGGEFNVVFSPLATGAGQGTLVIGGRTFPLSGTG TEPPLPKVSLAIDLQPVASARQGNIVIRFDAPAQTTGMGTATLEFGGSADAAIAFASGGRTATFAIASGDTQAVLGFQTG TSAGTITFSVQLGQSTERQSVAIPAAKPTVTASAGVRSSGAVEVRVTGFDNTRTLGGLVFTFYDGAGKTLASVPDDAAAD FARFFAASDLGGVFQLRAIFPVGGDASQISSCDVTLANSAGTTIQRIATFSIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45771; Mature: 45640
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRLDQGRGFQVLRDRSLTVAALFFAAVSSSFGQVVLVLPDGAPAPGLYDLGAVDSGQI CCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEECCCCCCCCE ATARFRLRNTSAGAATVSSLSVAGVGFGVNAPSTPFGIPALDAVDFTINFQATGAGSYSA EEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEE ALRADGIAILLTASVLPSLTYRADGANGLVLLTGLDFGAVVRGTAAQRRVTVRNETSVIL EEECCCEEEEEEEHHHCCEEEEECCCCCEEEEEECCCCCEEECCCHHEEEEEECCCEEEE NIPAISVQGEGFTLAAGAPFGQILQPQQGGEFNVVFSPLATGAGQGTLVIGGRTFPLSGT ECCEEEECCCCEEEECCCCHHHHCCCCCCCEEEEEEECCCCCCCCCEEEECCEEEECCCC GTEPPLPKVSLAIDLQPVASARQGNIVIRFDAPAQTTGMGTATLEFGGSADAAIAFASGG CCCCCCCEEEEEEEECHHCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCC RTATFAIASGDTQAVLGFQTGTSAGTITFSVQLGQSTERQSVAIPAAKPTVTASAGVRSS CEEEEEEECCCCEEEEEEECCCCCEEEEEEEEECCCCCCCEEEECCCCCCEEECCCCCCC GAVEVRVTGFDNTRTLGGLVFTFYDGAGKTLASVPDDAAADFARFFAASDLGGVFQLRAI CEEEEEEECCCCCCCCCEEEEEEECCCCCEECCCCCHHHHHHHHHHHHCCCCCEEEEEEE FPVGGDASQISSCDVTLANSAGTTIQRIATFSIL EECCCCHHHCCCCEEEEECCCCCCEEEEEEEECC >Mature Secondary Structure TKRLDQGRGFQVLRDRSLTVAALFFAAVSSSFGQVVLVLPDGAPAPGLYDLGAVDSGQI CCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEECCCCCCCCE ATARFRLRNTSAGAATVSSLSVAGVGFGVNAPSTPFGIPALDAVDFTINFQATGAGSYSA EEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEE ALRADGIAILLTASVLPSLTYRADGANGLVLLTGLDFGAVVRGTAAQRRVTVRNETSVIL EEECCCEEEEEEEHHHCCEEEEECCCCCEEEEEECCCCCEEECCCHHEEEEEECCCEEEE NIPAISVQGEGFTLAAGAPFGQILQPQQGGEFNVVFSPLATGAGQGTLVIGGRTFPLSGT ECCEEEECCCCEEEECCCCHHHHCCCCCCCEEEEEEECCCCCCCCCEEEECCEEEECCCC GTEPPLPKVSLAIDLQPVASARQGNIVIRFDAPAQTTGMGTATLEFGGSADAAIAFASGG CCCCCCCEEEEEEEECHHCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCC RTATFAIASGDTQAVLGFQTGTSAGTITFSVQLGQSTERQSVAIPAAKPTVTASAGVRSS CEEEEEEECCCCEEEEEEECCCCCEEEEEEEEECCCCCCCEEEECCCCCCEEECCCCCCC GAVEVRVTGFDNTRTLGGLVFTFYDGAGKTLASVPDDAAADFARFFAASDLGGVFQLRAI CEEEEEEECCCCCCCCCEEEEEEECCCCCEECCCCCHHHHHHHHHHHHCCCCCEEEEEEE FPVGGDASQISSCDVTLANSAGTTIQRIATFSIL EECCCCHHHCCCCEEEEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA